RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 SIRPB1O00241 398 aa8.18□□□□□ -1.1
CCDC40-212ENST00000574799 HS3ST1O14792 307 aa8.18□□□□□ -1.1
CCDC40-212ENST00000574799 GALR2O43603 387 aaPredicted RBP8.18□□□□□ -1.1
CCDC40-212ENST00000574799 TRAF3IP2O43734 574 aaPredicted RBP8.18□□□□□ -1.1
CCDC40-212ENST00000574799 DEFA4P12838 97 aa8.18□□□□□ -1.1
CCDC40-212ENST00000574799 SLC35B1P78383 322 aa8.18□□□□□ -1.1
CCDC40-212ENST00000574799 ZNF726P1Q15940 193 aa8.18□□□□□ -1.1
CCDC40-212ENST00000574799 OR10P1Q8NGE3 313 aa8.18□□□□□ -1.1
CCDC40-212ENST00000574799 ABHD14BQ96IU4 210 aa8.18□□□□□ -1.1
CCDC40-212ENST00000574799 FAM166BA8MTA8 275 aa8.18□□□□□ -1.1
CCDC40-212ENST00000574799 SPINK2P20155 84 aa8.18□□□□□ -1.1
CCDC40-212ENST00000574799 FBLN7Q53RD9 439 aa8.18□□□□□ -1.1
CCDC40-212ENST00000574799 MRPL52Q86TS9 123 aaKnown RBP8.18□□□□□ -1.1
CCDC40-212ENST00000574799 OR6C1Q96RD1 312 aa8.18□□□□□ -1.1
CCDC40-212ENST00000574799 WDR61Q9GZS3 305 aaKnown RBP8.18□□□□□ -1.1
CCDC40-212ENST00000574799 DSPP15924 2871 aaKnown RBP8.17□□□□□ -1.1
CCDC40-212ENST00000574799 A0A1W2PQD3 144 aa8.17□□□□□ -1.1
CCDC40-212ENST00000574799 M0QZ24 198 aa8.17□□□□□ -1.1
CCDC40-212ENST00000574799 MGST1P10620 155 aaKnown RBP8.17□□□□□ -1.1
CCDC40-212ENST00000574799 CDC34P49427 236 aaPredicted RBP8.17□□□□□ -1.1
CCDC40-212ENST00000574799 PDLIM4P50479 330 aa8.17□□□□□ -1.1
CCDC40-212ENST00000574799 SOX8P57073 446 aa8.17□□□□□ -1.1
CCDC40-212ENST00000574799 SELENOTP62341 195 aa8.17□□□□□ -1.1
CCDC40-212ENST00000574799 ZP4Q12836 540 aa8.17□□□□□ -1.1
CCDC40-212ENST00000574799 UBE2V1Q13404 147 aa8.17□□□□□ -1.1
CCDC40-212ENST00000574799 PRAMEF20Q5VT98 475 aa8.17□□□□□ -1.1
CCDC40-212ENST00000574799 RAET1LQ5VY80 246 aa8.17□□□□□ -1.1
CCDC40-212ENST00000574799 FBXW9Q5XUX1 488 aa8.17□□□□□ -1.1
CCDC40-212ENST00000574799 PRR27Q6MZM9 219 aa8.17□□□□□ -1.1
CCDC40-212ENST00000574799 ZNF525Q8N782 197 aa8.17□□□□□ -1.1
CCDC40-212ENST00000574799 FAM122AQ96E09 287 aa8.17□□□□□ -1.1
CCDC40-212ENST00000574799 LYZL4Q96KX0 146 aa8.17□□□□□ -1.1
CCDC40-212ENST00000574799 PSMG3Q9BT73 122 aaPredicted RBP8.17□□□□□ -1.1
CCDC40-212ENST00000574799 PTRH2Q9Y3E5 179 aaKnown RBP8.17□□□□□ -1.1
CCDC40-212ENST00000574799 TBL2Q9Y4P3 447 aaKnown RBP8.17□□□□□ -1.1
CCDC40-212ENST00000574799 IGHV5-10-1A0A0J9YXX1 117 aa8.17□□□□□ -1.1
CCDC40-212ENST00000574799 NKX6-3A6NJ46 265 aa8.17□□□□□ -1.1
CCDC40-212ENST00000574799 E9PLN8 166 aa8.17□□□□□ -1.1
CCDC40-212ENST00000574799 PATE4P0C8F1 98 aa8.17□□□□□ -1.1
CCDC40-212ENST00000574799 SLC25A6P12236 298 aa8.17□□□□□ -1.1
CCDC40-212ENST00000574799 ANOS1P23352 680 aa8.17□□□□□ -1.1
CCDC40-212ENST00000574799 EPHA8P29322 1005 aaPredicted RBP8.17□□□□□ -1.1
CCDC40-212ENST00000574799 EDDM3BP56851 147 aa8.17□□□□□ -1.1
CCDC40-212ENST00000574799 PDLIM3Q53GG5 364 aaPredicted RBP8.17□□□□□ -1.1
CCDC40-212ENST00000574799 RIPPLY2Q5TAB7 128 aa8.17□□□□□ -1.1
CCDC40-212ENST00000574799 PMS2CLQ68D20 193 aa8.17□□□□□ -1.1
CCDC40-212ENST00000574799 OR4A47Q6IF82 309 aa8.17□□□□□ -1.1
CCDC40-212ENST00000574799 RPP25LQ8N5L8 163 aaKnown RBP8.17□□□□□ -1.1
CCDC40-212ENST00000574799 OR5D13Q8NGL4 314 aa8.17□□□□□ -1.1
CCDC40-212ENST00000574799 OXGR1Q96P68 337 aa8.17□□□□□ -1.1
CCDC40-212ENST00000574799 PYGO2Q9BRQ0 406 aa8.17□□□□□ -1.1
CCDC40-212ENST00000574799 GCM1Q9NP62 436 aa8.17□□□□□ -1.1
CCDC40-212ENST00000574799 ATMQ13315 3056 aa8.17□□□□□ -1.1
CCDC40-212ENST00000574799 C17orf112F2Z3M2 114 aa8.17□□□□□ -1.1
CCDC40-212ENST00000574799 NXPH2O95156 264 aa8.17□□□□□ -1.1
CCDC40-212ENST00000574799 CD99P14209 185 aa8.17□□□□□ -1.1
CCDC40-212ENST00000574799 F2RP25116 425 aa8.17□□□□□ -1.1
CCDC40-212ENST00000574799 PTGDSP41222 190 aa8.17□□□□□ -1.1
CCDC40-212ENST00000574799 TCL1AP56279 114 aa8.17□□□□□ -1.1
CCDC40-212ENST00000574799 SNAI3Q3KNW1 292 aa8.17□□□□□ -1.1
CCDC40-212ENST00000574799 STUMQ69YW2 141 aa8.17□□□□□ -1.1
CCDC40-212ENST00000574799 TMEM211Q6ICI0 200 aa8.17□□□□□ -1.1
CCDC40-212ENST00000574799 ZNF611Q8N823 705 aa8.17□□□□□ -1.1
CCDC40-212ENST00000574799 TMEM56Q96MV1 263 aa8.17□□□□□ -1.1
CCDC40-212ENST00000574799 SIT1Q9Y3P8 196 aa8.17□□□□□ -1.1
CCDC40-212ENST00000574799 TMEM56-RWDD3S4R434 201 aa8.17□□□□□ -1.1
CCDC40-212ENST00000574799 HSBP1O75506 76 aa8.16□□□□□ -1.1
CCDC40-212ENST00000574799 TOX4O94842 621 aa8.16□□□□□ -1.1
CCDC40-212ENST00000574799 TNFSF4P23510 183 aa8.16□□□□□ -1.1
CCDC40-212ENST00000574799 CXCL12P48061 93 aa8.16□□□□□ -1.1
CCDC40-212ENST00000574799 UBE2NP61088 152 aaKnown RBP8.16□□□□□ -1.1
CCDC40-212ENST00000574799 ZXDAP98168 799 aa8.16□□□□□ -1.1
CCDC40-212ENST00000574799 LRRC75BQ2VPJ9 315 aa8.16□□□□□ -1.1
CCDC40-212ENST00000574799 Q56UQ5 140 aa8.16□□□□□ -1.1
CCDC40-212ENST00000574799 SPINK9Q5DT21 86 aa8.16□□□□□ -1.1
CCDC40-212ENST00000574799 MKXQ8IYA7 352 aa8.16□□□□□ -1.1
CCDC40-212ENST00000574799 ZDHHC23Q8IYP9 409 aa8.16□□□□□ -1.1
CCDC40-212ENST00000574799 UHRF2Q96PU4 802 aa8.16□□□□□ -1.1
CCDC40-212ENST00000574799 PXMP4Q9Y6I8 212 aa8.16□□□□□ -1.1
CCDC40-212ENST00000574799 KMT2EQ8IZD2 1858 aa8.16□□□□□ -1.1
CCDC40-212ENST00000574799 IGKV1D-13A0A0B4J2D9 117 aa8.16□□□□□ -1.1
CCDC40-212ENST00000574799 A0A1B0GX78 115 aa8.16□□□□□ -1.1
CCDC40-212ENST00000574799 PATE3B3GLJ2 98 aa8.16□□□□□ -1.1
CCDC40-212ENST00000574799 EFNA2O43921 213 aa8.16□□□□□ -1.1
CCDC40-212ENST00000574799 IGKV1-13P0DP09 117 aa8.16□□□□□ -1.1
CCDC40-212ENST00000574799 RBX1P62877 108 aa8.16□□□□□ -1.1
CCDC40-212ENST00000574799 SFRP2Q96HF1 295 aa8.16□□□□□ -1.1
CCDC40-212ENST00000574799 FGF21Q9NSA1 209 aa8.16□□□□□ -1.1
CCDC40-212ENST00000574799 LRP5LA4QPB2 252 aa8.16□□□□□ -1.1
CCDC40-212ENST00000574799 SLC22A20A6NK97 555 aa8.16□□□□□ -1.1
CCDC40-212ENST00000574799 TRAPPC2LH3BP13 241 aa8.16□□□□□ -1.1
CCDC40-212ENST00000574799 K7ERU9 68 aa8.16□□□□□ -1.1
CCDC40-212ENST00000574799 SLC17A3O00476 420 aa8.16□□□□□ -1.1
CCDC40-212ENST00000574799 PGLYRP1O75594 196 aaPredicted RBP8.16□□□□□ -1.1
CCDC40-212ENST00000574799 NAPSAO96009 420 aa8.16□□□□□ -1.1
CCDC40-212ENST00000574799 CTXN2P0C2S0 81 aa8.16□□□□□ -1.1
CCDC40-212ENST00000574799 UCP1P25874 307 aa8.16□□□□□ -1.1
CCDC40-212ENST00000574799 CCL7P80098 99 aa8.16□□□□□ -1.1
CCDC40-212ENST00000574799 PLPPR5Q32ZL2 321 aa8.16□□□□□ -1.1
CCDC40-212ENST00000574799 RHBDD2Q6NTF9 364 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms