RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 ZBTB8BQ8NAP8 495 aaPredicted RBP19.59■□□□□ 0.73
ATPAF1-213ENST00000574428 OR13D1Q8NGV5 346 aa19.59■□□□□ 0.73
ATPAF1-213ENST00000574428 OR10X1Q8NGY0 326 aa19.59■□□□□ 0.73
ATPAF1-213ENST00000574428 RTN4IP1Q8WWV3 396 aaPredicted RBP19.59■□□□□ 0.73
ATPAF1-213ENST00000574428 TMEM186Q96B77 213 aa19.59■□□□□ 0.73
ATPAF1-213ENST00000574428 HOXB4P17483 251 aaPredicted RBP19.58■□□□□ 0.73
ATPAF1-213ENST00000574428 VAMP1P23763 118 aa19.58■□□□□ 0.73
ATPAF1-213ENST00000574428 TMEM128Q5BJH2 165 aa19.58■□□□□ 0.73
ATPAF1-213ENST00000574428 LINC00311Q8N616 119 aa19.58■□□□□ 0.73
ATPAF1-213ENST00000574428 ZNF596Q8TC21 504 aa19.58■□□□□ 0.73
ATPAF1-213ENST00000574428 AKR1E2Q96JD6 320 aa19.58■□□□□ 0.73
ATPAF1-213ENST00000574428 HEXA-AS1Q9H8Q6 139 aa19.58■□□□□ 0.73
ATPAF1-213ENST00000574428 MGAT4CQ9UBM8 478 aa19.58■□□□□ 0.73
ATPAF1-213ENST00000574428 GZMKP49863 264 aa19.57■□□□□ 0.72
ATPAF1-213ENST00000574428 SUPT4H1P63272 117 aaKnown RBP19.57■□□□□ 0.72
ATPAF1-213ENST00000574428 C1orf229Q6ZS94 237 aaPredicted RBP19.57■□□□□ 0.72
ATPAF1-213ENST00000574428 TBC1D26Q86UD7 250 aa19.57■□□□□ 0.72
ATPAF1-213ENST00000574428 CCDC71LQ8N9Z2 235 aa19.57■□□□□ 0.72
ATPAF1-213ENST00000574428 ZNF436Q9C0F3 470 aaPredicted RBP19.57■□□□□ 0.72
ATPAF1-213ENST00000574428 WNK2Q9Y3S1 2297 aa19.57■□□□□ 0.72
ATPAF1-213ENST00000574428 AKAP9Q99996 3911 aa19.57■□□□□ 0.72
ATPAF1-213ENST00000574428 TEX13DA0A0J9YY54 714 aaPredicted RBP19.57■□□□□ 0.72
ATPAF1-213ENST00000574428 CRYM-AS1A6NIL9 109 aa19.57■□□□□ 0.72
ATPAF1-213ENST00000574428 RNASEK-C17orf49H0YIS7 233 aa19.57■□□□□ 0.72
ATPAF1-213ENST00000574428 RAB29O14966 203 aa19.57■□□□□ 0.72
ATPAF1-213ENST00000574428 SMAD7O15105 426 aaKnown RBP19.57■□□□□ 0.72
ATPAF1-213ENST00000574428 PGLYRP1O75594 196 aaPredicted RBP19.57■□□□□ 0.72
ATPAF1-213ENST00000574428 SLC22A5O76082 557 aa19.57■□□□□ 0.72
ATPAF1-213ENST00000574428 TGFAP01135 160 aa19.57■□□□□ 0.72
ATPAF1-213ENST00000574428 IGLV1-47P01700 117 aa19.57■□□□□ 0.72
ATPAF1-213ENST00000574428 HLA-AP01891 365 aaKnown RBP19.57■□□□□ 0.72
ATPAF1-213ENST00000574428 RND3P61587 244 aa19.57■□□□□ 0.72
ATPAF1-213ENST00000574428 DHRS2Q13268 280 aa19.57■□□□□ 0.72
ATPAF1-213ENST00000574428 ZNF431Q8TF32 576 aaPredicted RBP19.57■□□□□ 0.72
ATPAF1-213ENST00000574428 MPPED1O15442 326 aa19.56■□□□□ 0.72
ATPAF1-213ENST00000574428 PROP1O75360 226 aa19.56■□□□□ 0.72
ATPAF1-213ENST00000574428 PRRX1P54821 245 aa19.56■□□□□ 0.72
ATPAF1-213ENST00000574428 UBE2MP61081 183 aaKnown RBP19.56■□□□□ 0.72
ATPAF1-213ENST00000574428 DHODHQ02127 395 aa19.56■□□□□ 0.72
ATPAF1-213ENST00000574428 FAHD2BQ6P2I3 314 aaPredicted RBP19.56■□□□□ 0.72
ATPAF1-213ENST00000574428 OR11H6Q8NGC7 330 aa19.56■□□□□ 0.72
ATPAF1-213ENST00000574428 LHX4Q969G2 390 aa19.56■□□□□ 0.72
ATPAF1-213ENST00000574428 FAHD2AQ96GK7 314 aa19.56■□□□□ 0.72
ATPAF1-213ENST00000574428 NAA60Q9H7X0 242 aa19.56■□□□□ 0.72
ATPAF1-213ENST00000574428 PIPOXQ9P0Z9 390 aa19.56■□□□□ 0.72
ATPAF1-213ENST00000574428 A0A1W2PRD5 423 aa19.55■□□□□ 0.72
ATPAF1-213ENST00000574428 A0A1W2PRF3 423 aa19.55■□□□□ 0.72
ATPAF1-213ENST00000574428 A0A1W2PRM7 423 aa19.55■□□□□ 0.72
ATPAF1-213ENST00000574428 ARG1P05089 322 aa19.55■□□□□ 0.72
ATPAF1-213ENST00000574428 S100GP29377 79 aa19.55■□□□□ 0.72
ATPAF1-213ENST00000574428 SLC9A3R2Q15599 337 aa19.55■□□□□ 0.72
ATPAF1-213ENST00000574428 MSMO1Q15800 293 aa19.55■□□□□ 0.72
ATPAF1-213ENST00000574428 HLA-DRB5Q30154 266 aa19.55■□□□□ 0.72
ATPAF1-213ENST00000574428 NCR3LG1Q68D85 454 aa19.55■□□□□ 0.72
ATPAF1-213ENST00000574428 SGPP2Q8IWX5 399 aa19.55■□□□□ 0.72
ATPAF1-213ENST00000574428 BEND2Q8NDZ0 799 aa19.55■□□□□ 0.72
ATPAF1-213ENST00000574428 OR51H1Q8NH63 302 aa19.55■□□□□ 0.72
ATPAF1-213ENST00000574428 ZNF251Q9BRH9 671 aa19.55■□□□□ 0.72
ATPAF1-213ENST00000574428 NOTCH2Q04721 2471 aa19.55■□□□□ 0.72
ATPAF1-213ENST00000574428 FLNBO75369 2602 aaKnown RBP19.55■□□□□ 0.72
ATPAF1-213ENST00000574428 CREBBPQ92793 2442 aa19.55■□□□□ 0.72
ATPAF1-213ENST00000574428 C9orf170A2RU37 121 aa19.55■□□□□ 0.72
ATPAF1-213ENST00000574428 M0R1X1 148 aa19.55■□□□□ 0.72
ATPAF1-213ENST00000574428 LINC00205P59089 165 aa19.55■□□□□ 0.72
ATPAF1-213ENST00000574428 EIF4EBP1Q13541 118 aaPredicted RBP19.55■□□□□ 0.72
ATPAF1-213ENST00000574428 LYG2Q86SG7 212 aa19.55■□□□□ 0.72
ATPAF1-213ENST00000574428 ZBTB34Q8NCN2 500 aa19.55■□□□□ 0.72
ATPAF1-213ENST00000574428 OR4P4Q8NGL7 312 aa19.55■□□□□ 0.72
ATPAF1-213ENST00000574428 CASTOR1Q8WTX7 329 aa19.55■□□□□ 0.72
ATPAF1-213ENST00000574428 C7orf69Q9H7B7 122 aa19.55■□□□□ 0.72
ATPAF1-213ENST00000574428 PRR13Q9NZ81 148 aa19.55■□□□□ 0.72
ATPAF1-213ENST00000574428 AUP1Q9Y679 476 aa19.55■□□□□ 0.72
ATPAF1-213ENST00000574428 ZANQ9Y493 2812 aa19.54■□□□□ 0.72
ATPAF1-213ENST00000574428 ZNF16P17020 682 aaPredicted RBP19.54■□□□□ 0.72
ATPAF1-213ENST00000574428 SP6Q3SY56 376 aa19.54■□□□□ 0.72
ATPAF1-213ENST00000574428 ZNF436-AS1Q8NC38 126 aaPredicted RBP19.54■□□□□ 0.72
ATPAF1-213ENST00000574428 ODF3BA8MYP8 253 aa19.53■□□□□ 0.72
ATPAF1-213ENST00000574428 GATA3P23771 443 aa19.53■□□□□ 0.72
ATPAF1-213ENST00000574428 RPL30P62888 115 aaKnown RBP19.53■□□□□ 0.72
ATPAF1-213ENST00000574428 DIAPH2-AS1Q14236 149 aa19.53■□□□□ 0.72
ATPAF1-213ENST00000574428 C2orf68Q2NKX9 166 aa19.53■□□□□ 0.72
ATPAF1-213ENST00000574428 GAB2Q9UQC2 676 aa19.53■□□□□ 0.72
ATPAF1-213ENST00000574428 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.53■□□□□ 0.725e-6■■■■□ 22.8
ATPAF1-213ENST00000574428 C3orf85A0A1B0GTC6 90 aa19.52■□□□□ 0.72
ATPAF1-213ENST00000574428 BUB1B-PAK6H3BSN5 160 aa19.52■□□□□ 0.72
ATPAF1-213ENST00000574428 SFT2D2O95562 160 aa19.52■□□□□ 0.72
ATPAF1-213ENST00000574428 OR5AC1P0C628 307 aa19.52■□□□□ 0.72
ATPAF1-213ENST00000574428 REG1BP48304 166 aa19.52■□□□□ 0.72
ATPAF1-213ENST00000574428 ZNF833PQ6ZTB9 187 aa19.52■□□□□ 0.72
ATPAF1-213ENST00000574428 TP53RKQ96S44 253 aa19.52■□□□□ 0.72
ATPAF1-213ENST00000574428 S1PR3Q99500 378 aa19.52■□□□□ 0.72
ATPAF1-213ENST00000574428 PLSCR3Q9NRY6 295 aa19.52■□□□□ 0.72
ATPAF1-213ENST00000574428 BOLA1Q9Y3E2 137 aa19.52■□□□□ 0.72
ATPAF1-213ENST00000574428 IFNA2P01563 188 aa19.52■□□□□ 0.71
ATPAF1-213ENST00000574428 F2RP25116 425 aa19.52■□□□□ 0.71
ATPAF1-213ENST00000574428 CYB5R2Q6BCY4 276 aa19.52■□□□□ 0.71
ATPAF1-213ENST00000574428 UXS1Q8NBZ7 420 aa19.52■□□□□ 0.71
ATPAF1-213ENST00000574428 ST6GALNAC6Q969X2 333 aa19.52■□□□□ 0.71
ATPAF1-213ENST00000574428 HYLS1Q96M11 299 aa19.52■□□□□ 0.71
ATPAF1-213ENST00000574428 CHIAQ9BZP6 476 aa19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms