RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 BRWD1-AS2P59051 145 aa9.41□□□□□ -0.9
RPAIN-212ENST00000573126 INO80CQ6PI98 192 aaPredicted RBP9.41□□□□□ -0.9
RPAIN-212ENST00000573126 TAF15Q92804 592 aaKnown RBP eCLIP9.41□□□□□ -0.9
RPAIN-212ENST00000573126 ZDHHC16Q969W1 377 aa9.41□□□□□ -0.9
RPAIN-212ENST00000573126 PLPPR2Q96GM1 343 aa9.41□□□□□ -0.9
RPAIN-212ENST00000573126 SEBOXQ9HB31 216 aaPredicted RBP9.41□□□□□ -0.9
RPAIN-212ENST00000573126 CADP27708 2225 aa9.41□□□□□ -0.9
RPAIN-212ENST00000573126 ODAMA1E959 279 aa9.4□□□□□ -0.9
RPAIN-212ENST00000573126 MAP1LC3B2A6NCE7 125 aa9.4□□□□□ -0.9
RPAIN-212ENST00000573126 OR5H1A6NKK0 313 aa9.4□□□□□ -0.9
RPAIN-212ENST00000573126 CEBPZOSA8MTT3 80 aa9.4□□□□□ -0.9
RPAIN-212ENST00000573126 CYB5BO43169 146 aa9.4□□□□□ -0.9
RPAIN-212ENST00000573126 PPIHO43447 177 aaKnown RBP9.4□□□□□ -0.9
RPAIN-212ENST00000573126 RBMXL2O75526 392 aaKnown RBP9.4□□□□□ -0.9
RPAIN-212ENST00000573126 IGKV3-15P01624 115 aa9.4□□□□□ -0.9
RPAIN-212ENST00000573126 KIR2DL2P43627 348 aaPredicted RBP9.4□□□□□ -0.9
RPAIN-212ENST00000573126 SERF2P84101 59 aa9.4□□□□□ -0.9
RPAIN-212ENST00000573126 FOXF2Q12947 444 aa9.4□□□□□ -0.9
RPAIN-212ENST00000573126 TRIP6Q15654 476 aaKnown RBP9.4□□□□□ -0.9
RPAIN-212ENST00000573126 LTC4SQ16873 150 aa9.4□□□□□ -0.9
RPAIN-212ENST00000573126 ALKBH2Q6NS38 261 aa9.4□□□□□ -0.9
RPAIN-212ENST00000573126 WDR82Q6UXN9 313 aa9.4□□□□□ -0.9
RPAIN-212ENST00000573126 RPP25LQ8N5L8 163 aaKnown RBP9.4□□□□□ -0.9
RPAIN-212ENST00000573126 C9orf106Q8NAJ2 232 aa9.4□□□□□ -0.9
RPAIN-212ENST00000573126 MAP1LC3BQ9GZQ8 125 aa9.4□□□□□ -0.9
RPAIN-212ENST00000573126 OOEPA6NGQ2 149 aa9.4□□□□□ -0.9
RPAIN-212ENST00000573126 CECR9P0C854 216 aa9.4□□□□□ -0.9
RPAIN-212ENST00000573126 TMEM41BQ5BJD5 291 aa9.4□□□□□ -0.9
RPAIN-212ENST00000573126 TMEM14EPQ6UXP3 125 aa9.4□□□□□ -0.9
RPAIN-212ENST00000573126 ACP7Q6ZNF0 438 aa9.4□□□□□ -0.9
RPAIN-212ENST00000573126 C1QL4Q86Z23 238 aa9.4□□□□□ -0.9
RPAIN-212ENST00000573126 WDR31Q8NA23 367 aa9.4□□□□□ -0.9
RPAIN-212ENST00000573126 CA5BP1Q8WTZ4 195 aa9.4□□□□□ -0.9
RPAIN-212ENST00000573126 MBD3L1Q8WWY6 194 aa9.4□□□□□ -0.9
RPAIN-212ENST00000573126 DCTN5Q9BTE1 182 aa9.4□□□□□ -0.9
RPAIN-212ENST00000573126 CISD1Q9NZ45 108 aaKnown RBP9.4□□□□□ -0.9
RPAIN-212ENST00000573126 HSPB7Q9UBY9 170 aa9.4□□□□□ -0.9
RPAIN-212ENST00000573126 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.4□□□□□ -0.91
RPAIN-212ENST00000573126 ZG16O60844 167 aa9.4□□□□□ -0.91
RPAIN-212ENST00000573126 COL10A1Q03692 680 aa9.4□□□□□ -0.91
RPAIN-212ENST00000573126 EDDM3AQ14507 147 aa9.4□□□□□ -0.91
RPAIN-212ENST00000573126 OR13A1Q8NGR1 328 aa9.4□□□□□ -0.91
RPAIN-212ENST00000573126 SLC25A22Q9H936 323 aa9.4□□□□□ -0.91
RPAIN-212ENST00000573126 LRRC30A6NM36 301 aa9.39□□□□□ -0.91
RPAIN-212ENST00000573126 C1QTNF9BB2RNN3 333 aa9.39□□□□□ -0.91
RPAIN-212ENST00000573126 ST8SIA5O15466 376 aa9.39□□□□□ -0.91
RPAIN-212ENST00000573126 DEFA4P12838 97 aa9.39□□□□□ -0.91
RPAIN-212ENST00000573126 CTAG1AP78358 180 aa9.39□□□□□ -0.91
RPAIN-212ENST00000573126 LHX4Q969G2 390 aa9.39□□□□□ -0.91
RPAIN-212ENST00000573126 ZNF251Q9BRH9 671 aa9.39□□□□□ -0.91
RPAIN-212ENST00000573126 TMPRSS5Q9H3S3 457 aa9.39□□□□□ -0.91
RPAIN-212ENST00000573126 INTS1Q8N201 2190 aaKnown RBP9.39□□□□□ -0.91
RPAIN-212ENST00000573126 SMG1Q96Q15 3661 aaKnown RBP9.39□□□□□ -0.91
RPAIN-212ENST00000573126 MGAQ8IWI9 3026 aa9.39□□□□□ -0.91
RPAIN-212ENST00000573126 LINC00473A8K010 186 aa9.39□□□□□ -0.91
RPAIN-212ENST00000573126 FAM90A26D6RGX4 464 aa9.39□□□□□ -0.91
RPAIN-212ENST00000573126 IGHG3P01860 377 aa9.39□□□□□ -0.91
RPAIN-212ENST00000573126 EIF2S3P41091 472 aaKnown RBP9.39□□□□□ -0.91
RPAIN-212ENST00000573126 NDUFA6P56556 154 aa9.39□□□□□ -0.91
RPAIN-212ENST00000573126 B2MP61769 119 aa9.39□□□□□ -0.91
RPAIN-212ENST00000573126 S100A12P80511 92 aa9.39□□□□□ -0.91
RPAIN-212ENST00000573126 CATR1Q13166 79 aa9.39□□□□□ -0.91
RPAIN-212ENST00000573126 MSMO1Q15800 293 aa9.39□□□□□ -0.91
RPAIN-212ENST00000573126 Q3ZCU0 254 aa9.39□□□□□ -0.91
RPAIN-212ENST00000573126 SLC35E4Q6ICL7 350 aa9.39□□□□□ -0.91
RPAIN-212ENST00000573126 ACSM6Q6P461 480 aa9.39□□□□□ -0.91
RPAIN-212ENST00000573126 OR10G4Q8NGN3 311 aa9.39□□□□□ -0.91
RPAIN-212ENST00000573126 SSX3Q99909 188 aa9.39□□□□□ -0.91
RPAIN-212ENST00000573126 CXXC4Q9H2H0 198 aa9.39□□□□□ -0.91
RPAIN-212ENST00000573126 SLC39A9Q9NUM3 307 aa9.39□□□□□ -0.91
RPAIN-212ENST00000573126 DOK5Q9P104 306 aa9.39□□□□□ -0.91
RPAIN-212ENST00000573126 PSG11Q9UQ72 335 aa9.39□□□□□ -0.91
RPAIN-212ENST00000573126 LINC00587B1AMM8 73 aa9.38□□□□□ -0.91
RPAIN-212ENST00000573126 ZNF737O75373 536 aa9.38□□□□□ -0.91
RPAIN-212ENST00000573126 TRGC2P03986 189 aa9.38□□□□□ -0.91
RPAIN-212ENST00000573126 FABP1P07148 127 aa9.38□□□□□ -0.91
RPAIN-212ENST00000573126 WT1P19544 449 aaPredicted RBP9.38□□□□□ -0.91
RPAIN-212ENST00000573126 EIF4EBP1Q13541 118 aaPredicted RBP9.38□□□□□ -0.91
RPAIN-212ENST00000573126 GUSBP1Q15486 140 aa9.38□□□□□ -0.91
RPAIN-212ENST00000573126 DTD1Q8TEA8 209 aa9.38□□□□□ -0.91
RPAIN-212ENST00000573126 PINX1Q96BK5 328 aaKnown RBP9.38□□□□□ -0.91
RPAIN-212ENST00000573126 TCEAL7Q9BRU2 100 aa9.38□□□□□ -0.91
RPAIN-212ENST00000573126 SIRT7Q9NRC8 400 aa9.38□□□□□ -0.91
RPAIN-212ENST00000573126 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.38□□□□□ -0.91
RPAIN-212ENST00000573126 VAX2Q9UIW0 290 aa9.38□□□□□ -0.91
RPAIN-212ENST00000573126 CACNA1GO43497 2377 aa9.38□□□□□ -0.91
RPAIN-212ENST00000573126 CXorf65A6NEN9 183 aa9.38□□□□□ -0.91
RPAIN-212ENST00000573126 IGHV3-13P01766 116 aa9.38□□□□□ -0.91
RPAIN-212ENST00000573126 IGHV3-7P01780 117 aa9.38□□□□□ -0.91
RPAIN-212ENST00000573126 P0C879 139 aa9.38□□□□□ -0.91
RPAIN-212ENST00000573126 COX5AP20674 150 aa9.38□□□□□ -0.91
RPAIN-212ENST00000573126 H2BFWTQ7Z2G1 175 aa9.38□□□□□ -0.91
RPAIN-212ENST00000573126 MRGPRGQ86SM5 289 aa9.38□□□□□ -0.91
RPAIN-212ENST00000573126 ZBTB34Q8NCN2 500 aa9.38□□□□□ -0.91
RPAIN-212ENST00000573126 GSN-AS1Q9NRJ2 163 aa9.38□□□□□ -0.91
RPAIN-212ENST00000573126 ICE1Q9Y2F5 2266 aa9.37□□□□□ -0.91
RPAIN-212ENST00000573126 IFITM10A6NMD0 228 aa9.37□□□□□ -0.91
RPAIN-212ENST00000573126 HIST1H2BKO60814 126 aa9.37□□□□□ -0.91
RPAIN-212ENST00000573126 HIST1H2BJP06899 126 aa9.37□□□□□ -0.91
RPAIN-212ENST00000573126 HIST1H2BOP23527 126 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms