RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 ACP7Q6ZNF0 438 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 SLC25A26Q70HW3 274 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 AHSA2Q719I0 299 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 GDPD3Q7L5L3 318 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 WDR86Q86TI4 376 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 ANGPTL5Q86XS5 388 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 CROCCP3Q8IVE0 287 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 SAXO1Q8IYX7 474 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 FAM58AQ8N1B3 248 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 MS4A15Q8N5U1 240 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 KIR3DL3Q8N743 410 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 C19orf18Q8NEA5 215 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 TMEM185AQ8NFB2 350 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 BPIFB6Q8NFQ5 453 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 ANGPTL6Q8NI99 470 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 TYMSOSQ8TAI1 123 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 TRMT10AQ8TBZ6 339 aaKnown RBP3.02□□□□□ -1.93
NUP88-202ENST00000570937 APH1BQ8WW43 257 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 H1FXQ92522 213 aaKnown RBP3.02□□□□□ -1.93
NUP88-202ENST00000570937 GGHQ92820 318 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 GHSRQ92847 366 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 ST6GALNAC6Q969X2 333 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 UPRTQ96BW1 309 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 SMIM19Q96E16 107 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 ADAT3Q96EY9 351 aaPredicted RBP3.02□□□□□ -1.93
NUP88-202ENST00000570937 SDSLQ96GA7 329 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 GPER1Q99527 375 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 PDCD1LG2Q9BQ51 273 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 NRIP2Q9BQI9 281 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 METTL8Q9H825 291 aaKnown RBP3.02□□□□□ -1.93
NUP88-202ENST00000570937 ISG20L2Q9H9L3 353 aaKnown RBP3.02□□□□□ -1.93
NUP88-202ENST00000570937 TMEM138Q9NPI0 162 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 MMP26Q9NRE1 261 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 ONECUT1Q9UBC0 465 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 OPN4Q9UHM6 478 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 PSORS1C1Q9UIG5 152 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 RPUSD1Q9UJJ7 312 aaKnown RBP3.02□□□□□ -1.93
NUP88-202ENST00000570937 KPTNQ9Y664 436 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 MTORP42345 2549 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 CSPG4Q6UVK1 2322 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 CR1P17927 2039 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 IGKV1D-17A0A075B6S4 117 aa3.01□□□□□ -1.93
NUP88-202ENST00000570937 IGHV1-69DA0A0B4J2H0 117 aa3.01□□□□□ -1.93
NUP88-202ENST00000570937 hADV38S2A0JD32 116 aa3.01□□□□□ -1.93
NUP88-202ENST00000570937 BTBD17A6NE02 478 aa3.01□□□□□ -1.93
NUP88-202ENST00000570937 KLLNB2CW77 178 aa3.01□□□□□ -1.93
NUP88-202ENST00000570937 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.01□□□□□ -1.93
NUP88-202ENST00000570937 K7N7A8 449 aa3.01□□□□□ -1.93
NUP88-202ENST00000570937 M0R1W7 72 aa3.01□□□□□ -1.93
NUP88-202ENST00000570937 DEGS1O15121 323 aa3.01□□□□□ -1.93
NUP88-202ENST00000570937 SYNGR1O43759 233 aa3.01□□□□□ -1.93
NUP88-202ENST00000570937 ATP6V1G2O95670 118 aa3.01□□□□□ -1.93
NUP88-202ENST00000570937 PAHP00439 452 aa3.01□□□□□ -1.93
NUP88-202ENST00000570937 IGHV1-69P01742 117 aa3.01□□□□□ -1.93
NUP88-202ENST00000570937 ALDOBP05062 364 aa3.01□□□□□ -1.93
NUP88-202ENST00000570937 CDK1P06493 297 aa3.01□□□□□ -1.93
NUP88-202ENST00000570937 CELP19835 753 aa3.01□□□□□ -1.93
NUP88-202ENST00000570937 PSMA1P25786 263 aaKnown RBP3.01□□□□□ -1.93
NUP88-202ENST00000570937 ZNF93P35789 620 aaPredicted RBP3.01□□□□□ -1.93
NUP88-202ENST00000570937 VHLP40337 213 aa3.01□□□□□ -1.93
NUP88-202ENST00000570937 POU3F4P49335 361 aa3.01□□□□□ -1.93
NUP88-202ENST00000570937 AQP4P55087 323 aa3.01□□□□□ -1.93
NUP88-202ENST00000570937 WNT4P56705 351 aa3.01□□□□□ -1.93
NUP88-202ENST00000570937 FGF12P61328 243 aa3.01□□□□□ -1.93
NUP88-202ENST00000570937 ARF6P62330 175 aa3.01□□□□□ -1.93
NUP88-202ENST00000570937 RPL31P62899 125 aaKnown RBP3.01□□□□□ -1.93
NUP88-202ENST00000570937 BDH1Q02338 343 aa3.01□□□□□ -1.93
NUP88-202ENST00000570937 PAX2Q02962 417 aa3.01□□□□□ -1.93
NUP88-202ENST00000570937 MEF2CQ06413 473 aaPredicted RBP3.01□□□□□ -1.93
NUP88-202ENST00000570937 BAMBIQ13145 260 aa3.01□□□□□ -1.93
NUP88-202ENST00000570937 GPR50Q13585 617 aa3.01□□□□□ -1.93
NUP88-202ENST00000570937 GPR176Q14439 515 aa3.01□□□□□ -1.93
NUP88-202ENST00000570937 CDK5R1Q15078 307 aa3.01□□□□□ -1.93
NUP88-202ENST00000570937 RSU1Q15404 277 aa3.01□□□□□ -1.93
NUP88-202ENST00000570937 SPHARQ15513 63 aa3.01□□□□□ -1.93
NUP88-202ENST00000570937 TRAM1Q15629 374 aa3.01□□□□□ -1.93
NUP88-202ENST00000570937 Q499Y3 187 aa3.01□□□□□ -1.93
NUP88-202ENST00000570937 DMRTC1Q5HYR2 192 aa3.01□□□□□ -1.93
NUP88-202ENST00000570937 RBM48Q5RL73 367 aaKnown RBP3.01□□□□□ -1.93
NUP88-202ENST00000570937 OR2G6Q5TZ20 316 aa3.01□□□□□ -1.93
NUP88-202ENST00000570937 DMKNQ6E0U4 476 aaPredicted RBP3.01□□□□□ -1.93
NUP88-202ENST00000570937 METAP1DQ6UB28 335 aaPredicted RBP3.01□□□□□ -1.93
NUP88-202ENST00000570937 IZUMO2Q6UXV1 221 aa3.01□□□□□ -1.93
NUP88-202ENST00000570937 CALHM1Q8IU99 346 aa3.01□□□□□ -1.93
NUP88-202ENST00000570937 CDH26Q8IXH8 852 aa3.01□□□□□ -1.93
NUP88-202ENST00000570937 FAM216BQ8N7L0 139 aa3.01□□□□□ -1.93
NUP88-202ENST00000570937 NKAIN3Q8N8D7 197 aa3.01□□□□□ -1.93
NUP88-202ENST00000570937 ZNF565Q8N9K5 539 aa3.01□□□□□ -1.93
NUP88-202ENST00000570937 ASCC1Q8N9N2 400 aaKnown RBP3.01□□□□□ -1.93
NUP88-202ENST00000570937 CHST4Q8NCG5 386 aa3.01□□□□□ -1.93
NUP88-202ENST00000570937 ZNRF1Q8ND25 227 aa3.01□□□□□ -1.93
NUP88-202ENST00000570937 LY6G5BQ8NDX9 201 aa3.01□□□□□ -1.93
NUP88-202ENST00000570937 OR13C9Q8NGT0 318 aa3.01□□□□□ -1.93
NUP88-202ENST00000570937 C8orf46Q8TAG6 207 aa3.01□□□□□ -1.93
NUP88-202ENST00000570937 EMG1Q92979 244 aaKnown RBP3.01□□□□□ -1.93
NUP88-202ENST00000570937 TMEM106AQ96A25 262 aa3.01□□□□□ -1.93
NUP88-202ENST00000570937 GAFA1Q96PS6 74 aa3.01□□□□□ -1.93
NUP88-202ENST00000570937 CDCA4Q9BXL8 241 aa3.01□□□□□ -1.93
NUP88-202ENST00000570937 ANKRD60Q9BZ19 345 aa3.01□□□□□ -1.93
NUP88-202ENST00000570937 FAM192AQ9GZU8 254 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms