RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 PLEKHJ1Q9NW61 149 aa6.62□□□□□ -1.35
CTDNEP1-203ENST00000570385 GHRLQ9UBU3 117 aa6.62□□□□□ -1.35
CTDNEP1-203ENST00000570385 AK3Q9UIJ7 227 aa6.62□□□□□ -1.35
CTDNEP1-203ENST00000570385 LRRC42Q9Y546 428 aa6.62□□□□□ -1.35
CTDNEP1-203ENST00000570385 SACSQ9NZJ4 4579 aa6.61□□□□□ -1.35
CTDNEP1-203ENST00000570385 PTGES3LE9PB15 166 aa6.61□□□□□ -1.35
CTDNEP1-203ENST00000570385 HSPA12AO43301 675 aa6.61□□□□□ -1.35
CTDNEP1-203ENST00000570385 SLC25A17O43808 307 aa6.61□□□□□ -1.35
CTDNEP1-203ENST00000570385 PROP1O75360 226 aa6.61□□□□□ -1.35
CTDNEP1-203ENST00000570385 IGKV1-16P04430 117 aa6.61□□□□□ -1.35
CTDNEP1-203ENST00000570385 CD1AP06126 327 aa6.61□□□□□ -1.35
CTDNEP1-203ENST00000570385 OR8U9P0C7N5 309 aa6.61□□□□□ -1.35
CTDNEP1-203ENST00000570385 UBBP0CG47 229 aa6.61□□□□□ -1.35
CTDNEP1-203ENST00000570385 IGHV4-30-4P0DP06 118 aa6.61□□□□□ -1.35
CTDNEP1-203ENST00000570385 CPEP16870 476 aa6.61□□□□□ -1.35
CTDNEP1-203ENST00000570385 SRMP19623 302 aa6.61□□□□□ -1.35
CTDNEP1-203ENST00000570385 MC5RP33032 325 aa6.61□□□□□ -1.35
CTDNEP1-203ENST00000570385 CRIP2P52943 208 aaPredicted RBP6.61□□□□□ -1.35
CTDNEP1-203ENST00000570385 QRFPP83859 136 aa6.61□□□□□ -1.35
CTDNEP1-203ENST00000570385 FXYD3Q14802 87 aa6.61□□□□□ -1.35
CTDNEP1-203ENST00000570385 C1orf100Q5SVJ3 147 aa6.61□□□□□ -1.35
CTDNEP1-203ENST00000570385 ZNF880Q6PDB4 577 aa6.61□□□□□ -1.35
CTDNEP1-203ENST00000570385 CD200R1LQ6Q8B3 271 aa6.61□□□□□ -1.35
CTDNEP1-203ENST00000570385 ZNF383Q8NA42 475 aa6.61□□□□□ -1.35
CTDNEP1-203ENST00000570385 OR5AN1Q8NGI8 311 aa6.61□□□□□ -1.35
CTDNEP1-203ENST00000570385 KCNG3Q8TAE7 436 aa6.61□□□□□ -1.35
CTDNEP1-203ENST00000570385 TMEM203Q969S6 136 aa6.61□□□□□ -1.35
CTDNEP1-203ENST00000570385 FLYWCH2Q96CP2 140 aaKnown RBP6.61□□□□□ -1.35
CTDNEP1-203ENST00000570385 RHOVQ96L33 236 aa6.61□□□□□ -1.35
CTDNEP1-203ENST00000570385 AGMATQ9BSE5 352 aa6.61□□□□□ -1.35
CTDNEP1-203ENST00000570385 TM2D1Q9BX74 207 aa6.61□□□□□ -1.35
CTDNEP1-203ENST00000570385 ZMAT4Q9H898 229 aa6.61□□□□□ -1.35
CTDNEP1-203ENST00000570385 TMEM14DPA8MWL7 114 aa6.6□□□□□ -1.35
CTDNEP1-203ENST00000570385 M0R1X1 148 aa6.6□□□□□ -1.35
CTDNEP1-203ENST00000570385 EBAG9O00559 213 aa6.6□□□□□ -1.35
CTDNEP1-203ENST00000570385 ARPC1BO15143 372 aaKnown RBP6.6□□□□□ -1.35
CTDNEP1-203ENST00000570385 SLC22A1O15245 554 aa6.6□□□□□ -1.35
CTDNEP1-203ENST00000570385 CNIH1O95406 144 aa6.6□□□□□ -1.35
CTDNEP1-203ENST00000570385 CD3GP09693 182 aa6.6□□□□□ -1.35
CTDNEP1-203ENST00000570385 APELAP0DMC3 54 aa6.6□□□□□ -1.35
CTDNEP1-203ENST00000570385 ARSBP15848 533 aa6.6□□□□□ -1.35
CTDNEP1-203ENST00000570385 ZBTB25P24278 435 aa6.6□□□□□ -1.35
CTDNEP1-203ENST00000570385 CD40LGP29965 261 aa6.6□□□□□ -1.35
CTDNEP1-203ENST00000570385 CLDN12P56749 244 aa6.6□□□□□ -1.35
CTDNEP1-203ENST00000570385 HLA-DRB3P79483 266 aa6.6□□□□□ -1.35
CTDNEP1-203ENST00000570385 PJVKQ0ZLH3 352 aa6.6□□□□□ -1.35
CTDNEP1-203ENST00000570385 RCN1Q15293 331 aa6.6□□□□□ -1.35
CTDNEP1-203ENST00000570385 HSD17B12Q53GQ0 312 aa6.6□□□□□ -1.35
CTDNEP1-203ENST00000570385 AKIRIN2Q53H80 203 aa6.6□□□□□ -1.35
CTDNEP1-203ENST00000570385 FAM71F2Q6NXP2 309 aa6.6□□□□□ -1.35
CTDNEP1-203ENST00000570385 ZNF562Q6V9R5 426 aa6.6□□□□□ -1.35
CTDNEP1-203ENST00000570385 ANKRD13BQ86YJ7 626 aa6.6□□□□□ -1.35
CTDNEP1-203ENST00000570385 Q8N1Y9 231 aa6.6□□□□□ -1.35
CTDNEP1-203ENST00000570385 TCTEX1D1Q8N7M0 179 aa6.6□□□□□ -1.35
CTDNEP1-203ENST00000570385 LPAR5Q9H1C0 372 aa6.6□□□□□ -1.35
CTDNEP1-203ENST00000570385 ZNF221Q9UK13 617 aa6.6□□□□□ -1.35
CTDNEP1-203ENST00000570385 ADAM30Q9UKF2 790 aa6.6□□□□□ -1.35
CTDNEP1-203ENST00000570385 AK6Q9Y3D8 172 aaKnown RBP6.6□□□□□ -1.35
CTDNEP1-203ENST00000570385 IGKV1-6A0A0C4DH72 117 aa6.59□□□□□ -1.35
CTDNEP1-203ENST00000570385 C13orf42A0A1B0GVH6 325 aa6.59□□□□□ -1.35
CTDNEP1-203ENST00000570385 RBBP9O75884 186 aa6.59□□□□□ -1.35
CTDNEP1-203ENST00000570385 BPNT1O95861 308 aa6.59□□□□□ -1.35
CTDNEP1-203ENST00000570385 TRBV12-3P01733 135 aa6.59□□□□□ -1.35
CTDNEP1-203ENST00000570385 TFAP2AP05549 437 aa6.59□□□□□ -1.35
CTDNEP1-203ENST00000570385 CDK1P06493 297 aa6.59□□□□□ -1.35
CTDNEP1-203ENST00000570385 VEGFCP49767 419 aa6.59□□□□□ -1.35
CTDNEP1-203ENST00000570385 TMEM50BP56557 158 aa6.59□□□□□ -1.35
CTDNEP1-203ENST00000570385 SPHARQ15513 63 aa6.59□□□□□ -1.35
CTDNEP1-203ENST00000570385 MED22Q15528 200 aa6.59□□□□□ -1.35
CTDNEP1-203ENST00000570385 LIPKQ5VXJ0 399 aa6.59□□□□□ -1.35
CTDNEP1-203ENST00000570385 PYHIN1Q6K0P9 492 aa6.59□□□□□ -1.35
CTDNEP1-203ENST00000570385 ADAMTSL5Q6ZMM2 481 aa6.59□□□□□ -1.35
CTDNEP1-203ENST00000570385 MOB1BQ7L9L4 216 aa6.59□□□□□ -1.35
CTDNEP1-203ENST00000570385 MS4A15Q8N5U1 240 aa6.59□□□□□ -1.35
CTDNEP1-203ENST00000570385 PACRGLQ8N7B6 248 aa6.59□□□□□ -1.35
CTDNEP1-203ENST00000570385 POC5Q8NA72 575 aa6.59□□□□□ -1.35
CTDNEP1-203ENST00000570385 FBLIM1Q8WUP2 373 aa6.59□□□□□ -1.35
CTDNEP1-203ENST00000570385 EDARADDQ8WWZ3 215 aa6.59□□□□□ -1.35
CTDNEP1-203ENST00000570385 PHYHIPQ92561 330 aa6.59□□□□□ -1.35
CTDNEP1-203ENST00000570385 THRSPQ92748 146 aa6.59□□□□□ -1.35
CTDNEP1-203ENST00000570385 ARHGAP5-AS1Q96IT6 56 aa6.59□□□□□ -1.35
CTDNEP1-203ENST00000570385 CITED4Q96RK1 184 aa6.59□□□□□ -1.35
CTDNEP1-203ENST00000570385 TSNAXQ99598 290 aaKnown RBP6.59□□□□□ -1.35
CTDNEP1-203ENST00000570385 GFI1Q99684 422 aa6.59□□□□□ -1.35
CTDNEP1-203ENST00000570385 CMSS1Q9BQ75 279 aaKnown RBP6.59□□□□□ -1.35
CTDNEP1-203ENST00000570385 ELOVL1Q9BW60 279 aa6.59□□□□□ -1.35
CTDNEP1-203ENST00000570385 MND1Q9BWT6 205 aa6.59□□□□□ -1.35
CTDNEP1-203ENST00000570385 SLA2Q9H6Q3 261 aa6.59□□□□□ -1.35
CTDNEP1-203ENST00000570385 PLGRKTQ9HBL7 147 aa6.59□□□□□ -1.35
CTDNEP1-203ENST00000570385 RANGRFQ9HD47 186 aaPredicted RBP6.59□□□□□ -1.35
CTDNEP1-203ENST00000570385 Q9N2K0 584 aa6.59□□□□□ -1.35
CTDNEP1-203ENST00000570385 PLCXD1Q9NUJ7 323 aa6.59□□□□□ -1.35
CTDNEP1-203ENST00000570385 FKBP14Q9NWM8 211 aa6.59□□□□□ -1.35
CTDNEP1-203ENST00000570385 RDH8Q9NYR8 311 aa6.59□□□□□ -1.35
CTDNEP1-203ENST00000570385 STUB1Q9UNE7 303 aa6.59□□□□□ -1.35
CTDNEP1-203ENST00000570385 LCE6AA0A183 80 aa6.58□□□□□ -1.36
CTDNEP1-203ENST00000570385 LDLRAD4O15165 306 aa6.58□□□□□ -1.36
CTDNEP1-203ENST00000570385 IGLV1-51P01701 117 aa6.58□□□□□ -1.36
CTDNEP1-203ENST00000570385 IGLV2-23P01705 113 aa6.58□□□□□ -1.36
CTDNEP1-203ENST00000570385 APOA2P02652 100 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms