RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 ZNF2Q9BSG1 426 aaPredicted RBP13.47□□□□□ -0.25
COMMD4-224ENST00000568877 TINAGL1Q9GZM7 467 aaPredicted RBP13.47□□□□□ -0.25
COMMD4-224ENST00000568877 AKIP1Q9NQ31 210 aa13.47□□□□□ -0.25
COMMD4-224ENST00000568877 ANKRD20A5PA0PJZ0 165 aa13.46□□□□□ -0.25
COMMD4-224ENST00000568877 PROP1O75360 226 aa13.46□□□□□ -0.25
COMMD4-224ENST00000568877 RAB3DO95716 219 aa13.46□□□□□ -0.25
COMMD4-224ENST00000568877 IFNA6P05013 189 aa13.46□□□□□ -0.25
COMMD4-224ENST00000568877 HERV-K104P61576 105 aa13.46□□□□□ -0.25
COMMD4-224ENST00000568877 UBA52P62987 128 aaKnown RBP13.46□□□□□ -0.25
COMMD4-224ENST00000568877 HABP2Q14520 560 aaPredicted RBP13.46□□□□□ -0.25
COMMD4-224ENST00000568877 OR56B4Q8NH76 319 aa13.46□□□□□ -0.25
COMMD4-224ENST00000568877 TRIM63Q969Q1 353 aa13.46□□□□□ -0.25
COMMD4-224ENST00000568877 NABP2Q9BQ15 211 aa13.46□□□□□ -0.25
COMMD4-224ENST00000568877 MRPL20Q9BYC9 149 aaKnown RBP13.46□□□□□ -0.25
COMMD4-224ENST00000568877 SDHAF2Q9NX18 166 aa13.46□□□□□ -0.25
COMMD4-224ENST00000568877 FAM90A9PA6NNJ1 464 aa13.45□□□□□ -0.26
COMMD4-224ENST00000568877 SLC22A5O76082 557 aa13.45□□□□□ -0.26
COMMD4-224ENST00000568877 CD24P25063 80 aa13.45□□□□□ -0.26
COMMD4-224ENST00000568877 FXYD4P59646 89 aa13.45□□□□□ -0.26
COMMD4-224ENST00000568877 MEF2DQ14814 521 aa13.45□□□□□ -0.26
COMMD4-224ENST00000568877 LY6EQ16553 131 aa13.45□□□□□ -0.26
COMMD4-224ENST00000568877 THNSL2Q86YJ6 484 aa13.45□□□□□ -0.26
COMMD4-224ENST00000568877 ZNF645Q8N7E2 425 aa13.45□□□□□ -0.26
COMMD4-224ENST00000568877 OR4D10Q8NGI6 311 aa13.45□□□□□ -0.26
COMMD4-224ENST00000568877 SECTM1Q8WVN6 248 aa13.45□□□□□ -0.26
COMMD4-224ENST00000568877 CAPSLQ8WWF8 208 aa13.45□□□□□ -0.26
COMMD4-224ENST00000568877 S100ZQ8WXG8 99 aa13.45□□□□□ -0.26
COMMD4-224ENST00000568877 MOB3AQ96BX8 217 aa13.45□□□□□ -0.26
COMMD4-224ENST00000568877 SDHCQ99643 169 aaPredicted RBP13.45□□□□□ -0.26
COMMD4-224ENST00000568877 CHIAQ9BZP6 476 aa13.45□□□□□ -0.26
COMMD4-224ENST00000568877 VPREB3Q9UKI3 123 aa13.45□□□□□ -0.26
COMMD4-224ENST00000568877 TCF19Q9Y242 345 aa13.45□□□□□ -0.26
COMMD4-224ENST00000568877 IGHV3-72A0A0B4J1Y9 119 aa13.44□□□□□ -0.26
COMMD4-224ENST00000568877 TRIM77I1YAP6 450 aa13.44□□□□□ -0.26
COMMD4-224ENST00000568877 M0R1X1 148 aa13.44□□□□□ -0.26
COMMD4-224ENST00000568877 RNASE1P07998 156 aaKnown RBP13.44□□□□□ -0.26
COMMD4-224ENST00000568877 FAM106CPP0CH98 169 aa13.44□□□□□ -0.26
COMMD4-224ENST00000568877 AKAIN1P0CW23 69 aa13.44□□□□□ -0.26
COMMD4-224ENST00000568877 CT45A6P0DMU7 189 aa13.44□□□□□ -0.26
COMMD4-224ENST00000568877 CT45A5P0DMU8 189 aa13.44□□□□□ -0.26
COMMD4-224ENST00000568877 CT45A7P0DMV0 189 aa13.44□□□□□ -0.26
COMMD4-224ENST00000568877 CD1BP29016 333 aa13.44□□□□□ -0.26
COMMD4-224ENST00000568877 SRSF2Q01130 221 aaKnown RBP13.44□□□□□ -0.26
COMMD4-224ENST00000568877 LSAMPQ13449 338 aa13.44□□□□□ -0.26
COMMD4-224ENST00000568877 BAK1Q16611 211 aa13.44□□□□□ -0.26
COMMD4-224ENST00000568877 TMEM17Q86X19 198 aa13.44□□□□□ -0.26
COMMD4-224ENST00000568877 TOMM5Q8N4H5 51 aa13.44□□□□□ -0.26
COMMD4-224ENST00000568877 ARRDC1Q8N5I2 433 aa13.44□□□□□ -0.26
COMMD4-224ENST00000568877 C5orf30Q96GV9 206 aa13.44□□□□□ -0.26
COMMD4-224ENST00000568877 SLC5A7Q9GZV3 580 aa13.44□□□□□ -0.26
COMMD4-224ENST00000568877 PITPNC1Q9UKF7 332 aa13.44□□□□□ -0.26
COMMD4-224ENST00000568877 A6NDX4 124 aa13.43□□□□□ -0.26
COMMD4-224ENST00000568877 IGLV2-14P01704 120 aa13.43□□□□□ -0.26
COMMD4-224ENST00000568877 AMY2AP04746 511 aa13.43□□□□□ -0.26
COMMD4-224ENST00000568877 SNRNP70P08621 437 aaKnown RBP13.43□□□□□ -0.26
COMMD4-224ENST00000568877 RIPPLY3P57055 190 aa13.43□□□□□ -0.26
COMMD4-224ENST00000568877 AP3S2P59780 193 aa13.43□□□□□ -0.26
COMMD4-224ENST00000568877 KLF9Q13886 244 aaPredicted RBP13.43□□□□□ -0.26
COMMD4-224ENST00000568877 MSMO1Q15800 293 aa13.43□□□□□ -0.26
COMMD4-224ENST00000568877 C16orf87Q6PH81 154 aa13.43□□□□□ -0.26
COMMD4-224ENST00000568877 CCBE1Q6UXH8 406 aaPredicted RBP13.43□□□□□ -0.26
COMMD4-224ENST00000568877 DRAXINQ8NBI3 349 aaPredicted RBP13.43□□□□□ -0.26
COMMD4-224ENST00000568877 OR4C16Q8NGL9 310 aa13.43□□□□□ -0.26
COMMD4-224ENST00000568877 CCL28Q9NRJ3 127 aa13.43□□□□□ -0.26
COMMD4-224ENST00000568877 OR5H14A6NHG9 310 aa13.42□□□□□ -0.26
COMMD4-224ENST00000568877 DISC1C4P0D8 188 aa13.42□□□□□ -0.26
COMMD4-224ENST00000568877 IGKV1D-33P01593 117 aa13.42□□□□□ -0.26
COMMD4-224ENST00000568877 IGKV1-33P01594 117 aa13.42□□□□□ -0.26
COMMD4-224ENST00000568877 ZNF735P0CB33 412 aa13.42□□□□□ -0.26
COMMD4-224ENST00000568877 LINC00205P59089 165 aa13.42□□□□□ -0.26
COMMD4-224ENST00000568877 EBI3Q14213 229 aa13.42□□□□□ -0.26
COMMD4-224ENST00000568877 AADACL3Q5VUY0 350 aa13.42□□□□□ -0.26
COMMD4-224ENST00000568877 TRIQKQ629K1 86 aa13.42□□□□□ -0.26
COMMD4-224ENST00000568877 FAAP20Q6NZ36 180 aa13.42□□□□□ -0.26
COMMD4-224ENST00000568877 GLDNQ6ZMI3 551 aaPredicted RBP13.42□□□□□ -0.26
COMMD4-224ENST00000568877 LIAT1Q6ZQX7 453 aa13.42□□□□□ -0.26
COMMD4-224ENST00000568877 LHFPL1Q86WI0 220 aa13.42□□□□□ -0.26
COMMD4-224ENST00000568877 ZBTB34Q8NCN2 500 aa13.42□□□□□ -0.26
COMMD4-224ENST00000568877 FXYD6Q9H0Q3 95 aa13.42□□□□□ -0.26
COMMD4-224ENST00000568877 SETD2Q9BYW2 2564 aaPredicted RBP13.42□□□□□ -0.26
COMMD4-224ENST00000568877 GPR137BO60478 399 aa13.41□□□□□ -0.26
COMMD4-224ENST00000568877 GNRHRP30968 328 aa13.41□□□□□ -0.26
COMMD4-224ENST00000568877 MC5RP33032 325 aa13.41□□□□□ -0.26
COMMD4-224ENST00000568877 INPP1P49441 399 aa13.41□□□□□ -0.26
COMMD4-224ENST00000568877 THBS3P49746 956 aa13.41□□□□□ -0.26
COMMD4-224ENST00000568877 HES1Q14469 280 aa13.41□□□□□ -0.26
COMMD4-224ENST00000568877 FBLN7Q53RD9 439 aa13.41□□□□□ -0.26
COMMD4-224ENST00000568877 ZNF57Q68EA5 555 aaPredicted RBP13.41□□□□□ -0.26
COMMD4-224ENST00000568877 TMEM219Q86XT9 240 aa13.41□□□□□ -0.26
COMMD4-224ENST00000568877 ZNF383Q8NA42 475 aa13.41□□□□□ -0.26
COMMD4-224ENST00000568877 OR5AN1Q8NGI8 311 aa13.41□□□□□ -0.26
COMMD4-224ENST00000568877 OR2T10Q8NGZ9 312 aa13.41□□□□□ -0.26
COMMD4-224ENST00000568877 TERB2Q8NHR7 220 aa13.41□□□□□ -0.26
COMMD4-224ENST00000568877 ZFAND2BQ8WV99 257 aa13.41□□□□□ -0.26
COMMD4-224ENST00000568877 BORCS5Q969J3 196 aa13.41□□□□□ -0.26
COMMD4-224ENST00000568877 ADTRPQ96IZ2 230 aa13.41□□□□□ -0.26
COMMD4-224ENST00000568877 EAF1Q96JC9 268 aaPredicted RBP13.41□□□□□ -0.26
COMMD4-224ENST00000568877 AKR1E2Q96JD6 320 aa13.41□□□□□ -0.26
COMMD4-224ENST00000568877 WDR12Q9GZL7 423 aaKnown RBP13.41□□□□□ -0.26
COMMD4-224ENST00000568877 FAM181BA6NEQ2 426 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms