RNA–Protein interactions for RNA: ENST00000568539.1

SF3B3-212, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-212ENST00000568539 IGLV2-14P01704 120 aa6.84□□□□□ -1.31
SF3B3-212ENST00000568539 SAA2P0DJI9 122 aaPredicted RBP6.84□□□□□ -1.31
SF3B3-212ENST00000568539 HNF1AP20823 631 aa6.84□□□□□ -1.31
SF3B3-212ENST00000568539 IL3RAP26951 378 aa6.84□□□□□ -1.31
SF3B3-212ENST00000568539 CEACAM3P40198 252 aa6.84□□□□□ -1.31
SF3B3-212ENST00000568539 UCP3P55916 312 aa6.84□□□□□ -1.31
SF3B3-212ENST00000568539 LGALS4P56470 323 aa6.84□□□□□ -1.31
SF3B3-212ENST00000568539 FXYD4P59646 89 aa6.84□□□□□ -1.31
SF3B3-212ENST00000568539 DIAPH2-AS1Q14236 149 aa6.84□□□□□ -1.31
SF3B3-212ENST00000568539 TPTE2P1Q5T6R2 138 aa6.84□□□□□ -1.31
SF3B3-212ENST00000568539 C16orf87Q6PH81 154 aa6.84□□□□□ -1.31
SF3B3-212ENST00000568539 IDO2Q6ZQW0 420 aa6.84□□□□□ -1.31
SF3B3-212ENST00000568539 ZNF833PQ6ZTB9 187 aa6.84□□□□□ -1.31
SF3B3-212ENST00000568539 Q71RC1 249 aaPredicted RBP6.84□□□□□ -1.31
SF3B3-212ENST00000568539 DYNAPQ8N1N2 210 aa6.84□□□□□ -1.31
SF3B3-212ENST00000568539 ZNF645Q8N7E2 425 aa6.84□□□□□ -1.31
SF3B3-212ENST00000568539 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.84□□□□□ -1.31
SF3B3-212ENST00000568539 OR13C8Q8NGS7 320 aa6.84□□□□□ -1.31
SF3B3-212ENST00000568539 SECTM1Q8WVN6 248 aa6.84□□□□□ -1.31
SF3B3-212ENST00000568539 C17orf50Q8WW18 174 aa6.84□□□□□ -1.31
SF3B3-212ENST00000568539 TOMM40LQ969M1 308 aa6.84□□□□□ -1.31
SF3B3-212ENST00000568539 MALSU1Q96EH3 234 aa6.84□□□□□ -1.31
SF3B3-212ENST00000568539 C5orf30Q96GV9 206 aa6.84□□□□□ -1.31
SF3B3-212ENST00000568539 SLC5A7Q9GZV3 580 aa6.84□□□□□ -1.31
SF3B3-212ENST00000568539 PALMDQ9NP74 551 aa6.84□□□□□ -1.31
SF3B3-212ENST00000568539 SDHAF2Q9NX18 166 aa6.84□□□□□ -1.31
SF3B3-212ENST00000568539 PIPOXQ9P0Z9 390 aa6.84□□□□□ -1.31
SF3B3-212ENST00000568539 SCP2D1Q9UJQ7 156 aa6.84□□□□□ -1.31
SF3B3-212ENST00000568539 ZNF221Q9UK13 617 aa6.84□□□□□ -1.31
SF3B3-212ENST00000568539 RBM7Q9Y580 266 aaKnown RBP6.84□□□□□ -1.31
SF3B3-212ENST00000568539 SOX21Q9Y651 276 aaPredicted RBP6.84□□□□□ -1.31
SF3B3-212ENST00000568539 FLNAP21333 2647 aaKnown RBP6.84□□□□□ -1.31
SF3B3-212ENST00000568539 ARID1AO14497 2285 aa6.84□□□□□ -1.31
SF3B3-212ENST00000568539 A0A0U1RQK1 487 aa6.83□□□□□ -1.32
SF3B3-212ENST00000568539 OOSP1A8MZH6 123 aa6.83□□□□□ -1.32
SF3B3-212ENST00000568539 HSD17B6O14756 317 aa6.83□□□□□ -1.32
SF3B3-212ENST00000568539 SLC22A5O76082 557 aa6.83□□□□□ -1.32
SF3B3-212ENST00000568539 GNRHRP30968 328 aa6.83□□□□□ -1.32
SF3B3-212ENST00000568539 ECI1P42126 302 aa6.83□□□□□ -1.32
SF3B3-212ENST00000568539 GPR12P47775 334 aa6.83□□□□□ -1.32
SF3B3-212ENST00000568539 CCR6P51684 374 aa6.83□□□□□ -1.32
SF3B3-212ENST00000568539 ZNF816Q0VGE8 651 aaPredicted RBP6.83□□□□□ -1.32
SF3B3-212ENST00000568539 BAMBIQ13145 260 aa6.83□□□□□ -1.32
SF3B3-212ENST00000568539 EIF4EBP1Q13541 118 aaPredicted RBP6.83□□□□□ -1.32
SF3B3-212ENST00000568539 DCTN2Q13561 401 aaKnown RBP6.83□□□□□ -1.32
SF3B3-212ENST00000568539 SURF2Q15527 256 aaPredicted RBP6.83□□□□□ -1.32
SF3B3-212ENST00000568539 MSMO1Q15800 293 aa6.83□□□□□ -1.32
SF3B3-212ENST00000568539 RPL39P5Q59GN2 51 aa6.83□□□□□ -1.32
SF3B3-212ENST00000568539 FAM71F2Q6NXP2 309 aa6.83□□□□□ -1.32
SF3B3-212ENST00000568539 LPCAT3Q6P1A2 487 aa6.83□□□□□ -1.32
SF3B3-212ENST00000568539 ZNF818PQ6ZRF7 136 aa6.83□□□□□ -1.32
SF3B3-212ENST00000568539 DRAM1Q8N682 238 aa6.83□□□□□ -1.32
SF3B3-212ENST00000568539 MARCH1Q8TCQ1 289 aa6.83□□□□□ -1.32
SF3B3-212ENST00000568539 RTN4IP1Q8WWV3 396 aaPredicted RBP6.83□□□□□ -1.32
SF3B3-212ENST00000568539 MS4A7Q9GZW8 240 aaPredicted RBP6.83□□□□□ -1.32
SF3B3-212ENST00000568539 CCL28Q9NRJ3 127 aa6.83□□□□□ -1.32
SF3B3-212ENST00000568539 CDC42EP3Q9UKI2 254 aa6.83□□□□□ -1.32
SF3B3-212ENST00000568539 HILPDAQ9Y5L2 63 aa6.83□□□□□ -1.32
SF3B3-212ENST00000568539 ATRQ13535 2644 aa6.83□□□□□ -1.32
SF3B3-212ENST00000568539 MALRD1Q5VYJ5 2156 aa6.82□□□□□ -1.32
SF3B3-212ENST00000568539 A0A1W2PPI3 338 aa6.82□□□□□ -1.32
SF3B3-212ENST00000568539 INAFM1C9JVW0 142 aa6.82□□□□□ -1.32
SF3B3-212ENST00000568539 TXNL1O43396 289 aa6.82□□□□□ -1.32
SF3B3-212ENST00000568539 NDUFB6O95139 128 aa6.82□□□□□ -1.32
SF3B3-212ENST00000568539 GAPDHP04406 335 aaKnown RBP6.82□□□□□ -1.32
SF3B3-212ENST00000568539 PGAM2P15259 253 aa6.82□□□□□ -1.32
SF3B3-212ENST00000568539 PAX6P26367 422 aa6.82□□□□□ -1.32
SF3B3-212ENST00000568539 SLC6A1P30531 599 aa6.82□□□□□ -1.32
SF3B3-212ENST00000568539 SRP14P37108 136 aaKnown RBP6.82□□□□□ -1.32
SF3B3-212ENST00000568539 REG1BP48304 166 aa6.82□□□□□ -1.32
SF3B3-212ENST00000568539 DEFA1P59665 94 aa6.82□□□□□ -1.32
SF3B3-212ENST00000568539 DEFA3P59666 94 aa6.82□□□□□ -1.32
SF3B3-212ENST00000568539 SSX2Q16385 188 aa6.82□□□□□ -1.32
SF3B3-212ENST00000568539 PLA1AQ53H76 456 aa6.82□□□□□ -1.32
SF3B3-212ENST00000568539 MZT2BQ6NZ67 158 aa6.82□□□□□ -1.32
SF3B3-212ENST00000568539 TGIF2LXQ8IUE1 241 aa6.82□□□□□ -1.32
SF3B3-212ENST00000568539 SLC38A6Q8IZM9 456 aa6.82□□□□□ -1.32
SF3B3-212ENST00000568539 BCL6BQ8N143 479 aaPredicted RBP6.82□□□□□ -1.32
SF3B3-212ENST00000568539 POC5Q8NA72 575 aa6.82□□□□□ -1.32
SF3B3-212ENST00000568539 ZBTB34Q8NCN2 500 aa6.82□□□□□ -1.32
SF3B3-212ENST00000568539 BVESQ8NE79 360 aa6.82□□□□□ -1.32
SF3B3-212ENST00000568539 C22orf15Q8WYQ4 148 aa6.82□□□□□ -1.32
SF3B3-212ENST00000568539 RPEQ96AT9 228 aa6.82□□□□□ -1.32
SF3B3-212ENST00000568539 AKR1E2Q96JD6 320 aa6.82□□□□□ -1.32
SF3B3-212ENST00000568539 S1PR3Q99500 378 aa6.82□□□□□ -1.32
SF3B3-212ENST00000568539 SLC25A21Q9BQT8 299 aaPredicted RBP6.82□□□□□ -1.32
SF3B3-212ENST00000568539 BEX2Q9BXY8 128 aa6.82□□□□□ -1.32
SF3B3-212ENST00000568539 GPR132Q9UNW8 380 aa6.82□□□□□ -1.32
SF3B3-212ENST00000568539 IGHV1-3A0A0C4DH29 117 aa6.81□□□□□ -1.32
SF3B3-212ENST00000568539 MDFIC2A0A1B0GVS7 189 aa6.81□□□□□ -1.32
SF3B3-212ENST00000568539 VGLL3A8MV65 326 aa6.81□□□□□ -1.32
SF3B3-212ENST00000568539 M0R1X1 148 aa6.81□□□□□ -1.32
SF3B3-212ENST00000568539 GPR31O00270 319 aa6.81□□□□□ -1.32
SF3B3-212ENST00000568539 PGLYRP1O75594 196 aaPredicted RBP6.81□□□□□ -1.32
SF3B3-212ENST00000568539 CTSDP07339 412 aaPredicted RBP6.81□□□□□ -1.32
SF3B3-212ENST00000568539 FBP1P09467 338 aa6.81□□□□□ -1.32
SF3B3-212ENST00000568539 CT45A6P0DMU7 189 aa6.81□□□□□ -1.32
SF3B3-212ENST00000568539 CT45A5P0DMU8 189 aa6.81□□□□□ -1.32
SF3B3-212ENST00000568539 CT45A7P0DMV0 189 aa6.81□□□□□ -1.32
SF3B3-212ENST00000568539 PI3P19957 117 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms