RNA–Protein interactions for RNA: ENST00000568232.1

CLK3-222, Transcript of CDC like kinase 3, humanhuman

Gene CLK3, Length 958 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-222ENST00000568232 AQP12BA6NM10 295 aa8.71□□□□□ -1.02
CLK3-222ENST00000568232 SLC22A1O15245 554 aa8.71□□□□□ -1.02
CLK3-222ENST00000568232 SCAF4O95104 1147 aaKnown RBP8.71□□□□□ -1.02
CLK3-222ENST00000568232 RAB3AP20336 220 aa8.71□□□□□ -1.02
CLK3-222ENST00000568232 PJVKQ0ZLH3 352 aa8.71□□□□□ -1.02
CLK3-222ENST00000568232 MPV17LQ2QL34 196 aa8.71□□□□□ -1.02
CLK3-222ENST00000568232 TM4SF20Q53R12 229 aa8.71□□□□□ -1.02
CLK3-222ENST00000568232 SPATA24Q86W54 205 aa8.71□□□□□ -1.02
CLK3-222ENST00000568232 AQP12AQ8IXF9 295 aa8.71□□□□□ -1.02
CLK3-222ENST00000568232 Q8N3U1 123 aa8.71□□□□□ -1.02
CLK3-222ENST00000568232 C2CD4CQ8TF44 421 aa8.71□□□□□ -1.02
CLK3-222ENST00000568232 GHSRQ92847 366 aa8.71□□□□□ -1.02
CLK3-222ENST00000568232 USMG5Q96IX5 58 aa8.71□□□□□ -1.02
CLK3-222ENST00000568232 COA4Q9NYJ1 87 aa8.71□□□□□ -1.02
CLK3-222ENST00000568232 TECRQ9NZ01 308 aaKnown RBP8.71□□□□□ -1.02
CLK3-222ENST00000568232 JPT1Q9UK76 154 aa8.71□□□□□ -1.02
CLK3-222ENST00000568232 APLNQ9ULZ1 77 aa8.71□□□□□ -1.02
CLK3-222ENST00000568232 OR5H14A6NHG9 310 aa8.7□□□□□ -1.02
CLK3-222ENST00000568232 ZAR1LA6NP61 321 aa8.7□□□□□ -1.02
CLK3-222ENST00000568232 MCRIP1C9JLW8 97 aa8.7□□□□□ -1.02
CLK3-222ENST00000568232 H3BNX3 289 aa8.7□□□□□ -1.02
CLK3-222ENST00000568232 FAM229AH3BQW9 127 aa8.7□□□□□ -1.02
CLK3-222ENST00000568232 J3QLW9 94 aa8.7□□□□□ -1.02
CLK3-222ENST00000568232 YPEL1O60688 119 aa8.7□□□□□ -1.02
CLK3-222ENST00000568232 HLA-AP01891 365 aaKnown RBP8.7□□□□□ -1.02
CLK3-222ENST00000568232 MAS1P04201 325 aa8.7□□□□□ -1.02
CLK3-222ENST00000568232 IGKV1-16P04430 117 aa8.7□□□□□ -1.02
CLK3-222ENST00000568232 IFNA4P05014 189 aa8.7□□□□□ -1.02
CLK3-222ENST00000568232 FCGR1AP12314 374 aa8.7□□□□□ -1.02
CLK3-222ENST00000568232 ZNF19P17023 458 aa8.7□□□□□ -1.02
CLK3-222ENST00000568232 LGALS7P47929 136 aa8.7□□□□□ -1.02
CLK3-222ENST00000568232 LINC00205P59089 165 aa8.7□□□□□ -1.02
CLK3-222ENST00000568232 RBMS2Q15434 407 aaKnown RBP8.7□□□□□ -1.02
CLK3-222ENST00000568232 ZNF529Q6P280 563 aa8.7□□□□□ -1.02
CLK3-222ENST00000568232 LINC00596Q86U02 117 aa8.7□□□□□ -1.02
CLK3-222ENST00000568232 GAPTQ8N292 157 aa8.7□□□□□ -1.02
CLK3-222ENST00000568232 PQLC1Q8N2U9 271 aa8.7□□□□□ -1.02
CLK3-222ENST00000568232 GVQW1Q8N7I0 195 aa8.7□□□□□ -1.02
CLK3-222ENST00000568232 OR2AK2Q8NG84 335 aa8.7□□□□□ -1.02
CLK3-222ENST00000568232 PELI1Q96FA3 418 aa8.7□□□□□ -1.02
CLK3-222ENST00000568232 YPEL2Q96QA6 119 aa8.7□□□□□ -1.02
CLK3-222ENST00000568232 MBNL3Q9NUK0 354 aaKnown RBP8.7□□□□□ -1.02
CLK3-222ENST00000568232 TAS2R4Q9NYW5 299 aa8.7□□□□□ -1.02
CLK3-222ENST00000568232 IL36GQ9NZH8 169 aa8.7□□□□□ -1.02
CLK3-222ENST00000568232 WASHC3Q9Y3C0 194 aa8.7□□□□□ -1.02
CLK3-222ENST00000568232 FAM90A23PA8MXZ1 464 aa8.69□□□□□ -1.02
CLK3-222ENST00000568232 IGLL5B9A064 214 aa8.69□□□□□ -1.02
CLK3-222ENST00000568232 PPP5D1E7EU14 171 aa8.69□□□□□ -1.02
CLK3-222ENST00000568232 SLC16A6O15403 523 aa8.69□□□□□ -1.02
CLK3-222ENST00000568232 RBBP9O75884 186 aa8.69□□□□□ -1.02
CLK3-222ENST00000568232 PRH1P02810 166 aa8.69□□□□□ -1.02
CLK3-222ENST00000568232 CBLN1P23435 193 aa8.69□□□□□ -1.02
CLK3-222ENST00000568232 MC5RP33032 325 aa8.69□□□□□ -1.02
CLK3-222ENST00000568232 APOC4P55056 127 aa8.69□□□□□ -1.02
CLK3-222ENST00000568232 RPS16P62249 146 aaKnown RBP8.69□□□□□ -1.02
CLK3-222ENST00000568232 DMKNQ6E0U4 476 aaPredicted RBP8.69□□□□□ -1.02
CLK3-222ENST00000568232 RAB12Q6IQ22 244 aa8.69□□□□□ -1.02
CLK3-222ENST00000568232 TRAT1Q6PIZ9 186 aa8.69□□□□□ -1.02
CLK3-222ENST00000568232 DRAXINQ8NBI3 349 aaPredicted RBP8.69□□□□□ -1.02
CLK3-222ENST00000568232 OR5AN1Q8NGI8 311 aa8.69□□□□□ -1.02
CLK3-222ENST00000568232 KCNG3Q8TAE7 436 aa8.69□□□□□ -1.02
CLK3-222ENST00000568232 TSEN15Q8WW01 171 aaKnown RBP8.69□□□□□ -1.02
CLK3-222ENST00000568232 CPNE2Q96FN4 548 aaPredicted RBP8.69□□□□□ -1.02
CLK3-222ENST00000568232 ABHD14BQ96IU4 210 aa8.69□□□□□ -1.02
CLK3-222ENST00000568232 RNF5Q99942 180 aa8.69□□□□□ -1.02
CLK3-222ENST00000568232 MLXQ9UH92 298 aa8.69□□□□□ -1.02
CLK3-222ENST00000568232 ENOPH1Q9UHY7 261 aa8.69□□□□□ -1.02
CLK3-222ENST00000568232 ZNF230Q9UIE0 474 aaPredicted RBP8.69□□□□□ -1.02
CLK3-222ENST00000568232 AP4S1Q9Y587 144 aa8.69□□□□□ -1.02
CLK3-222ENST00000568232 DAPL1A0PJW8 107 aa8.68□□□□□ -1.02
CLK3-222ENST00000568232 UBE2QL1A1L167 161 aa8.68□□□□□ -1.02
CLK3-222ENST00000568232 RAB29O14966 203 aa8.68□□□□□ -1.02
CLK3-222ENST00000568232 SOX2P48431 317 aa8.68□□□□□ -1.02
CLK3-222ENST00000568232 HTD2P86397 168 aa8.68□□□□□ -1.02
CLK3-222ENST00000568232 EXOSC2Q13868 293 aaKnown RBP8.68□□□□□ -1.02
CLK3-222ENST00000568232 SLC22A6Q4U2R8 563 aa8.68□□□□□ -1.02
CLK3-222ENST00000568232 C6orf141Q5SZD1 244 aa8.68□□□□□ -1.02
CLK3-222ENST00000568232 OGFRL1Q5TC84 451 aaPredicted RBP8.68□□□□□ -1.02
CLK3-222ENST00000568232 ZNF57Q68EA5 555 aaPredicted RBP8.68□□□□□ -1.02
CLK3-222ENST00000568232 FAM71F2Q6NXP2 309 aa8.68□□□□□ -1.02
CLK3-222ENST00000568232 MAPKAPK5-AS1Q8N8E1 139 aa8.68□□□□□ -1.02
CLK3-222ENST00000568232 C11orf45Q8TAV5 145 aa8.68□□□□□ -1.02
CLK3-222ENST00000568232 FBLIM1Q8WUP2 373 aa8.68□□□□□ -1.02
CLK3-222ENST00000568232 PYDC1Q8WXC3 89 aa8.68□□□□□ -1.02
CLK3-222ENST00000568232 C4orf36Q96KX1 117 aa8.68□□□□□ -1.02
CLK3-222ENST00000568232 PDCD1LG2Q9BQ51 273 aa8.68□□□□□ -1.02
CLK3-222ENST00000568232 AKIP1Q9NQ31 210 aa8.68□□□□□ -1.02
CLK3-222ENST00000568232 KCNIP1Q9NZI2 227 aa8.68□□□□□ -1.02
CLK3-222ENST00000568232 PIPOXQ9P0Z9 390 aa8.68□□□□□ -1.02
CLK3-222ENST00000568232 UBQLN2Q9UHD9 624 aa8.68□□□□□ -1.02
CLK3-222ENST00000568232 DMRT1Q9Y5R6 373 aa8.68□□□□□ -1.02
CLK3-222ENST00000568232 PEX16Q9Y5Y5 336 aa8.68□□□□□ -1.02
CLK3-222ENST00000568232 M0R2N4 97 aa8.67□□□□□ -1.02
CLK3-222ENST00000568232 UBE2CO00762 179 aa8.67□□□□□ -1.02
CLK3-222ENST00000568232 OR2C1O95371 312 aa8.67□□□□□ -1.02
CLK3-222ENST00000568232 RPSAP08865 295 aaKnown RBP8.67□□□□□ -1.02
CLK3-222ENST00000568232 GTF2F2P13984 249 aa8.67□□□□□ -1.02
CLK3-222ENST00000568232 CPEP16870 476 aa8.67□□□□□ -1.02
CLK3-222ENST00000568232 RPL35AP18077 110 aaKnown RBP8.67□□□□□ -1.02
CLK3-222ENST00000568232 FCGR2BP31994 310 aaPredicted RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms