RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 FAM90A13PP0C7W8 464 aa7.51□□□□□ -1.21
CAPN3-216ENST00000567071 FAM90A14PP0C7W9 464 aa7.51□□□□□ -1.21
CAPN3-216ENST00000567071 FAM90A24PP0C7X0 464 aa7.51□□□□□ -1.21
CAPN3-216ENST00000567071 FUT3P21217 361 aa7.51□□□□□ -1.21
CAPN3-216ENST00000567071 HTR1DP28221 377 aa7.51□□□□□ -1.21
CAPN3-216ENST00000567071 PRDX2P32119 198 aa7.51□□□□□ -1.21
CAPN3-216ENST00000567071 GNG2P59768 71 aa7.51□□□□□ -1.21
CAPN3-216ENST00000567071 ZNF616Q08AN1 781 aa7.51□□□□□ -1.21
CAPN3-216ENST00000567071 FOXE3Q13461 319 aa7.51□□□□□ -1.21
CAPN3-216ENST00000567071 ARFRP1Q13795 201 aa7.51□□□□□ -1.21
CAPN3-216ENST00000567071 ATXN7L3Q14CW9 347 aaPredicted RBP7.51□□□□□ -1.21
CAPN3-216ENST00000567071 CDNFQ49AH0 187 aa7.51□□□□□ -1.21
CAPN3-216ENST00000567071 PYHIN1Q6K0P9 492 aa7.51□□□□□ -1.21
CAPN3-216ENST00000567071 Q8N1Y9 231 aa7.51□□□□□ -1.21
CAPN3-216ENST00000567071 STPG2Q8N412 459 aa7.51□□□□□ -1.21
CAPN3-216ENST00000567071 SUMF2Q8NBJ7 301 aa7.51□□□□□ -1.21
CAPN3-216ENST00000567071 ABHD1Q96SE0 405 aa7.51□□□□□ -1.21
CAPN3-216ENST00000567071 SOSTQ9BQB4 213 aa7.51□□□□□ -1.21
CAPN3-216ENST00000567071 FAAP24Q9BTP7 215 aa7.51□□□□□ -1.21
CAPN3-216ENST00000567071 DPCDQ9BVM2 203 aaPredicted RBP7.51□□□□□ -1.21
CAPN3-216ENST00000567071 WDR12Q9GZL7 423 aaKnown RBP7.51□□□□□ -1.21
CAPN3-216ENST00000567071 SRRQ9GZT4 340 aa7.51□□□□□ -1.21
CAPN3-216ENST00000567071 PLEKHJ1Q9NW61 149 aa7.51□□□□□ -1.21
CAPN3-216ENST00000567071 RCC2Q9P258 522 aaKnown RBP7.51□□□□□ -1.21
CAPN3-216ENST00000567071 AK3Q9UIJ7 227 aa7.51□□□□□ -1.21
CAPN3-216ENST00000567071 ZNF222Q9UK12 451 aa7.51□□□□□ -1.21
CAPN3-216ENST00000567071 KCNK7Q9Y2U2 307 aa7.51□□□□□ -1.21
CAPN3-216ENST00000567071 C17orf98A8MV24 154 aa7.5□□□□□ -1.21
CAPN3-216ENST00000567071 MCRIP1C9JLW8 97 aa7.5□□□□□ -1.21
CAPN3-216ENST00000567071 ELANEP08246 267 aa7.5□□□□□ -1.21
CAPN3-216ENST00000567071 GSTP1P09211 210 aaKnown RBP7.5□□□□□ -1.21
CAPN3-216ENST00000567071 LORP23490 312 aaPredicted RBP7.5□□□□□ -1.21
CAPN3-216ENST00000567071 OR3A1P47881 315 aa7.5□□□□□ -1.21
CAPN3-216ENST00000567071 ZNF45Q02386 682 aa7.5□□□□□ -1.21
CAPN3-216ENST00000567071 TMEM65Q6PI78 240 aa7.5□□□□□ -1.21
CAPN3-216ENST00000567071 OR1N2Q8NGR9 330 aa7.5□□□□□ -1.21
CAPN3-216ENST00000567071 OR52I2Q8NH67 350 aa7.5□□□□□ -1.21
CAPN3-216ENST00000567071 OR4C12Q96R67 309 aa7.5□□□□□ -1.21
CAPN3-216ENST00000567071 SDHCQ99643 169 aaPredicted RBP7.5□□□□□ -1.21
CAPN3-216ENST00000567071 HDHD3Q9BSH5 251 aaPredicted RBP7.5□□□□□ -1.21
CAPN3-216ENST00000567071 SPACA1Q9HBV2 294 aa7.5□□□□□ -1.21
CAPN3-216ENST00000567071 KIAA1456Q9P272 454 aa7.5□□□□□ -1.21
CAPN3-216ENST00000567071 DNAH11Q96DT5 4516 aa7.49□□□□□ -1.21
CAPN3-216ENST00000567071 AP4M1O00189 453 aa7.49□□□□□ -1.21
CAPN3-216ENST00000567071 SSX5O60225 188 aa7.49□□□□□ -1.21
CAPN3-216ENST00000567071 ZNF737O75373 536 aa7.49□□□□□ -1.21
CAPN3-216ENST00000567071 CD3GP09693 182 aa7.49□□□□□ -1.21
CAPN3-216ENST00000567071 OR8U9P0C7N5 309 aa7.49□□□□□ -1.21
CAPN3-216ENST00000567071 PTBP1P26599 531 aaKnown RBP eCLIP7.49□□□□□ -1.21
CAPN3-216ENST00000567071 CD40LGP29965 261 aa7.49□□□□□ -1.21
CAPN3-216ENST00000567071 PRSS3P35030 304 aa7.49□□□□□ -1.21
CAPN3-216ENST00000567071 PITPNAQ00169 270 aa7.49□□□□□ -1.21
CAPN3-216ENST00000567071 EDDM3AQ14507 147 aa7.49□□□□□ -1.21
CAPN3-216ENST00000567071 ZNF273Q14593 569 aa7.49□□□□□ -1.21
CAPN3-216ENST00000567071 RBMY1FQ15415 496 aaKnown RBP7.49□□□□□ -1.21
CAPN3-216ENST00000567071 GRK1Q15835 563 aa7.49□□□□□ -1.21
CAPN3-216ENST00000567071 HACD4Q5VWC8 232 aa7.49□□□□□ -1.21
CAPN3-216ENST00000567071 TRAPPC6BQ86SZ2 158 aa7.49□□□□□ -1.21
CAPN3-216ENST00000567071 OR8H2Q8N162 312 aa7.49□□□□□ -1.21
CAPN3-216ENST00000567071 Q8N402 240 aa7.49□□□□□ -1.21
CAPN3-216ENST00000567071 MAPKAPK5-AS1Q8N8E1 139 aa7.49□□□□□ -1.21
CAPN3-216ENST00000567071 PLPPR1Q8TBJ4 325 aa7.49□□□□□ -1.21
CAPN3-216ENST00000567071 SETD6Q8TBK2 473 aa7.49□□□□□ -1.21
CAPN3-216ENST00000567071 SMIM4Q8WVI0 70 aa7.49□□□□□ -1.21
CAPN3-216ENST00000567071 MAFIPQ8WZ33 124 aa7.49□□□□□ -1.21
CAPN3-216ENST00000567071 DCUN1D4Q92564 292 aa7.49□□□□□ -1.21
CAPN3-216ENST00000567071 SDSLQ96GA7 329 aa7.49□□□□□ -1.21
CAPN3-216ENST00000567071 CMSS1Q9BQ75 279 aaKnown RBP7.49□□□□□ -1.21
CAPN3-216ENST00000567071 IFT22Q9H7X7 185 aa7.49□□□□□ -1.21
CAPN3-216ENST00000567071 CHMP1AQ9HD42 196 aaPredicted RBP7.49□□□□□ -1.21
CAPN3-216ENST00000567071 ETAA1Q9NY74 926 aa7.49□□□□□ -1.21
CAPN3-216ENST00000567071 DPM3Q9P2X0 92 aa7.49□□□□□ -1.21
CAPN3-216ENST00000567071 RABL2AQ9UBK7 228 aaPredicted RBP7.49□□□□□ -1.21
CAPN3-216ENST00000567071 HSF4Q9ULV5 492 aa7.49□□□□□ -1.21
CAPN3-216ENST00000567071 RABL2BQ9UNT1 228 aa7.49□□□□□ -1.21
CAPN3-216ENST00000567071 IGHV2-26A0A0B4J1V2 119 aa7.48□□□□□ -1.21
CAPN3-216ENST00000567071 TRAV39A0A0B4J263 110 aa7.48□□□□□ -1.21
CAPN3-216ENST00000567071 A0A1B0GVY2 172 aa7.48□□□□□ -1.21
CAPN3-216ENST00000567071 MEX3AA1L020 520 aaKnown RBP7.48□□□□□ -1.21
CAPN3-216ENST00000567071 LANCL1O43813 399 aa7.48□□□□□ -1.21
CAPN3-216ENST00000567071 BRI3O95415 125 aa7.48□□□□□ -1.21
CAPN3-216ENST00000567071 FAM106CPP0CH98 169 aa7.48□□□□□ -1.21
CAPN3-216ENST00000567071 ZNF728P0DKX0 622 aa7.48□□□□□ -1.21
CAPN3-216ENST00000567071 PPP5CP53041 499 aa7.48□□□□□ -1.21
CAPN3-216ENST00000567071 MRPS15P82914 257 aaKnown RBP7.48□□□□□ -1.21
CAPN3-216ENST00000567071 AESQ08117 197 aa7.48□□□□□ -1.21
CAPN3-216ENST00000567071 RBM39Q14498 530 aaKnown RBP7.48□□□□□ -1.21
CAPN3-216ENST00000567071 ARL6IP1Q15041 203 aa7.48□□□□□ -1.21
CAPN3-216ENST00000567071 BAK1Q16611 211 aa7.48□□□□□ -1.21
CAPN3-216ENST00000567071 TRIQKQ629K1 86 aa7.48□□□□□ -1.21
CAPN3-216ENST00000567071 GTSCR1Q86UQ5 136 aa7.48□□□□□ -1.21
CAPN3-216ENST00000567071 ZNF561Q8N587 486 aa7.48□□□□□ -1.21
CAPN3-216ENST00000567071 TPRX1Q8N7U7 411 aa7.48□□□□□ -1.21
CAPN3-216ENST00000567071 GDPD1Q8N9F7 314 aa7.48□□□□□ -1.21
CAPN3-216ENST00000567071 GPX8Q8TED1 209 aa7.48□□□□□ -1.21
CAPN3-216ENST00000567071 C15orf40Q8WUR7 153 aa7.48□□□□□ -1.21
CAPN3-216ENST00000567071 FCAMRQ8WWV6 532 aa7.48□□□□□ -1.21
CAPN3-216ENST00000567071 COQ2Q96H96 371 aa7.48□□□□□ -1.21
CAPN3-216ENST00000567071 SNX22Q96L94 193 aa7.48□□□□□ -1.21
CAPN3-216ENST00000567071 CLEC7AQ9BXN2 247 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms