RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 PPP1CBP62140 327 aa13.23□□□□□ -0.29
COMMD4-215ENST00000566843 VWC2Q2TAL6 325 aa13.23□□□□□ -0.29
COMMD4-215ENST00000566843 Q6P435 159 aa13.23□□□□□ -0.29
COMMD4-215ENST00000566843 FAM58AQ8N1B3 248 aa13.23□□□□□ -0.29
COMMD4-215ENST00000566843 TMEM256Q8N2U0 113 aa13.23□□□□□ -0.29
COMMD4-215ENST00000566843 IL1F10Q8WWZ1 152 aa13.23□□□□□ -0.29
COMMD4-215ENST00000566843 APOBEC3DQ96AK3 386 aaPredicted RBP13.23□□□□□ -0.29
COMMD4-215ENST00000566843 WFIKKN1Q96NZ8 548 aa13.23□□□□□ -0.29
COMMD4-215ENST00000566843 A0A0U1RQK1 487 aa13.22□□□□□ -0.29
COMMD4-215ENST00000566843 ZNF320A2RRD8 509 aa13.22□□□□□ -0.29
COMMD4-215ENST00000566843 MARCH11A6NNE9 402 aa13.22□□□□□ -0.29
COMMD4-215ENST00000566843 GALR2O43603 387 aaPredicted RBP13.22□□□□□ -0.29
COMMD4-215ENST00000566843 YPEL1O60688 119 aa13.22□□□□□ -0.29
COMMD4-215ENST00000566843 CRYABP02511 175 aaKnown RBP13.22□□□□□ -0.29
COMMD4-215ENST00000566843 UBE2NP61088 152 aaKnown RBP13.22□□□□□ -0.29
COMMD4-215ENST00000566843 GAGE1Q13065 139 aa13.22□□□□□ -0.29
COMMD4-215ENST00000566843 TMEM249Q2WGJ8 235 aa13.22□□□□□ -0.29
COMMD4-215ENST00000566843 ZNF573Q86YE8 665 aa13.22□□□□□ -0.29
COMMD4-215ENST00000566843 MS4A10Q96PG2 267 aa13.22□□□□□ -0.29
COMMD4-215ENST00000566843 YPEL2Q96QA6 119 aa13.22□□□□□ -0.29
COMMD4-215ENST00000566843 ZNF552Q9H707 407 aaPredicted RBP13.22□□□□□ -0.29
COMMD4-215ENST00000566843 LY6G6EA0A0G2JKS1 128 aa13.22□□□□□ -0.29
COMMD4-215ENST00000566843 A0A0G2JMM0 328 aa13.22□□□□□ -0.29
COMMD4-215ENST00000566843 A0A1W2PPB8 328 aa13.22□□□□□ -0.29
COMMD4-215ENST00000566843 A0A1W2PRS3 328 aa13.22□□□□□ -0.29
COMMD4-215ENST00000566843 KIR3DP1A8MWS1 328 aa13.22□□□□□ -0.29
COMMD4-215ENST00000566843 C1QTNF9BB2RNN3 333 aa13.22□□□□□ -0.29
COMMD4-215ENST00000566843 NUPR1O60356 82 aa13.22□□□□□ -0.29
COMMD4-215ENST00000566843 ZNF16P17020 682 aaPredicted RBP13.22□□□□□ -0.29
COMMD4-215ENST00000566843 SOX8P57073 446 aa13.22□□□□□ -0.29
COMMD4-215ENST00000566843 DRAM1Q8N682 238 aa13.22□□□□□ -0.29
COMMD4-215ENST00000566843 ZCCHC14Q8WYQ9 949 aaKnown RBP13.22□□□□□ -0.29
COMMD4-215ENST00000566843 DIRC2Q96SL1 478 aa13.22□□□□□ -0.29
COMMD4-215ENST00000566843 C20orf144Q9BQM9 153 aa13.22□□□□□ -0.29
COMMD4-215ENST00000566843 OCIAD1Q9NX40 245 aa13.22□□□□□ -0.29
COMMD4-215ENST00000566843 U3KQA8 63 aa13.22□□□□□ -0.29
COMMD4-215ENST00000566843 RNF212BA8MTL3 300 aa13.21□□□□□ -0.29
COMMD4-215ENST00000566843 C11orf94C9JXX5 98 aa13.21□□□□□ -0.29
COMMD4-215ENST00000566843 DLEU1O43261 78 aa13.21□□□□□ -0.29
COMMD4-215ENST00000566843 YPEL3P61236 119 aaPredicted RBP13.21□□□□□ -0.29
COMMD4-215ENST00000566843 GNB1P62873 340 aa13.21□□□□□ -0.29
COMMD4-215ENST00000566843 ARF1P84077 181 aaKnown RBP13.21□□□□□ -0.29
COMMD4-215ENST00000566843 LINC00470Q9BZP3 86 aa13.21□□□□□ -0.29
COMMD4-215ENST00000566843 PKIBQ9C010 78 aa13.21□□□□□ -0.29
COMMD4-215ENST00000566843 PLA2G3Q9NZ20 509 aa13.21□□□□□ -0.29
COMMD4-215ENST00000566843 KCNS2Q9ULS6 477 aa13.21□□□□□ -0.29
COMMD4-215ENST00000566843 CABIN1Q9Y6J0 2220 aa13.21□□□□□ -0.29
COMMD4-215ENST00000566843 TTC28Q96AY4 2481 aa13.21□□□□□ -0.29
COMMD4-215ENST00000566843 NCKAP5O14513 1909 aa13.21□□□□□ -0.3
COMMD4-215ENST00000566843 OR5B21A6NL26 309 aa13.2□□□□□ -0.3
COMMD4-215ENST00000566843 PDE6DO43924 150 aa13.2□□□□□ -0.3
COMMD4-215ENST00000566843 HPRT1P00492 218 aa13.2□□□□□ -0.3
COMMD4-215ENST00000566843 SERPINA7P05543 415 aa13.2□□□□□ -0.3
COMMD4-215ENST00000566843 GCH1P30793 250 aa13.2□□□□□ -0.3
COMMD4-215ENST00000566843 TFF3Q07654 80 aa13.2□□□□□ -0.3
COMMD4-215ENST00000566843 SGCZQ96LD1 299 aa13.2□□□□□ -0.3
COMMD4-215ENST00000566843 TBX15Q96SF7 602 aa13.2□□□□□ -0.3
COMMD4-215ENST00000566843 NPCDR1Q9BY65 106 aa13.2□□□□□ -0.3
COMMD4-215ENST00000566843 PRRG4Q9BZD6 226 aa13.2□□□□□ -0.3
COMMD4-215ENST00000566843 ELOVL5Q9NYP7 299 aa13.2□□□□□ -0.3
COMMD4-215ENST00000566843 ZNF407Q9C0G0 2248 aa13.2□□□□□ -0.3
COMMD4-215ENST00000566843 C5orf49A4QMS7 147 aa13.2□□□□□ -0.3
COMMD4-215ENST00000566843 RPLP1P05386 114 aaKnown RBP13.2□□□□□ -0.3
COMMD4-215ENST00000566843 CCNOP22674 350 aa13.2□□□□□ -0.3
COMMD4-215ENST00000566843 MPLP40238 635 aa13.2□□□□□ -0.3
COMMD4-215ENST00000566843 SELENOTP62341 195 aa13.2□□□□□ -0.3
COMMD4-215ENST00000566843 MSMO1Q15800 293 aa13.2□□□□□ -0.3
COMMD4-215ENST00000566843 LYSMD4Q5XG99 296 aa13.2□□□□□ -0.3
COMMD4-215ENST00000566843 ZNF497Q6ZNH5 498 aa13.2□□□□□ -0.3
COMMD4-215ENST00000566843 AGBL5Q8NDL9 886 aa13.2□□□□□ -0.3
COMMD4-215ENST00000566843 ABHD3Q8WU67 409 aa13.2□□□□□ -0.3
COMMD4-215ENST00000566843 TMEM208Q9BTX3 173 aa13.2□□□□□ -0.3
COMMD4-215ENST00000566843 A0A1B0GUS0 222 aa13.19□□□□□ -0.3
COMMD4-215ENST00000566843 TNFSF13O75888 250 aa13.19□□□□□ -0.3
COMMD4-215ENST00000566843 SYNGR4O95473 234 aa13.19□□□□□ -0.3
COMMD4-215ENST00000566843 ESDP10768 282 aa13.19□□□□□ -0.3
COMMD4-215ENST00000566843 CCL2P13500 99 aa13.19□□□□□ -0.3
COMMD4-215ENST00000566843 OR3A1P47881 315 aa13.19□□□□□ -0.3
COMMD4-215ENST00000566843 GNG3P63215 75 aa13.19□□□□□ -0.3
COMMD4-215ENST00000566843 PMP22Q01453 160 aa13.19□□□□□ -0.3
COMMD4-215ENST00000566843 PMS2CLQ68D20 193 aa13.19□□□□□ -0.3
COMMD4-215ENST00000566843 TEX43Q6ZNM6 134 aa13.19□□□□□ -0.3
COMMD4-215ENST00000566843 NUFIP2Q7Z417 695 aaKnown RBP13.19□□□□□ -0.3
COMMD4-215ENST00000566843 OR10P1Q8NGE3 313 aa13.19□□□□□ -0.3
COMMD4-215ENST00000566843 THOC3Q96J01 351 aaKnown RBP13.19□□□□□ -0.3
COMMD4-215ENST00000566843 CHODLQ9H9P2 273 aa13.19□□□□□ -0.3
COMMD4-215ENST00000566843 FSCN3Q9NQT6 498 aa13.19□□□□□ -0.3
COMMD4-215ENST00000566843 RBM7Q9Y580 266 aaKnown RBP13.19□□□□□ -0.3
COMMD4-215ENST00000566843 MPC1Q9Y5U8 109 aa13.19□□□□□ -0.3
COMMD4-215ENST00000566843 SPEGQ15772 3267 aa13.19□□□□□ -0.3
COMMD4-215ENST00000566843 TRAV39A0A0B4J263 110 aa13.19□□□□□ -0.3
COMMD4-215ENST00000566843 LRRC30A6NM36 301 aa13.19□□□□□ -0.3
COMMD4-215ENST00000566843 ZNF705FA8MVS1 300 aaPredicted RBP13.19□□□□□ -0.3
COMMD4-215ENST00000566843 F6UZH7 168 aa13.19□□□□□ -0.3
COMMD4-215ENST00000566843 ZNHIT1O43257 154 aa13.19□□□□□ -0.3
COMMD4-215ENST00000566843 WDR1O75083 606 aa13.19□□□□□ -0.3
COMMD4-215ENST00000566843 KLF7O75840 302 aaPredicted RBP13.19□□□□□ -0.3
COMMD4-215ENST00000566843 ZNF705DP0CH99 300 aaPredicted RBP13.19□□□□□ -0.3
COMMD4-215ENST00000566843 ZNF705BP0CI00 300 aaPredicted RBP13.19□□□□□ -0.3
COMMD4-215ENST00000566843 PAFAH1B2P68402 229 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms