RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 TRBV6-6A0A0A6YYG2 114 aa6.6□□□□□ -1.35
CAPN3-213ENST00000565173 OR5H14A6NHG9 310 aa6.6□□□□□ -1.35
CAPN3-213ENST00000565173 TRIM64CA6NLI5 447 aa6.6□□□□□ -1.35
CAPN3-213ENST00000565173 FOXI3A8MTJ6 420 aaPredicted RBP6.6□□□□□ -1.35
CAPN3-213ENST00000565173 SOCS1O15524 211 aa6.6□□□□□ -1.35
CAPN3-213ENST00000565173 RGS10O43665 173 aa6.6□□□□□ -1.35
CAPN3-213ENST00000565173 SAP30O75446 220 aa6.6□□□□□ -1.35
CAPN3-213ENST00000565173 HSPB1P04792 205 aaKnown RBP6.6□□□□□ -1.35
CAPN3-213ENST00000565173 LGALS1P09382 135 aaKnown RBP6.6□□□□□ -1.35
CAPN3-213ENST00000565173 FRMD6-AS1P0C7T7 363 aa6.6□□□□□ -1.35
CAPN3-213ENST00000565173 GP9P14770 177 aa6.6□□□□□ -1.35
CAPN3-213ENST00000565173 MC5RP33032 325 aa6.6□□□□□ -1.35
CAPN3-213ENST00000565173 TMEM50BP56557 158 aa6.6□□□□□ -1.35
CAPN3-213ENST00000565173 SSBP2P81877 361 aaPredicted RBP6.6□□□□□ -1.35
CAPN3-213ENST00000565173 GLT8D1Q68CQ7 371 aa6.6□□□□□ -1.35
CAPN3-213ENST00000565173 ZNF562Q6V9R5 426 aa6.6□□□□□ -1.35
CAPN3-213ENST00000565173 OVCH2Q7RTZ1 564 aa6.6□□□□□ -1.35
CAPN3-213ENST00000565173 PPP1R27Q86WC6 154 aa6.6□□□□□ -1.35
CAPN3-213ENST00000565173 MS4A15Q8N5U1 240 aa6.6□□□□□ -1.35
CAPN3-213ENST00000565173 TCTEX1D1Q8N7M0 179 aa6.6□□□□□ -1.35
CAPN3-213ENST00000565173 ZNF383Q8NA42 475 aa6.6□□□□□ -1.35
CAPN3-213ENST00000565173 KCNG3Q8TAE7 436 aa6.6□□□□□ -1.35
CAPN3-213ENST00000565173 ARPC1AQ92747 370 aa6.6□□□□□ -1.35
CAPN3-213ENST00000565173 PTX4Q96A99 478 aa6.6□□□□□ -1.35
CAPN3-213ENST00000565173 RCHY1Q96PM5 261 aa6.6□□□□□ -1.35
CAPN3-213ENST00000565173 GFI1Q99684 422 aa6.6□□□□□ -1.35
CAPN3-213ENST00000565173 RNF5Q99942 180 aa6.6□□□□□ -1.35
CAPN3-213ENST00000565173 HDHD3Q9BSH5 251 aaPredicted RBP6.6□□□□□ -1.35
CAPN3-213ENST00000565173 FAM103A1Q9BTL3 118 aaKnown RBP6.6□□□□□ -1.35
CAPN3-213ENST00000565173 TMEM59Q9BXS4 323 aa6.6□□□□□ -1.35
CAPN3-213ENST00000565173 LPAR5Q9H1C0 372 aa6.6□□□□□ -1.35
CAPN3-213ENST00000565173 GHITMQ9H3K2 345 aa6.6□□□□□ -1.35
CAPN3-213ENST00000565173 DUSP21Q9H596 190 aa6.6□□□□□ -1.35
CAPN3-213ENST00000565173 ABRACLQ9P1F3 81 aa6.6□□□□□ -1.35
CAPN3-213ENST00000565173 OR1A1Q9P1Q5 309 aa6.6□□□□□ -1.35
CAPN3-213ENST00000565173 AK3Q9UIJ7 227 aa6.6□□□□□ -1.35
CAPN3-213ENST00000565173 LSM2Q9Y333 95 aaKnown RBP6.6□□□□□ -1.35
CAPN3-213ENST00000565173 A3GALT2U3KPV4 340 aa6.6□□□□□ -1.35
CAPN3-213ENST00000565173 EPPK1P58107 5090 aaKnown RBP6.59□□□□□ -1.35
CAPN3-213ENST00000565173 IGKV1-6A0A0C4DH72 117 aa6.59□□□□□ -1.35
CAPN3-213ENST00000565173 IGHV3-11P01762 117 aa6.59□□□□□ -1.35
CAPN3-213ENST00000565173 IGKV1-16P04430 117 aa6.59□□□□□ -1.35
CAPN3-213ENST00000565173 GSTP1P09211 210 aaKnown RBP6.59□□□□□ -1.35
CAPN3-213ENST00000565173 SCTP09683 121 aa6.59□□□□□ -1.35
CAPN3-213ENST00000565173 UCHL1P09936 223 aa6.59□□□□□ -1.35
CAPN3-213ENST00000565173 ZBTB25P24278 435 aa6.59□□□□□ -1.35
CAPN3-213ENST00000565173 CEACAM6P40199 344 aa6.59□□□□□ -1.35
CAPN3-213ENST00000565173 TMEM267Q0VDI3 215 aaPredicted RBP6.59□□□□□ -1.35
CAPN3-213ENST00000565173 PSG5Q15238 335 aa6.59□□□□□ -1.35
CAPN3-213ENST00000565173 ACTBL2Q562R1 376 aa6.59□□□□□ -1.35
CAPN3-213ENST00000565173 PYHIN1Q6K0P9 492 aa6.59□□□□□ -1.35
CAPN3-213ENST00000565173 CEACAM19Q7Z692 300 aa6.59□□□□□ -1.35
CAPN3-213ENST00000565173 Q8N1Y9 231 aa6.59□□□□□ -1.35
CAPN3-213ENST00000565173 DRAXINQ8NBI3 349 aaPredicted RBP6.59□□□□□ -1.35
CAPN3-213ENST00000565173 LFNGQ8NES3 379 aa6.59□□□□□ -1.35
CAPN3-213ENST00000565173 MS4A10Q96PG2 267 aa6.59□□□□□ -1.35
CAPN3-213ENST00000565173 TMED9Q9BVK6 235 aa6.59□□□□□ -1.35
CAPN3-213ENST00000565173 MND1Q9BWT6 205 aa6.59□□□□□ -1.35
CAPN3-213ENST00000565173 RIMS4Q9H426 269 aaPredicted RBP6.59□□□□□ -1.35
CAPN3-213ENST00000565173 PLEKHJ1Q9NW61 149 aa6.59□□□□□ -1.35
CAPN3-213ENST00000565173 WASHC3Q9Y3C0 194 aa6.59□□□□□ -1.35
CAPN3-213ENST00000565173 H7C2Y5 167 aa6.58□□□□□ -1.36
CAPN3-213ENST00000565173 ARPC1BO15143 372 aaKnown RBP6.58□□□□□ -1.36
CAPN3-213ENST00000565173 RBBP9O75884 186 aa6.58□□□□□ -1.36
CAPN3-213ENST00000565173 BPNT1O95861 308 aa6.58□□□□□ -1.36
CAPN3-213ENST00000565173 CA2P00918 260 aa6.58□□□□□ -1.36
CAPN3-213ENST00000565173 OR8U9P0C7N5 309 aa6.58□□□□□ -1.36
CAPN3-213ENST00000565173 MAP2K4P45985 399 aa6.58□□□□□ -1.36
CAPN3-213ENST00000565173 GABARAPL2P60520 117 aa6.58□□□□□ -1.36
CAPN3-213ENST00000565173 HLA-DRB3P79483 266 aa6.58□□□□□ -1.36
CAPN3-213ENST00000565173 IRF3Q14653 427 aa6.58□□□□□ -1.36
CAPN3-213ENST00000565173 PLGLAQ15195 96 aa6.58□□□□□ -1.36
CAPN3-213ENST00000565173 SPHARQ15513 63 aa6.58□□□□□ -1.36
CAPN3-213ENST00000565173 MED22Q15528 200 aa6.58□□□□□ -1.36
CAPN3-213ENST00000565173 HSD17B12Q53GQ0 312 aa6.58□□□□□ -1.36
CAPN3-213ENST00000565173 UNQ5815/PRO19632Q6UWF5 114 aa6.58□□□□□ -1.36
CAPN3-213ENST00000565173 TMEM91Q6ZNR0 172 aa6.58□□□□□ -1.36
CAPN3-213ENST00000565173 PRSS48Q7RTY5 328 aa6.58□□□□□ -1.36
CAPN3-213ENST00000565173 OR6M1Q8NGM8 313 aa6.58□□□□□ -1.36
CAPN3-213ENST00000565173 OR6Q1Q8NGQ2 317 aa6.58□□□□□ -1.36
CAPN3-213ENST00000565173 SETD6Q8TBK2 473 aa6.58□□□□□ -1.36
CAPN3-213ENST00000565173 CLCC1Q96S66 551 aa6.58□□□□□ -1.36
CAPN3-213ENST00000565173 TM2D3Q9BRN9 247 aa6.58□□□□□ -1.36
CAPN3-213ENST00000565173 YTHDF1Q9BYJ9 559 aaKnown RBP6.58□□□□□ -1.36
CAPN3-213ENST00000565173 CHMP1AQ9HD42 196 aaPredicted RBP6.58□□□□□ -1.36
CAPN3-213ENST00000565173 Q9N2K0 584 aa6.58□□□□□ -1.36
CAPN3-213ENST00000565173 METTL1Q9UBP6 276 aaKnown RBP6.58□□□□□ -1.36
CAPN3-213ENST00000565173 RNF150Q9ULK6 438 aa6.58□□□□□ -1.36
CAPN3-213ENST00000565173 HSF4Q9ULV5 492 aa6.58□□□□□ -1.36
CAPN3-213ENST00000565173 HYDINQ4G0P3 5121 aa6.58□□□□□ -1.36
CAPN3-213ENST00000565173 A8MZ25 164 aa6.57□□□□□ -1.36
CAPN3-213ENST00000565173 SLC17A2O00624 439 aa6.57□□□□□ -1.36
CAPN3-213ENST00000565173 SPDEFO95238 335 aa6.57□□□□□ -1.36
CAPN3-213ENST00000565173 IGLV1-51P01701 117 aa6.57□□□□□ -1.36
CAPN3-213ENST00000565173 IGLV2-23P01705 113 aa6.57□□□□□ -1.36
CAPN3-213ENST00000565173 TRGV3P03979 118 aa6.57□□□□□ -1.36
CAPN3-213ENST00000565173 TFAP2AP05549 437 aa6.57□□□□□ -1.36
CAPN3-213ENST00000565173 CRYGBP07316 175 aa6.57□□□□□ -1.36
CAPN3-213ENST00000565173 HSMCR30P0CW71 290 aa6.57□□□□□ -1.36
CAPN3-213ENST00000565173 IGHV4-30-4P0DP06 118 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms