RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 SMIM3Q9BZL3 60 aa6.07□□□□□ -1.44
HERPUD1-209ENST00000564678 WFDC1Q9HC57 220 aa6.07□□□□□ -1.44
HERPUD1-209ENST00000564678 UQCC1Q9NVA1 299 aa6.07□□□□□ -1.44
HERPUD1-209ENST00000564678 OR14J1Q9UGF5 321 aa6.07□□□□□ -1.44
HERPUD1-209ENST00000564678 CARHSP1Q9Y2V2 147 aaKnown RBP6.07□□□□□ -1.44
HERPUD1-209ENST00000564678 CHTOPQ9Y3Y2 248 aaKnown RBP6.07□□□□□ -1.44
HERPUD1-209ENST00000564678 RNF115Q9Y4L5 304 aa6.07□□□□□ -1.44
HERPUD1-209ENST00000564678 SVILO95425 2214 aa6.07□□□□□ -1.44
HERPUD1-209ENST00000564678 FAM24AA6NFZ4 105 aa6.07□□□□□ -1.44
HERPUD1-209ENST00000564678 UMAD1C9J7I0 102 aa6.07□□□□□ -1.44
HERPUD1-209ENST00000564678 PROB1E7EW31 1015 aa6.07□□□□□ -1.44
HERPUD1-209ENST00000564678 ABCD4O14678 606 aa6.07□□□□□ -1.44
HERPUD1-209ENST00000564678 TNFSF12O43508 249 aa6.07□□□□□ -1.44
HERPUD1-209ENST00000564678 OR8U9P0C7N5 309 aa6.07□□□□□ -1.44
HERPUD1-209ENST00000564678 PSG2P11465 335 aa6.07□□□□□ -1.44
HERPUD1-209ENST00000564678 IL2RGP31785 369 aa6.07□□□□□ -1.44
HERPUD1-209ENST00000564678 LPAR6P43657 344 aa6.07□□□□□ -1.44
HERPUD1-209ENST00000564678 RPS23P62266 143 aaKnown RBP6.07□□□□□ -1.44
HERPUD1-209ENST00000564678 KIAA2026Q5HYC2 2103 aa6.07□□□□□ -1.44
HERPUD1-209ENST00000564678 ZNF826PQ6ZT77 177 aa6.07□□□□□ -1.44
HERPUD1-209ENST00000564678 SSX8Q7RTT4 187 aa6.07□□□□□ -1.44
HERPUD1-209ENST00000564678 ZNF645Q8N7E2 425 aa6.07□□□□□ -1.44
HERPUD1-209ENST00000564678 OR8U1Q8NH10 309 aa6.07□□□□□ -1.44
HERPUD1-209ENST00000564678 OCC1Q8TAD7 63 aa6.07□□□□□ -1.44
HERPUD1-209ENST00000564678 EDARADDQ8WWZ3 215 aa6.07□□□□□ -1.44
HERPUD1-209ENST00000564678 GPR146Q96CH1 333 aa6.07□□□□□ -1.44
HERPUD1-209ENST00000564678 TSNAXQ99598 290 aaKnown RBP6.07□□□□□ -1.44
HERPUD1-209ENST00000564678 COA4Q9NYJ1 87 aa6.07□□□□□ -1.44
HERPUD1-209ENST00000564678 CACNA1DQ01668 2161 aa6.07□□□□□ -1.44
HERPUD1-209ENST00000564678 LOC400499M0QZD8 3231 aa6.07□□□□□ -1.44
HERPUD1-209ENST00000564678 PRR14LQ5THK1 2151 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 IGLV3-9A0A075B6K5 115 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 SRRM5B3KS81 715 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 C12orf77C9JDV5 145 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 FAM90A26D6RGX4 464 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 WNT9BO14905 357 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 CHST1O43916 411 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 CD5P06127 495 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 ADH4P08319 380 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 GZMHP20718 246 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 OR3A1P47881 315 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 DVL1P1P54792 670 aaPredicted RBP6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 SELENOVP59797 346 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 RPL23AP62750 156 aaKnown RBP6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 ADORA2A-AS1P86434 159 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 DEFA5Q01523 94 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 PRAMEF6Q5VXH4 476 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 CCDC144NLQ6NUI1 221 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 Q6ZRG5 221 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 DRAM1Q8N682 238 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 OR51H1Q8NH63 302 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 S100PBPQ96BU1 408 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 BSCL2Q96G97 398 aaPredicted RBP6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 GPHA2Q96T91 129 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 NKX6-2Q9C056 277 aaPredicted RBP6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 MSL2Q9HCI7 577 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 TREM1Q9NP99 234 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 PLA2G2EQ9NZK7 142 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 CACFD1Q9UGQ2 172 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 WSB1Q9Y6I7 421 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 RIF1Q5UIP0 2472 aaKnown RBP6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 IGSF23A1L1A6 192 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 KIAA1324LA8MWY0 1029 aaPredicted RBP6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 F8W036 122 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 RNASEK-C17orf49H0YIS7 233 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 SSSCA1O60232 199 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 DFFBO76075 338 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 IGKV1-39P01597 117 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 HBZP02008 142 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 IGKV1D-39P04432 117 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 PRDX2P32119 198 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 GABRA2P47869 451 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 KLF3P57682 345 aaPredicted RBP6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 TAS2R30P59541 319 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 COL10A1Q03692 680 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 AESQ08117 197 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 CATR1Q13166 79 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 GAMTQ14353 236 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 ZNF585BQ52M93 769 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 FAM90A2PQ658T7 463 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 BOLLQ8N9W6 283 aaKnown RBP6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 LFNGQ8NES3 379 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 OR2Z1Q8NG97 314 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 RNASE11Q8TAA1 199 aaKnown RBP6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 FAM110DQ8TAY7 271 aaPredicted RBP6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 LRRC29Q8WV35 223 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 GNPNAT1Q96EK6 184 aaPredicted RBP6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 COQ2Q96H96 371 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 SMDT1Q9H4I9 107 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 GCM1Q9NP62 436 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 UFSP2Q9NUQ7 469 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 PPP1R3CQ9UQK1 317 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 LAMP3Q9UQV4 416 aa6.06□□□□□ -1.44
HERPUD1-209ENST00000564678 TRAV39A0A0B4J263 110 aa6.05□□□□□ -1.44
HERPUD1-209ENST00000564678 CGB1A6NKQ9 187 aa6.05□□□□□ -1.44
HERPUD1-209ENST00000564678 M0R1B8 84 aa6.05□□□□□ -1.44
HERPUD1-209ENST00000564678 TOR1AO14656 332 aa6.05□□□□□ -1.44
HERPUD1-209ENST00000564678 PRRG2O14669 202 aa6.05□□□□□ -1.44
HERPUD1-209ENST00000564678 SPINT2O43291 252 aa6.05□□□□□ -1.44
HERPUD1-209ENST00000564678 SNAPINO95295 136 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms