RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 KIAA1324LA8MWY0 1029 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-249ENST00000564606 AQP7O14520 342 aa6.44□□□□□ -1.38
ATXN3-249ENST00000564606 TIMM8AO60220 97 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-249ENST00000564606 CLN5O75503 358 aa6.44□□□□□ -1.38
ATXN3-249ENST00000564606 HRASP01112 189 aa6.44□□□□□ -1.38
ATXN3-249ENST00000564606 IGHG3P01860 377 aa6.44□□□□□ -1.38
ATXN3-249ENST00000564606 CDC34P49427 236 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-249ENST00000564606 IDH3GP51553 393 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-249ENST00000564606 RAB4BP61018 213 aa6.44□□□□□ -1.38
ATXN3-249ENST00000564606 RUNX1Q01196 453 aa6.44□□□□□ -1.38
ATXN3-249ENST00000564606 ADIRFQ15847 76 aa6.44□□□□□ -1.38
ATXN3-249ENST00000564606 VWC2Q2TAL6 325 aa6.44□□□□□ -1.38
ATXN3-249ENST00000564606 PDLIM3Q53GG5 364 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-249ENST00000564606 FFAR4Q5NUL3 377 aa6.44□□□□□ -1.38
ATXN3-249ENST00000564606 OR8G2PQ6IF36 304 aa6.44□□□□□ -1.38
ATXN3-249ENST00000564606 LINC00696Q6ZRV3 163 aa6.44□□□□□ -1.38
ATXN3-249ENST00000564606 BEND4Q6ZU67 534 aa6.44□□□□□ -1.38
ATXN3-249ENST00000564606 MRPL41Q8IXM3 137 aaKnown RBP6.44□□□□□ -1.38
ATXN3-249ENST00000564606 TMEM183AQ8IXX5 376 aa6.44□□□□□ -1.38
ATXN3-249ENST00000564606 PRR18Q8N4B5 295 aa6.44□□□□□ -1.38
ATXN3-249ENST00000564606 RNASEH2CQ8TDP1 164 aaKnown RBP6.44□□□□□ -1.38
ATXN3-249ENST00000564606 Q8WTZ3 238 aa6.44□□□□□ -1.38
ATXN3-249ENST00000564606 CA5BP1Q8WTZ4 195 aa6.44□□□□□ -1.38
ATXN3-249ENST00000564606 TMEM18Q96B42 140 aa6.44□□□□□ -1.38
ATXN3-249ENST00000564606 RPUSD4Q96CM3 377 aaKnown RBP6.44□□□□□ -1.38
ATXN3-249ENST00000564606 NOL4LQ96MY1 436 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-249ENST00000564606 UHRF2Q96PU4 802 aa6.44□□□□□ -1.38
ATXN3-249ENST00000564606 OR4C12Q96R67 309 aa6.44□□□□□ -1.38
ATXN3-249ENST00000564606 DIRC2Q96SL1 478 aa6.44□□□□□ -1.38
ATXN3-249ENST00000564606 CDX2Q99626 313 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-249ENST00000564606 OR2D2Q9H210 308 aa6.44□□□□□ -1.38
ATXN3-249ENST00000564606 SMOC1Q9H4F8 434 aa6.44□□□□□ -1.38
ATXN3-249ENST00000564606 ZDHHC11Q9H8X9 412 aa6.44□□□□□ -1.38
ATXN3-249ENST00000564606 FKBP11Q9NYL4 201 aa6.44□□□□□ -1.38
ATXN3-249ENST00000564606 BRWD1Q9NSI6 2320 aa6.44□□□□□ -1.38
ATXN3-249ENST00000564606 VSTM5A8MXK1 200 aa6.43□□□□□ -1.38
ATXN3-249ENST00000564606 PATE3B3GLJ2 98 aa6.43□□□□□ -1.38
ATXN3-249ENST00000564606 C9orf172C9J069 976 aa6.43□□□□□ -1.38
ATXN3-249ENST00000564606 CDIPTO14735 213 aa6.43□□□□□ -1.38
ATXN3-249ENST00000564606 MGST3O14880 152 aa6.43□□□□□ -1.38
ATXN3-249ENST00000564606 YPEL1O60688 119 aa6.43□□□□□ -1.38
ATXN3-249ENST00000564606 ZNF205O95201 554 aa6.43□□□□□ -1.38
ATXN3-249ENST00000564606 TMEM50AO95807 157 aa6.43□□□□□ -1.38
ATXN3-249ENST00000564606 IL18BPO95998 194 aa6.43□□□□□ -1.38
ATXN3-249ENST00000564606 CXorf1O96002 111 aa6.43□□□□□ -1.38
ATXN3-249ENST00000564606 IGKV1-5P01602 117 aa6.43□□□□□ -1.38
ATXN3-249ENST00000564606 HBZP02008 142 aa6.43□□□□□ -1.38
ATXN3-249ENST00000564606 CCL2P13500 99 aa6.43□□□□□ -1.38
ATXN3-249ENST00000564606 DAOP14920 347 aa6.43□□□□□ -1.38
ATXN3-249ENST00000564606 HIST1H1BP16401 226 aaKnown RBP6.43□□□□□ -1.38
ATXN3-249ENST00000564606 TNFSF4P23510 183 aa6.43□□□□□ -1.38
ATXN3-249ENST00000564606 CFHR2P36980 270 aa6.43□□□□□ -1.38
ATXN3-249ENST00000564606 OPRK1P41145 380 aa6.43□□□□□ -1.38
ATXN3-249ENST00000564606 WNT5AP41221 380 aa6.43□□□□□ -1.38
ATXN3-249ENST00000564606 GALR1P47211 349 aa6.43□□□□□ -1.38
ATXN3-249ENST00000564606 GPR12P47775 334 aa6.43□□□□□ -1.38
ATXN3-249ENST00000564606 OR3A1P47881 315 aa6.43□□□□□ -1.38
ATXN3-249ENST00000564606 ASCL1P50553 236 aa6.43□□□□□ -1.38
ATXN3-249ENST00000564606 SSTP61278 116 aa6.43□□□□□ -1.38
ATXN3-249ENST00000564606 CCL20P78556 96 aa6.43□□□□□ -1.38
ATXN3-249ENST00000564606 ZNF585BQ52M93 769 aa6.43□□□□□ -1.38
ATXN3-249ENST00000564606 LCE2AQ5TA79 106 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-249ENST00000564606 MBNL2Q5VZF2 373 aaKnown RBP6.43□□□□□ -1.38
ATXN3-249ENST00000564606 FAM90A2PQ658T7 463 aa6.43□□□□□ -1.38
ATXN3-249ENST00000564606 ACP7Q6ZNF0 438 aa6.43□□□□□ -1.38
ATXN3-249ENST00000564606 SLC16A13Q7RTY0 426 aa6.43□□□□□ -1.38
ATXN3-249ENST00000564606 DTX1Q86Y01 620 aa6.43□□□□□ -1.38
ATXN3-249ENST00000564606 GCSAMQ8N6F7 178 aa6.43□□□□□ -1.38
ATXN3-249ENST00000564606 OR2T10Q8NGZ9 312 aa6.43□□□□□ -1.38
ATXN3-249ENST00000564606 OR4S2Q8NH73 311 aa6.43□□□□□ -1.38
ATXN3-249ENST00000564606 SLC25A40Q8TBP6 338 aa6.43□□□□□ -1.38
ATXN3-249ENST00000564606 S100PBPQ96BU1 408 aa6.43□□□□□ -1.38
ATXN3-249ENST00000564606 SNX22Q96L94 193 aa6.43□□□□□ -1.38
ATXN3-249ENST00000564606 YPEL2Q96QA6 119 aa6.43□□□□□ -1.38
ATXN3-249ENST00000564606 RNF2Q99496 336 aa6.43□□□□□ -1.38
ATXN3-249ENST00000564606 PYGO2Q9BRQ0 406 aa6.43□□□□□ -1.38
ATXN3-249ENST00000564606 OR2J1Q9GZK6 312 aa6.43□□□□□ -1.38
ATXN3-249ENST00000564606 FSCN3Q9NQT6 498 aa6.43□□□□□ -1.38
ATXN3-249ENST00000564606 UFSP2Q9NUQ7 469 aa6.43□□□□□ -1.38
ATXN3-249ENST00000564606 OR1A1Q9P1Q5 309 aa6.43□□□□□ -1.38
ATXN3-249ENST00000564606 LY96Q9Y6Y9 160 aa6.43□□□□□ -1.38
ATXN3-249ENST00000564606 TRGV8A0A0C4DH27 118 aa6.42□□□□□ -1.38
ATXN3-249ENST00000564606 MDFIC2A0A1B0GVS7 189 aa6.42□□□□□ -1.38
ATXN3-249ENST00000564606 PRR33A8MZF0 331 aa6.42□□□□□ -1.38
ATXN3-249ENST00000564606 H3BP45 60 aa6.42□□□□□ -1.38
ATXN3-249ENST00000564606 TMPRSS2O15393 492 aa6.42□□□□□ -1.38
ATXN3-249ENST00000564606 HIST1H2BKO60814 126 aa6.42□□□□□ -1.38
ATXN3-249ENST00000564606 KRASP01116 189 aa6.42□□□□□ -1.38
ATXN3-249ENST00000564606 TRGC2P03986 189 aa6.42□□□□□ -1.38
ATXN3-249ENST00000564606 TYMSP04818 313 aa6.42□□□□□ -1.38
ATXN3-249ENST00000564606 HIST1H2BJP06899 126 aa6.42□□□□□ -1.38
ATXN3-249ENST00000564606 GRPP07492 148 aa6.42□□□□□ -1.38
ATXN3-249ENST00000564606 HIST1H2BOP23527 126 aa6.42□□□□□ -1.38
ATXN3-249ENST00000564606 CD1BP29016 333 aa6.42□□□□□ -1.38
ATXN3-249ENST00000564606 HIST1H2BBP33778 126 aa6.42□□□□□ -1.38
ATXN3-249ENST00000564606 THBS3P49746 956 aa6.42□□□□□ -1.38
ATXN3-249ENST00000564606 ELLP55199 621 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-249ENST00000564606 HIST1H2BDP58876 126 aa6.42□□□□□ -1.38
ATXN3-249ENST00000564606 HIST1H2BCP62807 126 aa6.42□□□□□ -1.38
ATXN3-249ENST00000564606 HIST2H2BEQ16778 126 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms