RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 OR4M2Q8NGB6 313 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 PHF10Q8WUB8 498 aaKnown RBP2.61□□□□□ -1.99
LINC00560-201ENST00000564593 TMEM234Q8WY98 164 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 ING5Q8WYH8 240 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 AP3S1Q92572 193 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 PPCDCQ96CD2 204 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 ZHX1-C8orf76Q96EF9 292 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 CEP19Q96LK0 163 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 PITX2Q99697 317 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 DOHHQ9BU89 302 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 OR51B5Q9H339 312 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 VAPAQ9P0L0 249 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 ERGIC3Q9Y282 383 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 MYOFQ9NZM1 2061 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 SPRR5A0A1B0GTR4 108 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 A8MUU9 505 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 EFCAB9A8MZ26 197 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 K7EM74 188 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 GMDSO60547 372 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 NDUFS6O75380 124 aaKnown RBP2.61□□□□□ -1.99
LINC00560-201ENST00000564593 PSIP1O75475 530 aaKnown RBP2.61□□□□□ -1.99
LINC00560-201ENST00000564593 SCO1O75880 301 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 PDYNP01213 254 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 SLC35G6P0C7Q6 338 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 PIPP12273 146 aaPredicted RBP2.61□□□□□ -1.99
LINC00560-201ENST00000564593 ZNF14P17017 642 aaPredicted RBP2.61□□□□□ -1.99
LINC00560-201ENST00000564593 MYL12AP19105 171 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 CFL1P23528 166 aaKnown RBP2.61□□□□□ -1.99
LINC00560-201ENST00000564593 ELK4P28324 431 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 KDELR2P33947 212 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 UGT2B10P36537 528 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 CMC4P56277 68 aaPredicted RBP2.61□□□□□ -1.99
LINC00560-201ENST00000564593 KRTAP10-1P60331 282 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 SLC35A2P78381 396 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 ST3GAL4Q11206 333 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 ATP6V1FQ16864 119 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 ZNF404Q494X3 552 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 SYT6Q5T7P8 510 aaPredicted RBP2.61□□□□□ -1.99
LINC00560-201ENST00000564593 CST9Q5W186 159 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 THOC7Q6I9Y2 204 aaKnown RBP2.61□□□□□ -1.99
LINC00560-201ENST00000564593 FAHD1Q6P587 224 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 CASP12Q6UXS9 341 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 BBS7Q8IWZ6 715 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 CYP4Z2PQ8N1L4 340 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 STX19Q8N4C7 294 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 SPANXA2-OT1Q8N9U9 137 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 CDC26Q8NHZ8 85 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 MCFD2Q8NI22 146 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 RAD51AP1Q96B01 352 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 WDR34Q96EX3 536 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 TEX37Q96LM6 180 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 AIF1LQ9BQI0 150 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 MARVELD1Q9BSK0 173 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 COPS4Q9BT78 406 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 CCDC32Q9BV29 185 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 SCRT1Q9BWW7 348 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 ULBP2Q9BZM5 246 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 DUSP21Q9H596 190 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 TPT1P8Q9HAU6 139 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 CALML5Q9NZT1 146 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 ZNF229Q9UJW7 825 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 KLF12Q9Y4X4 402 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 OR51B4Q9Y5P0 310 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 HEATR5BQ9P2D3 2071 aa2.61□□□□□ -1.99
LINC00560-201ENST00000564593 GOLGB1Q14789 3259 aaKnown RBP2.6□□□□□ -1.99
LINC00560-201ENST00000564593 TRPM6Q9BX84 2022 aa2.6□□□□□ -1.99
LINC00560-201ENST00000564593 CENPBD1B2RD01 187 aa2.6□□□□□ -1.99
LINC00560-201ENST00000564593 LGALS9O00182 355 aa2.6□□□□□ -1.99
LINC00560-201ENST00000564593 UPK1AO00322 258 aa2.6□□□□□ -1.99
LINC00560-201ENST00000564593 FAAHO00519 579 aa2.6□□□□□ -1.99
LINC00560-201ENST00000564593 TRAPPC6AO75865 159 aa2.6□□□□□ -1.99
LINC00560-201ENST00000564593 SULT1C4O75897 302 aa2.6□□□□□ -1.99
LINC00560-201ENST00000564593 FADS2O95864 444 aaKnown RBP2.6□□□□□ -1.99
LINC00560-201ENST00000564593 NQO2P16083 231 aa2.6□□□□□ -1.99
LINC00560-201ENST00000564593 CD36P16671 472 aa2.6□□□□□ -1.99
LINC00560-201ENST00000564593 NELFEP18615 380 aaKnown RBP2.6□□□□□ -1.99
LINC00560-201ENST00000564593 PSMA1P25786 263 aaKnown RBP2.6□□□□□ -1.99
LINC00560-201ENST00000564593 CRATP43155 626 aa2.6□□□□□ -1.99
LINC00560-201ENST00000564593 HCCSP53701 268 aa2.6□□□□□ -1.99
LINC00560-201ENST00000564593 TBPL1P62380 186 aa2.6□□□□□ -1.99
LINC00560-201ENST00000564593 SELENOWP63302 87 aa2.6□□□□□ -1.99
LINC00560-201ENST00000564593 PRKCDQ05655 676 aa2.6□□□□□ -1.99
LINC00560-201ENST00000564593 MAD2L1BPQ15013 274 aaPredicted RBP2.6□□□□□ -1.99
LINC00560-201ENST00000564593 ANGPT1Q15389 498 aa2.6□□□□□ -1.99
LINC00560-201ENST00000564593 LUZP6Q538Z0 58 aa2.6□□□□□ -1.99
LINC00560-201ENST00000564593 DNLZQ5SXM8 178 aa2.6□□□□□ -1.99
LINC00560-201ENST00000564593 C6orf183Q5T699 404 aa2.6□□□□□ -1.99
LINC00560-201ENST00000564593 HENMT1Q5T8I9 393 aaKnown RBP2.6□□□□□ -1.99
LINC00560-201ENST00000564593 XAF1Q6GPH4 301 aa2.6□□□□□ -1.99
LINC00560-201ENST00000564593 AGTRAPQ6RW13 159 aa2.6□□□□□ -1.99
LINC00560-201ENST00000564593 SCIMPQ6UWF3 145 aa2.6□□□□□ -1.99
LINC00560-201ENST00000564593 PLEKHG7Q6ZR37 379 aa2.6□□□□□ -1.99
LINC00560-201ENST00000564593 AHSA2Q719I0 299 aa2.6□□□□□ -1.99
LINC00560-201ENST00000564593 AKAP14Q86UN6 197 aa2.6□□□□□ -1.99
LINC00560-201ENST00000564593 TRAPPC5Q8IUR0 188 aa2.6□□□□□ -1.99
LINC00560-201ENST00000564593 SLC7A5P1Q8MH63 180 aa2.6□□□□□ -1.99
LINC00560-201ENST00000564593 KRTCAP2Q8N6L1 136 aa2.6□□□□□ -1.99
LINC00560-201ENST00000564593 ST20-AS1Q8NBB2 130 aa2.6□□□□□ -1.99
LINC00560-201ENST00000564593 FAM131CQ96AQ9 280 aa2.6□□□□□ -1.99
LINC00560-201ENST00000564593 TAMM41Q96BW9 452 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms