RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 TMEM200BQ69YZ2 307 aa12.83□□□□□ -0.36
COMMD4-210ENST00000564587 SLC51BQ86UW2 128 aa12.83□□□□□ -0.36
COMMD4-210ENST00000564587 C8orf31Q8N9H6 132 aa12.83□□□□□ -0.36
COMMD4-210ENST00000564587 OR8H1Q8NGG4 311 aa12.83□□□□□ -0.36
COMMD4-210ENST00000564587 OR4D5Q8NGN0 318 aa12.83□□□□□ -0.36
COMMD4-210ENST00000564587 TCTEX1D2Q8WW35 142 aa12.83□□□□□ -0.36
COMMD4-210ENST00000564587 AQP10Q96PS8 301 aa12.83□□□□□ -0.36
COMMD4-210ENST00000564587 NSG2Q9Y328 171 aa12.83□□□□□ -0.36
COMMD4-210ENST00000564587 PRELID3BQ9Y3B1 194 aa12.83□□□□□ -0.36
COMMD4-210ENST00000564587 USP9XQ93008 2570 aaPredicted RBP12.83□□□□□ -0.36
COMMD4-210ENST00000564587 LYNX1G3V0Z9 82 aa12.82□□□□□ -0.36
COMMD4-210ENST00000564587 H0YIZ8 118 aa12.82□□□□□ -0.36
COMMD4-210ENST00000564587 RBFOX2O43251 390 aaKnown RBP eCLIP12.82□□□□□ -0.36
COMMD4-210ENST00000564587 PPIHO43447 177 aaKnown RBP12.82□□□□□ -0.36
COMMD4-210ENST00000564587 RBP4P02753 201 aa12.82□□□□□ -0.36
COMMD4-210ENST00000564587 LYNX1P0DP58 116 aa12.82□□□□□ -0.36
COMMD4-210ENST00000564587 MMP9P14780 707 aa12.82□□□□□ -0.36
COMMD4-210ENST00000564587 OMGP23515 440 aa12.82□□□□□ -0.36
COMMD4-210ENST00000564587 NFYBP25208 207 aa12.82□□□□□ -0.36
COMMD4-210ENST00000564587 LPAR6P43657 344 aa12.82□□□□□ -0.36
COMMD4-210ENST00000564587 NKX2-1P43699 371 aaPredicted RBP12.82□□□□□ -0.36
COMMD4-210ENST00000564587 EFNA4P52798 201 aa12.82□□□□□ -0.36
COMMD4-210ENST00000564587 ZNF585BQ52M93 769 aa12.82□□□□□ -0.36
COMMD4-210ENST00000564587 TEX261Q6UWH6 196 aa12.82□□□□□ -0.36
COMMD4-210ENST00000564587 ZNF439Q8NDP4 499 aa12.82□□□□□ -0.36
COMMD4-210ENST00000564587 OR1S1Q8NH92 325 aa12.82□□□□□ -0.36
COMMD4-210ENST00000564587 S1PR3Q99500 378 aa12.82□□□□□ -0.36
COMMD4-210ENST00000564587 IFI27L2Q9H2X8 130 aa12.82□□□□□ -0.36
COMMD4-210ENST00000564587 HEXA-AS1Q9H8Q6 139 aa12.82□□□□□ -0.36
COMMD4-210ENST00000564587 POMT1Q9Y6A1 747 aa12.82□□□□□ -0.36
COMMD4-210ENST00000564587 U3KQ87 197 aa12.82□□□□□ -0.36
COMMD4-210ENST00000564587 hCG_1809904A0A1W2PP81 198 aa12.81□□□□□ -0.36
COMMD4-210ENST00000564587 A0A1W2PPE2 198 aa12.81□□□□□ -0.36
COMMD4-210ENST00000564587 A0A1W2PPR1 153 aa12.81□□□□□ -0.36
COMMD4-210ENST00000564587 A0A1W2PR64 198 aa12.81□□□□□ -0.36
COMMD4-210ENST00000564587 A0A1W2PRV1 198 aa12.81□□□□□ -0.36
COMMD4-210ENST00000564587 MEX3AA1L020 520 aaKnown RBP12.81□□□□□ -0.36
COMMD4-210ENST00000564587 RNF222A6NCQ9 220 aa12.81□□□□□ -0.36
COMMD4-210ENST00000564587 K7EPK0 472 aa12.81□□□□□ -0.36
COMMD4-210ENST00000564587 BCL2L11O43521 198 aa12.81□□□□□ -0.36
COMMD4-210ENST00000564587 SCGB1D2O95969 90 aa12.81□□□□□ -0.36
COMMD4-210ENST00000564587 MBPP02686 304 aaPredicted RBP12.81□□□□□ -0.36
COMMD4-210ENST00000564587 DUTP33316 252 aaKnown RBP12.81□□□□□ -0.36
COMMD4-210ENST00000564587 THBS3P49746 956 aa12.81□□□□□ -0.36
COMMD4-210ENST00000564587 ARHGDIBP52566 201 aa12.81□□□□□ -0.36
COMMD4-210ENST00000564587 AKR1C2P52895 323 aa12.81□□□□□ -0.36
COMMD4-210ENST00000564587 UBA52P62987 128 aaKnown RBP12.81□□□□□ -0.36
COMMD4-210ENST00000564587 ZNF273Q14593 569 aa12.81□□□□□ -0.36
COMMD4-210ENST00000564587 CT45A1Q5HYN5 189 aa12.81□□□□□ -0.36
COMMD4-210ENST00000564587 SLC25A48Q6ZT89 311 aaKnown RBP12.81□□□□□ -0.36
COMMD4-210ENST00000564587 SPAG16Q8N0X2 631 aa12.81□□□□□ -0.36
COMMD4-210ENST00000564587 FAM71E2Q8N5Q1 922 aa12.81□□□□□ -0.36
COMMD4-210ENST00000564587 CT45A3Q8NHU0 189 aa12.81□□□□□ -0.36
COMMD4-210ENST00000564587 C8orf46Q8TAG6 207 aa12.81□□□□□ -0.36
COMMD4-210ENST00000564587 GPHA2Q96T91 129 aa12.81□□□□□ -0.36
COMMD4-210ENST00000564587 COA4Q9NYJ1 87 aa12.81□□□□□ -0.36
COMMD4-210ENST00000564587 LSM5Q9Y4Y9 91 aaKnown RBP12.81□□□□□ -0.36
COMMD4-210ENST00000564587 MMP24Q9Y5R2 645 aa12.81□□□□□ -0.36
COMMD4-210ENST00000564587 TEX15Q9BXT5 2789 aa12.8□□□□□ -0.36
COMMD4-210ENST00000564587 M0R1X1 148 aa12.8□□□□□ -0.36
COMMD4-210ENST00000564587 TAAR5O14804 337 aa12.8□□□□□ -0.36
COMMD4-210ENST00000564587 P2RY1P47900 373 aa12.8□□□□□ -0.36
COMMD4-210ENST00000564587 AP2S1P53680 142 aaPredicted RBP12.8□□□□□ -0.36
COMMD4-210ENST00000564587 TAGLNQ01995 201 aaKnown RBP12.8□□□□□ -0.36
COMMD4-210ENST00000564587 PRAMEF5Q5TYX0 476 aa12.8□□□□□ -0.36
COMMD4-210ENST00000564587 GPR157Q5UAW9 335 aa12.8□□□□□ -0.36
COMMD4-210ENST00000564587 ZNF841Q6ZN19 808 aa12.8□□□□□ -0.36
COMMD4-210ENST00000564587 LINC00311Q8N616 119 aa12.8□□□□□ -0.36
COMMD4-210ENST00000564587 ZNF680Q8NEM1 530 aa12.8□□□□□ -0.36
COMMD4-210ENST00000564587 GPR146Q96CH1 333 aa12.8□□□□□ -0.36
COMMD4-210ENST00000564587 C5orf30Q96GV9 206 aa12.8□□□□□ -0.36
COMMD4-210ENST00000564587 ARPC5LQ9BPX5 153 aa12.8□□□□□ -0.36
COMMD4-210ENST00000564587 PATZ1Q9HBE1 687 aaKnown RBP12.8□□□□□ -0.36
COMMD4-210ENST00000564587 OR5AC2Q9NZP5 309 aa12.8□□□□□ -0.36
COMMD4-210ENST00000564587 CACFD1Q9UGQ2 172 aa12.8□□□□□ -0.36
COMMD4-210ENST00000564587 A0A087X0M5 115 aa12.79□□□□□ -0.36
COMMD4-210ENST00000564587 A0A1B0GX30 115 aa12.79□□□□□ -0.36
COMMD4-210ENST00000564587 C17orf98A8MV24 154 aa12.79□□□□□ -0.36
COMMD4-210ENST00000564587 FAM90A26D6RGX4 464 aa12.79□□□□□ -0.36
COMMD4-210ENST00000564587 OVOL3O00110 214 aa12.79□□□□□ -0.36
COMMD4-210ENST00000564587 WRBO00258 174 aa12.79□□□□□ -0.36
COMMD4-210ENST00000564587 PITX3O75364 302 aa12.79□□□□□ -0.36
COMMD4-210ENST00000564587 FCN3O75636 299 aa12.79□□□□□ -0.36
COMMD4-210ENST00000564587 HPRT1P00492 218 aa12.79□□□□□ -0.36
COMMD4-210ENST00000564587 GPR6P46095 362 aaPredicted RBP12.79□□□□□ -0.36
COMMD4-210ENST00000564587 ZNF134P52741 427 aa12.79□□□□□ -0.36
COMMD4-210ENST00000564587 DLX6P56179 175 aa12.79□□□□□ -0.36
COMMD4-210ENST00000564587 RPL30P62888 115 aaKnown RBP12.79□□□□□ -0.36
COMMD4-210ENST00000564587 EIF5AP63241 154 aaKnown RBP12.79□□□□□ -0.36
COMMD4-210ENST00000564587 ID3Q02535 119 aa12.79□□□□□ -0.36
COMMD4-210ENST00000564587 AVPI1Q5T686 147 aa12.79□□□□□ -0.36
COMMD4-210ENST00000564587 FAM53AQ6NSI3 398 aaPredicted RBP12.79□□□□□ -0.36
COMMD4-210ENST00000564587 FAM71F2Q6NXP2 309 aa12.79□□□□□ -0.36
COMMD4-210ENST00000564587 BTNL3Q6UXE8 466 aa12.79□□□□□ -0.36
COMMD4-210ENST00000564587 FGFRL1Q8N441 504 aa12.79□□□□□ -0.36
COMMD4-210ENST00000564587 ZNF596Q8TC21 504 aa12.79□□□□□ -0.36
COMMD4-210ENST00000564587 TNFRSF14Q92956 283 aa12.79□□□□□ -0.36
COMMD4-210ENST00000564587 UBQLN2Q9UHD9 624 aa12.79□□□□□ -0.36
COMMD4-210ENST00000564587 FAM90A9PA6NNJ1 464 aa12.78□□□□□ -0.36
COMMD4-210ENST00000564587 IGKV1-39P01597 117 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms