RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 GINS4Q9BRT9 223 aa13.72□□□□□ -0.21
USB1-209ENST00000564387 LIN7CQ9NUP9 197 aaKnown RBP13.72□□□□□ -0.21
USB1-209ENST00000564387 SCOCQ9UIL1 159 aa13.72□□□□□ -0.21
USB1-209ENST00000564387 RNF150Q9ULK6 438 aa13.72□□□□□ -0.21
USB1-209ENST00000564387 VWFP04275 2813 aa13.72□□□□□ -0.21
USB1-209ENST00000564387 HPGDSO60760 199 aa13.71□□□□□ -0.21
USB1-209ENST00000564387 TPPPO94811 219 aa13.71□□□□□ -0.21
USB1-209ENST00000564387 NAT1P18440 290 aa13.71□□□□□ -0.21
USB1-209ENST00000564387 VDAC2P45880 294 aaPredicted RBP13.71□□□□□ -0.21
USB1-209ENST00000564387 GPR12P47775 334 aa13.71□□□□□ -0.21
USB1-209ENST00000564387 TMEM95Q3KNT9 176 aa13.71□□□□□ -0.21
USB1-209ENST00000564387 NPBQ8NG41 125 aa13.71□□□□□ -0.21
USB1-209ENST00000564387 DYNC2LI1Q8TCX1 351 aa13.71□□□□□ -0.21
USB1-209ENST00000564387 SNAPC3Q92966 411 aa13.71□□□□□ -0.21
USB1-209ENST00000564387 RBMXL1Q96E39 390 aaKnown RBP13.71□□□□□ -0.21
USB1-209ENST00000564387 C5orf30Q96GV9 206 aa13.71□□□□□ -0.21
USB1-209ENST00000564387 RITA1Q96K30 269 aa13.71□□□□□ -0.21
USB1-209ENST00000564387 RNF5Q99942 180 aa13.71□□□□□ -0.21
USB1-209ENST00000564387 SDHAF2Q9NX18 166 aa13.71□□□□□ -0.21
USB1-209ENST00000564387 OR2W1Q9Y3N9 320 aa13.71□□□□□ -0.21
USB1-209ENST00000564387 TRRAPQ9Y4A5 3859 aa13.7□□□□□ -0.22
USB1-209ENST00000564387 FBN3Q75N90 2809 aa13.7□□□□□ -0.22
USB1-209ENST00000564387 SH2D7A6NKC9 451 aaPredicted RBP13.7□□□□□ -0.22
USB1-209ENST00000564387 NDUFA3O95167 84 aa13.7□□□□□ -0.22
USB1-209ENST00000564387 ACTBP60709 375 aa13.7□□□□□ -0.22
USB1-209ENST00000564387 FAM131AQ6UXB0 335 aa13.7□□□□□ -0.22
USB1-209ENST00000564387 ZNF383Q8NA42 475 aa13.7□□□□□ -0.22
USB1-209ENST00000564387 ISOC1Q96CN7 298 aa13.7□□□□□ -0.22
USB1-209ENST00000564387 OR2D2Q9H210 308 aa13.7□□□□□ -0.22
USB1-209ENST00000564387 ADAM30Q9UKF2 790 aa13.7□□□□□ -0.22
USB1-209ENST00000564387 CEPT1Q9Y6K0 416 aa13.7□□□□□ -0.22
USB1-209ENST00000564387 SMIM31A0A1B0GVY4 71 aa13.69□□□□□ -0.22
USB1-209ENST00000564387 NCBP2LA6PVI3 153 aaKnown RBP13.69□□□□□ -0.22
USB1-209ENST00000564387 H3BMQ9 156 aa13.69□□□□□ -0.22
USB1-209ENST00000564387 RBBP9O75884 186 aa13.69□□□□□ -0.22
USB1-209ENST00000564387 VSIG10L2P0DP72 767 aa13.69□□□□□ -0.22
USB1-209ENST00000564387 OR5AP2Q8NGF4 316 aa13.69□□□□□ -0.22
USB1-209ENST00000564387 GPX8Q8TED1 209 aa13.69□□□□□ -0.22
USB1-209ENST00000564387 CCDC59Q9P031 241 aaKnown RBP13.69□□□□□ -0.22
USB1-209ENST00000564387 WASHC3Q9Y3C0 194 aa13.69□□□□□ -0.22
USB1-209ENST00000564387 IGLV2-14P01704 120 aa13.68□□□□□ -0.22
USB1-209ENST00000564387 NFYAP23511 347 aaPredicted RBP13.68□□□□□ -0.22
USB1-209ENST00000564387 PRSS3P35030 304 aa13.68□□□□□ -0.22
USB1-209ENST00000564387 SOX6P35712 828 aa13.68□□□□□ -0.22
USB1-209ENST00000564387 LINC00205P59089 165 aa13.68□□□□□ -0.22
USB1-209ENST00000564387 GLDNQ6ZMI3 551 aaPredicted RBP13.68□□□□□ -0.22
USB1-209ENST00000564387 DRAXINQ8NBI3 349 aaPredicted RBP13.68□□□□□ -0.22
USB1-209ENST00000564387 RBM38Q9H0Z9 239 aaKnown RBP13.68□□□□□ -0.22
USB1-209ENST00000564387 MIXL1Q9H2W2 232 aa13.68□□□□□ -0.22
USB1-209ENST00000564387 SCPEP1Q9HB40 452 aa13.68□□□□□ -0.22
USB1-209ENST00000564387 ZNF580Q9UK33 172 aa13.68□□□□□ -0.22
USB1-209ENST00000564387 IGKV1D-13A0A0B4J2D9 117 aa13.67□□□□□ -0.22
USB1-209ENST00000564387 M0R1X1 148 aa13.67□□□□□ -0.22
USB1-209ENST00000564387 SULT1C2O00338 296 aa13.67□□□□□ -0.22
USB1-209ENST00000564387 NBR2O15453 112 aa13.67□□□□□ -0.22
USB1-209ENST00000564387 SLC22A5O76082 557 aa13.67□□□□□ -0.22
USB1-209ENST00000564387 IGKV1-13P0DP09 117 aa13.67□□□□□ -0.22
USB1-209ENST00000564387 CNTFRP26992 372 aa13.67□□□□□ -0.22
USB1-209ENST00000564387 LUMP51884 338 aaPredicted RBP13.67□□□□□ -0.22
USB1-209ENST00000564387 TAGLNQ01995 201 aaKnown RBP13.67□□□□□ -0.22
USB1-209ENST00000564387 MMDQ15546 238 aa13.67□□□□□ -0.22
USB1-209ENST00000564387 PDPNQ86YL7 162 aa13.67□□□□□ -0.22
USB1-209ENST00000564387 ZNF645Q8N7E2 425 aa13.67□□□□□ -0.22
USB1-209ENST00000564387 GIMAP1Q8WWP7 306 aa13.67□□□□□ -0.22
USB1-209ENST00000564387 DDB2Q92466 427 aa13.67□□□□□ -0.22
USB1-209ENST00000564387 NECAP2Q9NVZ3 263 aa13.67□□□□□ -0.22
USB1-209ENST00000564387 LINC01548A6NM66 108 aa13.66□□□□□ -0.22
USB1-209ENST00000564387 HLA-DRB1P01911 266 aa13.66□□□□□ -0.22
USB1-209ENST00000564387 IGKV1-16P04430 117 aa13.66□□□□□ -0.22
USB1-209ENST00000564387 OR5H8P0DN80 308 aa13.66□□□□□ -0.22
USB1-209ENST00000564387 DUTP33316 252 aaKnown RBP13.66□□□□□ -0.22
USB1-209ENST00000564387 ARPC4P59998 168 aa13.66□□□□□ -0.22
USB1-209ENST00000564387 CD83Q01151 205 aa13.66□□□□□ -0.22
USB1-209ENST00000564387 EIF4EBP1Q13541 118 aaPredicted RBP13.66□□□□□ -0.22
USB1-209ENST00000564387 MSMO1Q15800 293 aa13.66□□□□□ -0.22
USB1-209ENST00000564387 C5orf64Q2M2E5 130 aa13.66□□□□□ -0.22
USB1-209ENST00000564387 ARSJQ5FYB0 599 aaPredicted RBP13.66□□□□□ -0.22
USB1-209ENST00000564387 TCTEX1D4Q5JR98 221 aa13.66□□□□□ -0.22
USB1-209ENST00000564387 C9orf152Q5JTZ5 239 aa13.66□□□□□ -0.22
USB1-209ENST00000564387 ZNF660Q6AZW8 331 aaPredicted RBP13.66□□□□□ -0.22
USB1-209ENST00000564387 DHRS11Q6UWP2 260 aa13.66□□□□□ -0.22
USB1-209ENST00000564387 OVCH2Q7RTZ1 564 aa13.66□□□□□ -0.22
USB1-209ENST00000564387 SLC35E3Q7Z769 313 aa13.66□□□□□ -0.22
USB1-209ENST00000564387 LYSMD2Q8IV50 215 aa13.66□□□□□ -0.22
USB1-209ENST00000564387 OR5AU1Q8NGC0 362 aa13.66□□□□□ -0.22
USB1-209ENST00000564387 ADTRPQ96IZ2 230 aa13.66□□□□□ -0.22
USB1-209ENST00000564387 RASL11BQ9BPW5 248 aa13.66□□□□□ -0.22
USB1-209ENST00000564387 SLIRPQ9GZT3 109 aaKnown RBP13.66□□□□□ -0.22
USB1-209ENST00000564387 MEIS3P1A6NDR6 274 aa13.65□□□□□ -0.22
USB1-209ENST00000564387 CTDSP2O14595 271 aa13.65□□□□□ -0.22
USB1-209ENST00000564387 KCNAB3O43448 404 aa13.65□□□□□ -0.22
USB1-209ENST00000564387 PEX14O75381 377 aa13.65□□□□□ -0.22
USB1-209ENST00000564387 FBXO24O75426 580 aa13.65□□□□□ -0.22
USB1-209ENST00000564387 IGF1P05019 195 aa13.65□□□□□ -0.22
USB1-209ENST00000564387 CD28P10747 220 aa13.65□□□□□ -0.22
USB1-209ENST00000564387 THBS3P49746 956 aa13.65□□□□□ -0.22
USB1-209ENST00000564387 CDK10Q15131 360 aa13.65□□□□□ -0.22
USB1-209ENST00000564387 CENPVQ7Z7K6 275 aaPredicted RBP13.65□□□□□ -0.22
USB1-209ENST00000564387 CHPT1Q8WUD6 406 aa13.65□□□□□ -0.22
USB1-209ENST00000564387 NXF2Q9GZY0 626 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms