RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 ENSAO43768 121 aaKnown RBP8.92□□□□□ -0.98
RNF40-204ENST00000563683 MBP02144 154 aa8.92□□□□□ -0.98
RNF40-204ENST00000563683 AMBPP02760 352 aa8.92□□□□□ -0.98
RNF40-204ENST00000563683 COX5AP20674 150 aa8.92□□□□□ -0.98
RNF40-204ENST00000563683 ACY3Q96HD9 319 aa8.92□□□□□ -0.98
RNF40-204ENST00000563683 MAP1LC3BQ9GZQ8 125 aa8.92□□□□□ -0.98
RNF40-204ENST00000563683 Q9N2K0 584 aa8.92□□□□□ -0.98
RNF40-204ENST00000563683 LYRM2Q9NU23 88 aaPredicted RBP8.92□□□□□ -0.98
RNF40-204ENST00000563683 OR1A1Q9P1Q5 309 aa8.92□□□□□ -0.98
RNF40-204ENST00000563683 IGKV1-27A0A075B6S5 117 aa8.91□□□□□ -0.98
RNF40-204ENST00000563683 PGLYRP1O75594 196 aaPredicted RBP8.91□□□□□ -0.98
RNF40-204ENST00000563683 COX5BP10606 129 aa8.91□□□□□ -0.98
RNF40-204ENST00000563683 UCP3P55916 312 aa8.91□□□□□ -0.98
RNF40-204ENST00000563683 SCCPDHQ8NBX0 429 aa8.91□□□□□ -0.98
RNF40-204ENST00000563683 CA5BP1Q8WTZ4 195 aa8.91□□□□□ -0.98
RNF40-204ENST00000563683 ATP5SQ99766 215 aa8.91□□□□□ -0.98
RNF40-204ENST00000563683 CISD1Q9NZ45 108 aaKnown RBP8.91□□□□□ -0.98
RNF40-204ENST00000563683 MTCH1Q9NZJ7 389 aa8.91□□□□□ -0.98
RNF40-204ENST00000563683 TRAV1-1A0A0B4J248 108 aa8.91□□□□□ -0.98
RNF40-204ENST00000563683 A0A1W2PPQ1 181 aa8.91□□□□□ -0.98
RNF40-204ENST00000563683 XKRY2A2RUG3 117 aa8.91□□□□□ -0.98
RNF40-204ENST00000563683 NTN3O00634 580 aaPredicted RBP8.91□□□□□ -0.98
RNF40-204ENST00000563683 OR2H2O95918 312 aa8.91□□□□□ -0.98
RNF40-204ENST00000563683 CEACAM1P13688 526 aa8.91□□□□□ -0.98
RNF40-204ENST00000563683 G0S2P27469 103 aa8.91□□□□□ -0.98
RNF40-204ENST00000563683 CCKARP32238 428 aa8.91□□□□□ -0.98
RNF40-204ENST00000563683 H1FOOQ8IZA3 346 aaPredicted RBP8.91□□□□□ -0.98
RNF40-204ENST00000563683 OR4X1Q8NH49 305 aa8.91□□□□□ -0.98
RNF40-204ENST00000563683 IGSF23A1L1A6 192 aa8.91□□□□□ -0.98
RNF40-204ENST00000563683 PPP5D1E7EU14 171 aa8.91□□□□□ -0.98
RNF40-204ENST00000563683 SLC25A6P12236 298 aa8.91□□□□□ -0.98
RNF40-204ENST00000563683 MMP9P14780 707 aa8.91□□□□□ -0.98
RNF40-204ENST00000563683 MDH2P40926 338 aaKnown RBP8.91□□□□□ -0.98
RNF40-204ENST00000563683 P2RX4Q99571 388 aa8.91□□□□□ -0.98
RNF40-204ENST00000563683 COL6A6A6NMZ7 2263 aa8.91□□□□□ -0.98
RNF40-204ENST00000563683 LRRC3CA6NJW4 275 aa8.9□□□□□ -0.98
RNF40-204ENST00000563683 C9orf172C9J069 976 aa8.9□□□□□ -0.98
RNF40-204ENST00000563683 M0QZK8 103 aa8.9□□□□□ -0.98
RNF40-204ENST00000563683 GGCTO75223 188 aaKnown RBP8.9□□□□□ -0.98
RNF40-204ENST00000563683 FFAR4Q5NUL3 377 aa8.9□□□□□ -0.98
RNF40-204ENST00000563683 NCR3LG1Q68D85 454 aa8.9□□□□□ -0.98
RNF40-204ENST00000563683 PINX1Q96BK5 328 aaKnown RBP8.9□□□□□ -0.98
RNF40-204ENST00000563683 R3HDM4Q96D70 268 aa8.9□□□□□ -0.98
RNF40-204ENST00000563683 FREM1Q5H8C1 2179 aa8.9□□□□□ -0.98
RNF40-204ENST00000563683 ABCA1O95477 2261 aa8.9□□□□□ -0.98
RNF40-204ENST00000563683 ACP1P24666 158 aa8.9□□□□□ -0.98
RNF40-204ENST00000563683 ERVS71-1P61550 626 aa8.9□□□□□ -0.98
RNF40-204ENST00000563683 PLGLAQ15195 96 aa8.9□□□□□ -0.98
RNF40-204ENST00000563683 GGNQ86UU5 652 aa8.9□□□□□ -0.98
RNF40-204ENST00000563683 SELENOHQ8IZQ5 122 aaKnown RBP8.9□□□□□ -0.98
RNF40-204ENST00000563683 GPR146Q96CH1 333 aa8.9□□□□□ -0.98
RNF40-204ENST00000563683 CYYR1Q96J86 154 aa8.9□□□□□ -0.98
RNF40-204ENST00000563683 CIB3Q96Q77 187 aaPredicted RBP8.9□□□□□ -0.98
RNF40-204ENST00000563683 REPIN1Q9BWE0 567 aaKnown RBP8.9□□□□□ -0.98
RNF40-204ENST00000563683 TIMM8BQ9Y5J9 83 aaPredicted RBP8.9□□□□□ -0.98
RNF40-204ENST00000563683 PROB1E7EW31 1015 aa8.9□□□□□ -0.98
RNF40-204ENST00000563683 AQP7O14520 342 aa8.9□□□□□ -0.98
RNF40-204ENST00000563683 CRYGSP22914 178 aa8.9□□□□□ -0.98
RNF40-204ENST00000563683 GNG10P50151 68 aa8.9□□□□□ -0.98
RNF40-204ENST00000563683 Q0VFX4 171 aa8.9□□□□□ -0.98
RNF40-204ENST00000563683 COA6Q5JTJ3 125 aaKnown RBP8.9□□□□□ -0.98
RNF40-204ENST00000563683 TGIF2LYQ8IUE0 185 aa8.9□□□□□ -0.98
RNF40-204ENST00000563683 OR52L2PQ8NGH6 319 aa8.9□□□□□ -0.98
RNF40-204ENST00000563683 SDF2L1Q9HCN8 221 aa8.9□□□□□ -0.98
RNF40-204ENST00000563683 MED13LQ71F56 2210 aa8.9□□□□□ -0.98
RNF40-204ENST00000563683 ABCA4P78363 2273 aa8.9□□□□□ -0.99
RNF40-204ENST00000563683 SP9P0CG40 484 aa8.9□□□□□ -0.99
RNF40-204ENST00000563683 BCL2P10415 239 aa8.9□□□□□ -0.99
RNF40-204ENST00000563683 RBPJQ06330 500 aa8.9□□□□□ -0.99
RNF40-204ENST00000563683 HIST3H3Q16695 136 aa8.9□□□□□ -0.99
RNF40-204ENST00000563683 KCNIP4Q6PIL6 250 aa8.9□□□□□ -0.99
RNF40-204ENST00000563683 MRPL41Q8IXM3 137 aaKnown RBP8.9□□□□□ -0.99
RNF40-204ENST00000563683 LYG1Q8N1E2 194 aa8.9□□□□□ -0.99
RNF40-204ENST00000563683 GMPPAQ96IJ6 420 aaPredicted RBP8.9□□□□□ -0.99
RNF40-204ENST00000563683 CLN8Q9UBY8 286 aa8.9□□□□□ -0.99
RNF40-204ENST00000563683 LAMP3Q9UQV4 416 aa8.9□□□□□ -0.99
RNF40-204ENST00000563683 PRRG2O14669 202 aa8.89□□□□□ -0.99
RNF40-204ENST00000563683 ZNF737O75373 536 aa8.89□□□□□ -0.99
RNF40-204ENST00000563683 CRYABP02511 175 aaKnown RBP8.89□□□□□ -0.99
RNF40-204ENST00000563683 FAM214BQ7L5A3 538 aa8.89□□□□□ -0.99
RNF40-204ENST00000563683 C1QTNF5Q9BXJ0 243 aa8.89□□□□□ -0.99
RNF40-204ENST00000563683 CXXC4Q9H2H0 198 aa8.89□□□□□ -0.99
RNF40-204ENST00000563683 A8MXE2 369 aa8.89□□□□□ -0.99
RNF40-204ENST00000563683 EREGO14944 169 aa8.89□□□□□ -0.99
RNF40-204ENST00000563683 ZNF25P17030 456 aaPredicted RBP8.89□□□□□ -0.99
RNF40-204ENST00000563683 ERVFC1-1P60608 527 aa8.89□□□□□ -0.99
RNF40-204ENST00000563683 FAM90A2PQ658T7 463 aa8.89□□□□□ -0.99
RNF40-204ENST00000563683 ZNF880Q6PDB4 577 aa8.89□□□□□ -0.99
RNF40-204ENST00000563683 OR1L1Q8NH94 360 aa8.89□□□□□ -0.99
RNF40-204ENST00000563683 TAAR6Q96RI8 345 aa8.89□□□□□ -0.99
RNF40-204ENST00000563683 IGHV3OR15-7A0A075B7D8 119 aa8.89□□□□□ -0.99
RNF40-204ENST00000563683 LY6G6EA0A0G2JKS1 128 aa8.89□□□□□ -0.99
RNF40-204ENST00000563683 ZNF705FA8MVS1 300 aaPredicted RBP8.89□□□□□ -0.99
RNF40-204ENST00000563683 NEURL1O76050 574 aa8.89□□□□□ -0.99
RNF40-204ENST00000563683 ZNF705DP0CH99 300 aaPredicted RBP8.89□□□□□ -0.99
RNF40-204ENST00000563683 ZNF705BP0CI00 300 aaPredicted RBP8.89□□□□□ -0.99
RNF40-204ENST00000563683 HTD2P86397 168 aa8.89□□□□□ -0.99
RNF40-204ENST00000563683 COL10A1Q03692 680 aa8.89□□□□□ -0.99
RNF40-204ENST00000563683 ACOT6Q3I5F7 207 aaPredicted RBP8.89□□□□□ -0.99
RNF40-204ENST00000563683 ZNF66Q6ZN08 573 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms