RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 MSMO1Q15800 293 aa10.87□□□□□ -0.67
CCDC187-201ENST00000563590 SPINK14Q6IE38 97 aa10.87□□□□□ -0.67
CCDC187-201ENST00000563590 AAED1Q7RTV5 226 aa10.87□□□□□ -0.67
CCDC187-201ENST00000563590 OR1L6Q8NGR2 347 aa10.87□□□□□ -0.67
CCDC187-201ENST00000563590 RNASEH2CQ8TDP1 164 aaKnown RBP10.87□□□□□ -0.67
CCDC187-201ENST00000563590 APH1AQ96BI3 265 aa10.87□□□□□ -0.67
CCDC187-201ENST00000563590 ANGPTL4Q9BY76 406 aa10.87□□□□□ -0.67
CCDC187-201ENST00000563590 GCM1Q9NP62 436 aa10.87□□□□□ -0.67
CCDC187-201ENST00000563590 IGKV1-27A0A075B6S5 117 aa10.87□□□□□ -0.67
CCDC187-201ENST00000563590 IGKV1-12A0A0C4DH73 117 aa10.87□□□□□ -0.67
CCDC187-201ENST00000563590 LILRA5A6NI73 299 aa10.87□□□□□ -0.67
CCDC187-201ENST00000563590 IGKV1D-12P01611 117 aa10.87□□□□□ -0.67
CCDC187-201ENST00000563590 IGLV3-19P01714 112 aa10.87□□□□□ -0.67
CCDC187-201ENST00000563590 IGHV3-13P01766 116 aa10.87□□□□□ -0.67
CCDC187-201ENST00000563590 IGHV3-7P01780 117 aa10.87□□□□□ -0.67
CCDC187-201ENST00000563590 ARL16Q0P5N6 197 aa10.87□□□□□ -0.67
CCDC187-201ENST00000563590 C22orf15Q8WYQ4 148 aa10.87□□□□□ -0.67
CCDC187-201ENST00000563590 MIEN1Q9BRT3 115 aa10.87□□□□□ -0.67
CCDC187-201ENST00000563590 SERF1AO75920 110 aa10.87□□□□□ -0.67
CCDC187-201ENST00000563590 HOXA6P31267 233 aa10.87□□□□□ -0.67
CCDC187-201ENST00000563590 SPATA45Q537H7 98 aa10.87□□□□□ -0.67
CCDC187-201ENST00000563590 SPSB1Q96BD6 273 aa10.87□□□□□ -0.67
CCDC187-201ENST00000563590 RAB40CQ96S21 281 aa10.87□□□□□ -0.67
CCDC187-201ENST00000563590 DERL1Q9BUN8 251 aa10.87□□□□□ -0.67
CCDC187-201ENST00000563590 FAM234AQ9H0X4 552 aa10.87□□□□□ -0.67
CCDC187-201ENST00000563590 CLN8Q9UBY8 286 aa10.87□□□□□ -0.67
CCDC187-201ENST00000563590 PLCE1Q9P212 2302 aa10.86□□□□□ -0.67
CCDC187-201ENST00000563590 TRAPPC2LH3BP13 241 aa10.86□□□□□ -0.67
CCDC187-201ENST00000563590 SLC17A3O00476 420 aa10.86□□□□□ -0.67
CCDC187-201ENST00000563590 BRS3P32247 399 aa10.86□□□□□ -0.67
CCDC187-201ENST00000563590 ADMP35318 185 aa10.86□□□□□ -0.67
CCDC187-201ENST00000563590 CISD2Q8N5K1 135 aaKnown RBP10.86□□□□□ -0.67
CCDC187-201ENST00000563590 OR8G5Q8NG78 346 aa10.86□□□□□ -0.67
CCDC187-201ENST00000563590 LOC102725191A0A1B0GVB3 256 aa10.86□□□□□ -0.67
CCDC187-201ENST00000563590 SLC22A20A6NK97 555 aa10.86□□□□□ -0.67
CCDC187-201ENST00000563590 ZNF32P17041 273 aa10.86□□□□□ -0.67
CCDC187-201ENST00000563590 BCL3P20749 454 aa10.86□□□□□ -0.67
CCDC187-201ENST00000563590 LHFPL2Q6ZUX7 228 aa10.86□□□□□ -0.67
CCDC187-201ENST00000563590 MKXQ8IYA7 352 aa10.86□□□□□ -0.67
CCDC187-201ENST00000563590 ARL6IP6Q8N6S5 226 aa10.86□□□□□ -0.67
CCDC187-201ENST00000563590 SPACA9Q96E40 222 aaPredicted RBP10.86□□□□□ -0.67
CCDC187-201ENST00000563590 TMEM106BQ9NUM4 274 aa10.86□□□□□ -0.67
CCDC187-201ENST00000563590 NOTCH3Q9UM47 2321 aa10.86□□□□□ -0.67
CCDC187-201ENST00000563590 PCNX2A6NKB5 2137 aa10.86□□□□□ -0.67
CCDC187-201ENST00000563590 TRAV38-1A0A0B4J264 116 aa10.85□□□□□ -0.67
CCDC187-201ENST00000563590 SLC25A6P12236 298 aa10.85□□□□□ -0.67
CCDC187-201ENST00000563590 EPHA8P29322 1005 aaPredicted RBP10.85□□□□□ -0.67
CCDC187-201ENST00000563590 PHYHD1Q5SRE7 291 aa10.85□□□□□ -0.67
CCDC187-201ENST00000563590 LEMD1Q68G75 181 aa10.85□□□□□ -0.67
CCDC187-201ENST00000563590 UNQ5815/PRO19632Q6UWF5 114 aa10.85□□□□□ -0.67
CCDC187-201ENST00000563590 ABHD3Q8WU67 409 aa10.85□□□□□ -0.67
CCDC187-201ENST00000563590 TAF15Q92804 592 aaKnown RBP eCLIP10.85□□□□□ -0.67
CCDC187-201ENST00000563590 PINX1Q96BK5 328 aaKnown RBP10.85□□□□□ -0.67
CCDC187-201ENST00000563590 C11orf1Q9H5F2 150 aa10.85□□□□□ -0.67
CCDC187-201ENST00000563590 NAT8BQ9UHF3 227 aa10.85□□□□□ -0.67
CCDC187-201ENST00000563590 TNRC18O15417 2968 aaPredicted RBP10.85□□□□□ -0.67
CCDC187-201ENST00000563590 SNURFLB1AK76 121 aa10.85□□□□□ -0.67
CCDC187-201ENST00000563590 LILRA1O75019 489 aa10.85□□□□□ -0.67
CCDC187-201ENST00000563590 PGLYRP1O75594 196 aaPredicted RBP10.85□□□□□ -0.67
CCDC187-201ENST00000563590 MGST1P10620 155 aaKnown RBP10.85□□□□□ -0.67
CCDC187-201ENST00000563590 MSX1P28360 303 aa10.85□□□□□ -0.67
CCDC187-201ENST00000563590 DNLZQ5SXM8 178 aa10.85□□□□□ -0.67
CCDC187-201ENST00000563590 RPP25LQ8N5L8 163 aaKnown RBP10.85□□□□□ -0.67
CCDC187-201ENST00000563590 CLDN23Q96B33 292 aa10.85□□□□□ -0.67
CCDC187-201ENST00000563590 ANAPC16Q96DE5 110 aa10.85□□□□□ -0.67
CCDC187-201ENST00000563590 TRAPPC2LQ9UL33 140 aa10.85□□□□□ -0.67
CCDC187-201ENST00000563590 M0R296 226 aa10.85□□□□□ -0.67
CCDC187-201ENST00000563590 COX5AP20674 150 aa10.85□□□□□ -0.67
CCDC187-201ENST00000563590 RSPO1Q2MKA7 263 aaPredicted RBP10.85□□□□□ -0.67
CCDC187-201ENST00000563590 CEACAM16Q2WEN9 425 aa10.85□□□□□ -0.67
CCDC187-201ENST00000563590 PRR31Q5SQ13 230 aa10.85□□□□□ -0.67
CCDC187-201ENST00000563590 VHLLQ6RSH7 139 aa10.85□□□□□ -0.67
CCDC187-201ENST00000563590 CXorf67Q86X51 503 aaPredicted RBP10.85□□□□□ -0.67
CCDC187-201ENST00000563590 CPEB3Q8NE35 698 aaKnown RBP10.85□□□□□ -0.67
CCDC187-201ENST00000563590 RNASE8Q8TDE3 154 aaKnown RBP10.85□□□□□ -0.67
CCDC187-201ENST00000563590 DNASE2BQ8WZ79 361 aa10.85□□□□□ -0.67
CCDC187-201ENST00000563590 HINT2Q9BX68 163 aa10.85□□□□□ -0.67
CCDC187-201ENST00000563590 TMEM242Q9NWH2 141 aa10.85□□□□□ -0.67
CCDC187-201ENST00000563590 IGHV5-10-1A0A0J9YXX1 117 aa10.84□□□□□ -0.67
CCDC187-201ENST00000563590 NAPSAO96009 420 aa10.84□□□□□ -0.67
CCDC187-201ENST00000563590 IGLV3-1P01715 115 aa10.84□□□□□ -0.67
CCDC187-201ENST00000563590 F2RP25116 425 aa10.84□□□□□ -0.67
CCDC187-201ENST00000563590 ATP5G3P48201 142 aa10.84□□□□□ -0.67
CCDC187-201ENST00000563590 ID3Q02535 119 aa10.84□□□□□ -0.67
CCDC187-201ENST00000563590 PLPPR5Q32ZL2 321 aa10.84□□□□□ -0.67
CCDC187-201ENST00000563590 PMS2CLQ68D20 193 aa10.84□□□□□ -0.67
CCDC187-201ENST00000563590 NUFIP2Q7Z417 695 aaKnown RBP10.84□□□□□ -0.67
CCDC187-201ENST00000563590 ODF3L1Q8IXM7 274 aa10.84□□□□□ -0.67
CCDC187-201ENST00000563590 FAM58AQ8N1B3 248 aa10.84□□□□□ -0.67
CCDC187-201ENST00000563590 SLC35E1Q96K37 410 aa10.84□□□□□ -0.67
CCDC187-201ENST00000563590 P2RX4Q99571 388 aa10.84□□□□□ -0.67
CCDC187-201ENST00000563590 HES7Q9BYE0 225 aa10.84□□□□□ -0.67
CCDC187-201ENST00000563590 TECTAO75443 2155 aa10.84□□□□□ -0.67
CCDC187-201ENST00000563590 ARFGEF3Q5TH69 2177 aa10.84□□□□□ -0.67
CCDC187-201ENST00000563590 FOLR3P41439 243 aa10.84□□□□□ -0.67
CCDC187-201ENST00000563590 ZFP36L1Q07352 338 aaKnown RBP10.84□□□□□ -0.67
CCDC187-201ENST00000563590 MRPL21Q7Z2W9 205 aaKnown RBP10.84□□□□□ -0.67
CCDC187-201ENST00000563590 ZNF439Q8NDP4 499 aa10.84□□□□□ -0.67
CCDC187-201ENST00000563590 PLPPR1Q8TBJ4 325 aa10.84□□□□□ -0.67
CCDC187-201ENST00000563590 ZNF596Q8TC21 504 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms