RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 PIN1P1O15428 100 aa5.44□□□□□ -1.54
CLK3-212ENST00000563418 IGLC2P0DOY2 106 aa5.44□□□□□ -1.54
CLK3-212ENST00000563418 IGLC3P0DOY3 106 aa5.44□□□□□ -1.54
CLK3-212ENST00000563418 ZNF157P51786 506 aaPredicted RBP5.44□□□□□ -1.54
CLK3-212ENST00000563418 ZNF519Q8TB69 540 aa5.44□□□□□ -1.54
CLK3-212ENST00000563418 ZNF479Q96JC4 524 aa5.44□□□□□ -1.54
CLK3-212ENST00000563418 A8MWV9 139 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 ASAH2BP0C7U1 165 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 ERVK11-1P61568 191 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 MPV17L2Q567V2 206 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 KISS1RQ969F8 398 aaPredicted RBP5.43□□□□□ -1.54
CLK3-212ENST00000563418 GGTLC1Q9BX51 225 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 GPR27Q9NS67 375 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 ICAM5Q9UMF0 924 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 NYNRINQ9P2P1 1898 aaKnown RBP5.43□□□□□ -1.54
CLK3-212ENST00000563418 A0A1W2PRU2 124 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 RELBQ01201 579 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 ZNF750Q32MQ0 723 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 SFXN3Q9BWM7 321 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 LINC00470Q9BZP3 86 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 LY96Q9Y6Y9 160 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.43□□□□□ -1.54
CLK3-212ENST00000563418 J3QRE1 110 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 CCL16O15467 120 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 ANKRD33Q7Z3H0 272 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 ZDHHC23Q8IYP9 409 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 OXGR1Q96P68 337 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 SMIM14Q96QK8 99 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 TMEM126AQ9H061 195 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 ANK1P16157 1881 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 RALGAPA2Q2PPJ7 1873 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 C9orf172C9J069 976 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 TIAF1O95411 115 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 DUSP3P51452 185 aaPredicted RBP5.43□□□□□ -1.54
CLK3-212ENST00000563418 LY6G5CQ5SRR4 150 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 STRCP1A6NGW2 1772 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 LRTM2Q8N967 370 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 KREMEN2Q8NCW0 462 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 ABHD5Q8WTS1 349 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 OR5P3Q8WZ94 311 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 SPACA9Q96E40 222 aaPredicted RBP5.43□□□□□ -1.54
CLK3-212ENST00000563418 KLHDC7BQ96G42 594 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 SGK494Q96LW2 274 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 FRG2CA6NGY1 282 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 GPX1P07203 203 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 POU2F2P09086 479 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 SSBP2P81877 361 aaPredicted RBP5.43□□□□□ -1.54
CLK3-212ENST00000563418 MGAT2Q10469 447 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 C1QL3Q5VWW1 255 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 OR52M1Q8NGK5 317 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 S1PR3Q99500 378 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 FBLN5Q9UBX5 448 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 UPK3AO75631 287 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 CHRNA10Q9GZZ6 450 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 SERGEFQ9UGK8 458 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 TRAV8-2A0A0B4J237 113 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 TMEM30CPA0ZSE6 113 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 GAGE12JA6NER3 117 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 AHRRA9YTQ3 701 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 B4DGG1 531 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 HS3ST1O14792 307 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 SYNGR1O43759 233 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 GAGE7O76087 117 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 GAGE12FP0CL80 117 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 GAGE12GP0CL81 117 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 GAGE12IP0CL82 117 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 GAGE4Q13068 117 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 RPRMQ9NS64 109 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 MYLKQ15746 1914 aa5.43□□□□□ -1.54
CLK3-212ENST00000563418 MT-CO3P00414 261 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 ARG2P78540 354 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 PSG9Q00887 426 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 Q6AWC8 147 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 MORN3Q6PF18 240 aaPredicted RBP5.42□□□□□ -1.54
CLK3-212ENST00000563418 MUC15Q8N387 334 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 TDRD15B5MCY1 1934 aaKnown RBP5.42□□□□□ -1.54
CLK3-212ENST00000563418 FAM89BQ8N5H3 189 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 RTN4RQ9BZR6 473 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 UBE2ZQ9H832 354 aaPredicted RBP5.42□□□□□ -1.54
CLK3-212ENST00000563418 RBPJLQ9UBG7 517 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 A0A0U1RQV5 110 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 TMEM202A6NGA9 273 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 KLF4O43474 513 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 RBM11P57052 281 aaKnown RBP5.42□□□□□ -1.54
CLK3-212ENST00000563418 ACSM6Q6P461 480 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 DLX4Q92988 240 aaPredicted RBP5.42□□□□□ -1.54
CLK3-212ENST00000563418 FER1L6-AS2Q96M78 137 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 AURKAIP1Q9NWT8 199 aaPredicted RBP5.42□□□□□ -1.54
CLK3-212ENST00000563418 SMPXQ9UHP9 88 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 MUC21A0A0G2JKD1 596 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 MUC21A0A140T8X8 626 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 ODAMA1E959 279 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 ZGLP1P0C6A0 271 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 MUC21Q5SSG8 566 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 OR1F12Q8NHA8 337 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 IL18BPO95998 194 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 FOXK1P85037 733 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 ZNF77Q15935 545 aa5.42□□□□□ -1.54
CLK3-212ENST00000563418 HSD17B10Q99714 261 aaKnown RBP5.42□□□□□ -1.54
CLK3-212ENST00000563418 ERRFI1Q9UJM3 462 aaPredicted RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms