RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 SPIN3Q5JUX0 258 aa11.94□□□□□ -0.5
GTF3C1-203ENST00000562609 PEAR1Q5VY43 1037 aaPredicted RBP11.94□□□□□ -0.5
GTF3C1-203ENST00000562609 TBC1D26Q86UD7 250 aa11.94□□□□□ -0.5
GTF3C1-203ENST00000562609 NCOA6Q14686 2063 aaPredicted RBP11.94□□□□□ -0.5
GTF3C1-203ENST00000562609 DKK1O94907 266 aa11.94□□□□□ -0.5
GTF3C1-203ENST00000562609 OTX2P32243 289 aa11.94□□□□□ -0.5
GTF3C1-203ENST00000562609 DUSP3P51452 185 aaPredicted RBP11.94□□□□□ -0.5
GTF3C1-203ENST00000562609 DOK3Q7L591 496 aa11.94□□□□□ -0.5
GTF3C1-203ENST00000562609 SIGLECL1Q8N7X8 197 aa11.94□□□□□ -0.5
GTF3C1-203ENST00000562609 SGMS2Q8NHU3 365 aa11.94□□□□□ -0.5
GTF3C1-203ENST00000562609 IMMP1LQ96LU5 166 aa11.94□□□□□ -0.5
GTF3C1-203ENST00000562609 Q96M66 194 aa11.94□□□□□ -0.5
GTF3C1-203ENST00000562609 TMEM56Q96MV1 263 aa11.94□□□□□ -0.5
GTF3C1-203ENST00000562609 TMEM56-RWDD3S4R434 201 aa11.94□□□□□ -0.5
GTF3C1-203ENST00000562609 C5orf63A6NC05 138 aa11.93□□□□□ -0.5
GTF3C1-203ENST00000562609 HS3ST1O14792 307 aa11.93□□□□□ -0.5
GTF3C1-203ENST00000562609 MMP23AO75900 390 aa11.93□□□□□ -0.5
GTF3C1-203ENST00000562609 ESDP10768 282 aa11.93□□□□□ -0.5
GTF3C1-203ENST00000562609 GNRHRP30968 328 aa11.93□□□□□ -0.5
GTF3C1-203ENST00000562609 LHX2P50458 406 aa11.93□□□□□ -0.5
GTF3C1-203ENST00000562609 ZP4Q12836 540 aa11.93□□□□□ -0.5
GTF3C1-203ENST00000562609 WDR54Q9H977 334 aa11.93□□□□□ -0.5
GTF3C1-203ENST00000562609 ZNF586Q9NXT0 402 aa11.93□□□□□ -0.5
GTF3C1-203ENST00000562609 ELOVL5Q9NYP7 299 aa11.93□□□□□ -0.5
GTF3C1-203ENST00000562609 LHFPL6Q9Y693 200 aa11.93□□□□□ -0.5
GTF3C1-203ENST00000562609 DOCK10Q96BY6 2186 aa11.93□□□□□ -0.5
GTF3C1-203ENST00000562609 A0A1W2PR80 420 aa11.93□□□□□ -0.5
GTF3C1-203ENST00000562609 C1QTNF9BB2RNN3 333 aa11.93□□□□□ -0.5
GTF3C1-203ENST00000562609 CBLN1P23435 193 aa11.93□□□□□ -0.5
GTF3C1-203ENST00000562609 DTYMKP23919 212 aa11.93□□□□□ -0.5
GTF3C1-203ENST00000562609 TSPOP30536 169 aa11.93□□□□□ -0.5
GTF3C1-203ENST00000562609 DAP3P51398 398 aaKnown RBP11.93□□□□□ -0.5
GTF3C1-203ENST00000562609 SUMO3P55854 103 aaPredicted RBP11.93□□□□□ -0.5
GTF3C1-203ENST00000562609 RNF138Q8WVD3 245 aa11.93□□□□□ -0.5
GTF3C1-203ENST00000562609 PSMG3Q9BT73 122 aaPredicted RBP11.93□□□□□ -0.5
GTF3C1-203ENST00000562609 ALKBH4Q9NXW9 302 aa11.93□□□□□ -0.5
GTF3C1-203ENST00000562609 DOCK11Q5JSL3 2073 aa11.93□□□□□ -0.5
GTF3C1-203ENST00000562609 ARHGAP21Q5T5U3 1957 aa11.93□□□□□ -0.5
GTF3C1-203ENST00000562609 AQP7P3A6NL99 342 aa11.92□□□□□ -0.5
GTF3C1-203ENST00000562609 E9PLN8 166 aa11.92□□□□□ -0.5
GTF3C1-203ENST00000562609 VENTXO95231 258 aa11.92□□□□□ -0.5
GTF3C1-203ENST00000562609 SERF2P84101 59 aa11.92□□□□□ -0.5
GTF3C1-203ENST00000562609 NMSQ5H8A3 153 aa11.92□□□□□ -0.5
GTF3C1-203ENST00000562609 RPP25LQ8N5L8 163 aaKnown RBP11.92□□□□□ -0.5
GTF3C1-203ENST00000562609 OR2Y1Q8NGV0 311 aa11.92□□□□□ -0.5
GTF3C1-203ENST00000562609 GPR146Q96CH1 333 aa11.92□□□□□ -0.5
GTF3C1-203ENST00000562609 SLC35D1Q9NTN3 355 aa11.92□□□□□ -0.5
GTF3C1-203ENST00000562609 CNOT1A5YKK6 2376 aaKnown RBP11.92□□□□□ -0.5
GTF3C1-203ENST00000562609 ANGPTL7O43827 346 aa11.92□□□□□ -0.5
GTF3C1-203ENST00000562609 WDR1O75083 606 aa11.92□□□□□ -0.5
GTF3C1-203ENST00000562609 PPYP01298 95 aa11.92□□□□□ -0.5
GTF3C1-203ENST00000562609 FAHP16930 419 aa11.92□□□□□ -0.5
GTF3C1-203ENST00000562609 ACSF3Q4G176 576 aaPredicted RBP11.92□□□□□ -0.5
GTF3C1-203ENST00000562609 CLN8Q9UBY8 286 aa11.92□□□□□ -0.5
GTF3C1-203ENST00000562609 LOC102723996A0A087X1L8 192 aa11.92□□□□□ -0.5
GTF3C1-203ENST00000562609 RER1O15258 196 aa11.92□□□□□ -0.5
GTF3C1-203ENST00000562609 IGKV1D-33P01593 117 aa11.92□□□□□ -0.5
GTF3C1-203ENST00000562609 IGKV1-33P01594 117 aa11.92□□□□□ -0.5
GTF3C1-203ENST00000562609 PSG1P11464 419 aa11.92□□□□□ -0.5
GTF3C1-203ENST00000562609 VDAC1P21796 283 aa11.92□□□□□ -0.5
GTF3C1-203ENST00000562609 YPEL3P61236 119 aaPredicted RBP11.92□□□□□ -0.5
GTF3C1-203ENST00000562609 FOXL1Q12952 345 aa11.92□□□□□ -0.5
GTF3C1-203ENST00000562609 RAET1LQ5VY80 246 aa11.92□□□□□ -0.5
GTF3C1-203ENST00000562609 RPS19BP1Q86WX3 136 aaKnown RBP11.92□□□□□ -0.5
GTF3C1-203ENST00000562609 BCL2L2Q92843 193 aaPredicted RBP11.92□□□□□ -0.5
GTF3C1-203ENST00000562609 TAAR3PQ9P1P4 343 aa11.92□□□□□ -0.5
GTF3C1-203ENST00000562609 CCL1P22362 96 aa11.91□□□□□ -0.5
GTF3C1-203ENST00000562609 FOLR3P41439 243 aa11.91□□□□□ -0.5
GTF3C1-203ENST00000562609 CLRN1P58418 232 aa11.91□□□□□ -0.5
GTF3C1-203ENST00000562609 ARL16Q0P5N6 197 aa11.91□□□□□ -0.5
GTF3C1-203ENST00000562609 ZNF295-AS1Q8N0V1 137 aa11.91□□□□□ -0.5
GTF3C1-203ENST00000562609 PINX1Q96BK5 328 aaKnown RBP11.91□□□□□ -0.5
GTF3C1-203ENST00000562609 WNT10AQ9GZT5 417 aa11.91□□□□□ -0.5
GTF3C1-203ENST00000562609 SLC25A22Q9H936 323 aa11.91□□□□□ -0.5
GTF3C1-203ENST00000562609 PROK2Q9HC23 129 aa11.91□□□□□ -0.5
GTF3C1-203ENST00000562609 A0A0G2JMM0 328 aa11.91□□□□□ -0.5
GTF3C1-203ENST00000562609 A0A1W2PPB8 328 aa11.91□□□□□ -0.5
GTF3C1-203ENST00000562609 A0A1W2PRS3 328 aa11.91□□□□□ -0.5
GTF3C1-203ENST00000562609 KIR3DP1A8MWS1 328 aa11.91□□□□□ -0.5
GTF3C1-203ENST00000562609 C1QTNF9P0C862 333 aa11.91□□□□□ -0.5
GTF3C1-203ENST00000562609 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.91□□□□□ -0.5
GTF3C1-203ENST00000562609 ZNF525Q8N782 197 aa11.91□□□□□ -0.5
GTF3C1-203ENST00000562609 UCN2Q96RP3 112 aa11.91□□□□□ -0.5
GTF3C1-203ENST00000562609 IL19Q9UHD0 177 aa11.91□□□□□ -0.5
GTF3C1-203ENST00000562609 EGR1P18146 543 aa11.9□□□□□ -0.5
GTF3C1-203ENST00000562609 LHFPL4Q7Z7J7 247 aa11.9□□□□□ -0.5
GTF3C1-203ENST00000562609 KLHDC1Q8N7A1 406 aa11.9□□□□□ -0.5
GTF3C1-203ENST00000562609 ZNF596Q8TC21 504 aa11.9□□□□□ -0.5
GTF3C1-203ENST00000562609 NEIL1Q96FI4 390 aaPredicted RBP11.9□□□□□ -0.5
GTF3C1-203ENST00000562609 MRPS16Q9Y3D3 137 aaKnown RBP11.9□□□□□ -0.5
GTF3C1-203ENST00000562609 LOXL2Q9Y4K0 774 aa11.9□□□□□ -0.5
GTF3C1-203ENST00000562609 TBL2Q9Y4P3 447 aaKnown RBP11.9□□□□□ -0.5
GTF3C1-203ENST00000562609 PCNX2A6NKB5 2137 aa11.9□□□□□ -0.5
GTF3C1-203ENST00000562609 MED13Q9UHV7 2174 aa11.9□□□□□ -0.5
GTF3C1-203ENST00000562609 MLNRO43193 412 aa11.9□□□□□ -0.5
GTF3C1-203ENST00000562609 TRAF3IP2O43734 574 aaPredicted RBP11.9□□□□□ -0.5
GTF3C1-203ENST00000562609 PAGE4O60829 102 aa11.9□□□□□ -0.5
GTF3C1-203ENST00000562609 GPX1P07203 203 aa11.9□□□□□ -0.5
GTF3C1-203ENST00000562609 SSR4P51571 173 aa11.9□□□□□ -0.5
GTF3C1-203ENST00000562609 LRRC75BQ2VPJ9 315 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms