RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 IGHEP01854 428 aa11.79□□□□□ -0.52
VPS9D1-202ENST00000561976 RELQ04864 619 aaPredicted RBP11.79□□□□□ -0.52
VPS9D1-202ENST00000561976 SLC10A1Q14973 349 aa11.79□□□□□ -0.52
VPS9D1-202ENST00000561976 ACOT6Q3I5F7 207 aaPredicted RBP11.79□□□□□ -0.52
VPS9D1-202ENST00000561976 KCNIP4Q6PIL6 250 aa11.79□□□□□ -0.52
VPS9D1-202ENST00000561976 ZNF497Q6ZNH5 498 aa11.79□□□□□ -0.52
VPS9D1-202ENST00000561976 CENPVQ7Z7K6 275 aaPredicted RBP11.79□□□□□ -0.52
VPS9D1-202ENST00000561976 TGIF2LXQ8IUE1 241 aa11.79□□□□□ -0.52
VPS9D1-202ENST00000561976 ZNF808Q8N4W9 903 aaPredicted RBP11.79□□□□□ -0.52
VPS9D1-202ENST00000561976 OR10P1Q8NGE3 313 aa11.79□□□□□ -0.52
VPS9D1-202ENST00000561976 NEIL1Q96FI4 390 aaPredicted RBP11.79□□□□□ -0.52
VPS9D1-202ENST00000561976 UBE2ZQ9H832 354 aaPredicted RBP11.79□□□□□ -0.52
VPS9D1-202ENST00000561976 PLA2G3Q9NZ20 509 aa11.79□□□□□ -0.52
VPS9D1-202ENST00000561976 RAMP3O60896 148 aa11.78□□□□□ -0.52
VPS9D1-202ENST00000561976 TFF3Q07654 80 aa11.78□□□□□ -0.52
VPS9D1-202ENST00000561976 ATP6V1FQ16864 119 aa11.78□□□□□ -0.52
VPS9D1-202ENST00000561976 ACTL10Q5JWF8 245 aa11.78□□□□□ -0.52
VPS9D1-202ENST00000561976 ESPL1Q14674 2120 aa11.78□□□□□ -0.52
VPS9D1-202ENST00000561976 DEFA4P12838 97 aa11.78□□□□□ -0.52
VPS9D1-202ENST00000561976 WNT5AP41221 380 aa11.78□□□□□ -0.52
VPS9D1-202ENST00000561976 PRSS8Q16651 343 aa11.78□□□□□ -0.52
VPS9D1-202ENST00000561976 WFIKKN1Q96NZ8 548 aa11.78□□□□□ -0.52
VPS9D1-202ENST00000561976 OR6C3Q9NZP0 311 aa11.78□□□□□ -0.52
VPS9D1-202ENST00000561976 HSPB7Q9UBY9 170 aa11.78□□□□□ -0.52
VPS9D1-202ENST00000561976 TP53TG5Q9Y2B4 290 aa11.78□□□□□ -0.52
VPS9D1-202ENST00000561976 SRP14P37108 136 aaKnown RBP11.77□□□□□ -0.53
VPS9D1-202ENST00000561976 LHX2P50458 406 aa11.77□□□□□ -0.53
VPS9D1-202ENST00000561976 GNB2P62879 340 aa11.77□□□□□ -0.53
VPS9D1-202ENST00000561976 FAM78BQ5VT40 261 aa11.77□□□□□ -0.53
VPS9D1-202ENST00000561976 CISD2Q8N5K1 135 aaKnown RBP11.77□□□□□ -0.53
VPS9D1-202ENST00000561976 OR2D2Q9H210 308 aa11.77□□□□□ -0.53
VPS9D1-202ENST00000561976 AURKAIP1Q9NWT8 199 aaPredicted RBP11.77□□□□□ -0.53
VPS9D1-202ENST00000561976 WASF3Q9UPY6 502 aa11.77□□□□□ -0.53
VPS9D1-202ENST00000561976 FAM166BA8MTA8 275 aa11.77□□□□□ -0.53
VPS9D1-202ENST00000561976 C1QTNF9BB2RNN3 333 aa11.77□□□□□ -0.53
VPS9D1-202ENST00000561976 B4E171 279 aa11.77□□□□□ -0.53
VPS9D1-202ENST00000561976 C11orf94C9JXX5 98 aa11.77□□□□□ -0.53
VPS9D1-202ENST00000561976 ZG16O60844 167 aa11.77□□□□□ -0.53
VPS9D1-202ENST00000561976 GGCTO75223 188 aaKnown RBP11.77□□□□□ -0.53
VPS9D1-202ENST00000561976 NXPH2O95156 264 aa11.77□□□□□ -0.53
VPS9D1-202ENST00000561976 SFTPCP11686 197 aa11.77□□□□□ -0.53
VPS9D1-202ENST00000561976 BMP5P22003 454 aa11.77□□□□□ -0.53
VPS9D1-202ENST00000561976 TSPAN7P41732 249 aa11.77□□□□□ -0.53
VPS9D1-202ENST00000561976 PDLIM4P50479 330 aa11.77□□□□□ -0.53
VPS9D1-202ENST00000561976 TRA2AQ13595 282 aaKnown RBP eCLIP11.77□□□□□ -0.53
VPS9D1-202ENST00000561976 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.77□□□□□ -0.53
VPS9D1-202ENST00000561976 DOCK7Q96N67 2140 aa11.76□□□□□ -0.53
VPS9D1-202ENST00000561976 ODAMA1E959 279 aa11.76□□□□□ -0.53
VPS9D1-202ENST00000561976 LRRC30A6NM36 301 aa11.76□□□□□ -0.53
VPS9D1-202ENST00000561976 TCAPO15273 167 aa11.76□□□□□ -0.53
VPS9D1-202ENST00000561976 IL18BPO95998 194 aa11.76□□□□□ -0.53
VPS9D1-202ENST00000561976 OR4A8P0C604 315 aa11.76□□□□□ -0.53
VPS9D1-202ENST00000561976 RAC2P15153 192 aa11.76□□□□□ -0.53
VPS9D1-202ENST00000561976 CNN1P51911 297 aaKnown RBP11.76□□□□□ -0.53
VPS9D1-202ENST00000561976 PAX5Q02548 391 aa11.76□□□□□ -0.53
VPS9D1-202ENST00000561976 SPINK9Q5DT21 86 aa11.76□□□□□ -0.53
VPS9D1-202ENST00000561976 VASH2Q86V25 355 aa11.76□□□□□ -0.53
VPS9D1-202ENST00000561976 MCEMP1Q8IX19 187 aa11.76□□□□□ -0.53
VPS9D1-202ENST00000561976 BEND2Q8NDZ0 799 aa11.76□□□□□ -0.53
VPS9D1-202ENST00000561976 DTD1Q8TEA8 209 aa11.76□□□□□ -0.53
VPS9D1-202ENST00000561976 ZDHHC16Q969W1 377 aa11.76□□□□□ -0.53
VPS9D1-202ENST00000561976 RTL8AQ9BWD3 113 aa11.76□□□□□ -0.53
VPS9D1-202ENST00000561976 NPCDR1Q9BY65 106 aa11.76□□□□□ -0.53
VPS9D1-202ENST00000561976 KCNIP1Q9NZI2 227 aa11.76□□□□□ -0.53
VPS9D1-202ENST00000561976 NTN3O00634 580 aaPredicted RBP11.76□□□□□ -0.53
VPS9D1-202ENST00000561976 SCGB1D1O95968 90 aa11.76□□□□□ -0.53
VPS9D1-202ENST00000561976 PDGFBP01127 241 aaPredicted RBP11.76□□□□□ -0.53
VPS9D1-202ENST00000561976 CRYAAP02489 173 aa11.76□□□□□ -0.53
VPS9D1-202ENST00000561976 EGR1P18146 543 aa11.76□□□□□ -0.53
VPS9D1-202ENST00000561976 CLDN18P56856 261 aa11.76□□□□□ -0.53
VPS9D1-202ENST00000561976 IQCJQ1A5X6 159 aa11.76□□□□□ -0.53
VPS9D1-202ENST00000561976 SCCPDHQ8NBX0 429 aa11.76□□□□□ -0.53
VPS9D1-202ENST00000561976 PILRBQ9UKJ0 227 aa11.76□□□□□ -0.53
VPS9D1-202ENST00000561976 A0A0U1RQK1 487 aa11.75□□□□□ -0.53
VPS9D1-202ENST00000561976 ZNF320A2RRD8 509 aa11.75□□□□□ -0.53
VPS9D1-202ENST00000561976 SH2D1BO14796 132 aa11.75□□□□□ -0.53
VPS9D1-202ENST00000561976 GALR2O43603 387 aaPredicted RBP11.75□□□□□ -0.53
VPS9D1-202ENST00000561976 S1PR2O95136 353 aa11.75□□□□□ -0.53
VPS9D1-202ENST00000561976 VENTXO95231 258 aa11.75□□□□□ -0.53
VPS9D1-202ENST00000561976 MT-CO3P00414 261 aa11.75□□□□□ -0.53
VPS9D1-202ENST00000561976 SERPINA7P05543 415 aa11.75□□□□□ -0.53
VPS9D1-202ENST00000561976 CCKARP32238 428 aa11.75□□□□□ -0.53
VPS9D1-202ENST00000561976 UBE2G2P60604 165 aa11.75□□□□□ -0.53
VPS9D1-202ENST00000561976 SPCS3P61009 180 aa11.75□□□□□ -0.53
VPS9D1-202ENST00000561976 CST9LP1Q5W188 147 aa11.75□□□□□ -0.53
VPS9D1-202ENST00000561976 ZNF645Q8N7E2 425 aa11.75□□□□□ -0.53
VPS9D1-202ENST00000561976 THOC3Q96J01 351 aaKnown RBP11.75□□□□□ -0.53
VPS9D1-202ENST00000561976 C12orf49Q9H741 205 aa11.75□□□□□ -0.53
VPS9D1-202ENST00000561976 B4GALT7Q9UBV7 327 aa11.75□□□□□ -0.53
VPS9D1-202ENST00000561976 DOCK11Q5JSL3 2073 aa11.75□□□□□ -0.53
VPS9D1-202ENST00000561976 FREM2Q5SZK8 3169 aa11.75□□□□□ -0.53
VPS9D1-202ENST00000561976 CDIPTO14735 213 aa11.75□□□□□ -0.53
VPS9D1-202ENST00000561976 MPLP40238 635 aa11.75□□□□□ -0.53
VPS9D1-202ENST00000561976 OR3A1P47881 315 aa11.75□□□□□ -0.53
VPS9D1-202ENST00000561976 CDC34P49427 236 aaPredicted RBP11.75□□□□□ -0.53
VPS9D1-202ENST00000561976 RPL30P62888 115 aaKnown RBP11.75□□□□□ -0.53
VPS9D1-202ENST00000561976 NUFIP2Q7Z417 695 aaKnown RBP11.75□□□□□ -0.53
VPS9D1-202ENST00000561976 OR2M7Q8NG81 312 aa11.75□□□□□ -0.53
VPS9D1-202ENST00000561976 OR1L1Q8NH94 360 aa11.75□□□□□ -0.53
VPS9D1-202ENST00000561976 HES7Q9BYE0 225 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms