RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 ABHD14BQ96IU4 210 aa8.83□□□□□ -1
GTF3C1-202ENST00000561623 SF3B5Q9BWJ5 86 aaKnown RBP8.83□□□□□ -1
GTF3C1-202ENST00000561623 SAP30LQ9HAJ7 183 aa8.83□□□□□ -1
GTF3C1-202ENST00000561623 SRSF3P84103 164 aaKnown RBP8.83□□□□□ -1
GTF3C1-202ENST00000561623 ZNF788Q6ZQV5 615 aa8.83□□□□□ -1
GTF3C1-202ENST00000561623 PGLYRP4Q96LB8 373 aa8.83□□□□□ -1
GTF3C1-202ENST00000561623 P2RX4Q99571 388 aa8.83□□□□□ -1
GTF3C1-202ENST00000561623 PRR33A8MZF0 331 aa8.83□□□□□ -1
GTF3C1-202ENST00000561623 F2RL2O00254 374 aa8.83□□□□□ -1
GTF3C1-202ENST00000561623 LDLRAD4O15165 306 aa8.83□□□□□ -1
GTF3C1-202ENST00000561623 GNG7O60262 68 aa8.83□□□□□ -1
GTF3C1-202ENST00000561623 LEPROTL1O95214 131 aa8.83□□□□□ -1
GTF3C1-202ENST00000561623 CD8AP01732 235 aa8.83□□□□□ -1
GTF3C1-202ENST00000561623 ZNF708P17019 499 aa8.83□□□□□ -1
GTF3C1-202ENST00000561623 SLC25A34Q6PIV7 304 aa8.83□□□□□ -1
GTF3C1-202ENST00000561623 SNRNP40Q96DI7 357 aaKnown RBP8.83□□□□□ -1
GTF3C1-202ENST00000561623 PGLYRP1O75594 196 aaPredicted RBP8.83□□□□□ -1
GTF3C1-202ENST00000561623 MT-ND6P03923 174 aa8.83□□□□□ -1
GTF3C1-202ENST00000561623 C1orf100Q5SVJ3 147 aa8.83□□□□□ -1
GTF3C1-202ENST00000561623 OR1L1Q8NH94 360 aa8.83□□□□□ -1
GTF3C1-202ENST00000561623 SPSB2Q99619 263 aa8.83□□□□□ -1
GTF3C1-202ENST00000561623 PCOLCE2Q9UKZ9 415 aa8.83□□□□□ -1
GTF3C1-202ENST00000561623 ARFGEF1Q9Y6D6 1849 aa8.83□□□□□ -1
GTF3C1-202ENST00000561623 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.82□□□□□ -1
GTF3C1-202ENST00000561623 FOXS1O43638 330 aa8.82□□□□□ -1
GTF3C1-202ENST00000561623 DLX1P56177 255 aa8.82□□□□□ -1
GTF3C1-202ENST00000561623 ERVFRD-1P60508 538 aa8.82□□□□□ -1
GTF3C1-202ENST00000561623 KRTCAP3Q53RY4 240 aa8.82□□□□□ -1
GTF3C1-202ENST00000561623 C3orf56Q8N813 242 aa8.82□□□□□ -1
GTF3C1-202ENST00000561623 COA4Q9NYJ1 87 aa8.82□□□□□ -1
GTF3C1-202ENST00000561623 IGKV3-7A0A075B6H7 116 aa8.82□□□□□ -1
GTF3C1-202ENST00000561623 C4orf51C9J302 202 aa8.82□□□□□ -1
GTF3C1-202ENST00000561623 DXOO77932 396 aaKnown RBP8.82□□□□□ -1
GTF3C1-202ENST00000561623 HBZP02008 142 aa8.82□□□□□ -1
GTF3C1-202ENST00000561623 ARL14EPLP0DKL9 152 aa8.82□□□□□ -1
GTF3C1-202ENST00000561623 MAGEA5P43359 124 aa8.82□□□□□ -1
GTF3C1-202ENST00000561623 EIF4EBP2Q13542 120 aaPredicted RBP8.82□□□□□ -1
GTF3C1-202ENST00000561623 VSTM2AQ8TAG5 236 aa8.82□□□□□ -1
GTF3C1-202ENST00000561623 ZNF502Q8TBZ5 544 aa8.82□□□□□ -1
GTF3C1-202ENST00000561623 WNT10AQ9GZT5 417 aa8.82□□□□□ -1
GTF3C1-202ENST00000561623 AUP1Q9Y679 476 aa8.82□□□□□ -1
GTF3C1-202ENST00000561623 PAPPA2Q9BXP8 1791 aa8.82□□□□□ -1
GTF3C1-202ENST00000561623 M0R3E3 92 aa8.82□□□□□ -1
GTF3C1-202ENST00000561623 KLF7O75840 302 aaPredicted RBP8.82□□□□□ -1
GTF3C1-202ENST00000561623 PRRX1P54821 245 aa8.82□□□□□ -1
GTF3C1-202ENST00000561623 COL10A1Q03692 680 aa8.82□□□□□ -1
GTF3C1-202ENST00000561623 NPVFQ9HCQ7 196 aa8.82□□□□□ -1
GTF3C1-202ENST00000561623 WIPI2Q9Y4P8 454 aa8.82□□□□□ -1
GTF3C1-202ENST00000561623 ZIC3O60481 467 aa8.82□□□□□ -1
GTF3C1-202ENST00000561623 BTF3P20290 206 aaKnown RBP8.82□□□□□ -1
GTF3C1-202ENST00000561623 CBLN1P23435 193 aa8.82□□□□□ -1
GTF3C1-202ENST00000561623 CSRP3P50461 194 aa8.82□□□□□ -1
GTF3C1-202ENST00000561623 RHBDD2Q6NTF9 364 aa8.82□□□□□ -1
GTF3C1-202ENST00000561623 SLC25A40Q8TBP6 338 aa8.82□□□□□ -1
GTF3C1-202ENST00000561623 OR2J1Q9GZK6 312 aa8.82□□□□□ -1
GTF3C1-202ENST00000561623 SIPA1L3O60292 1781 aaPredicted RBP8.82□□□□□ -1
GTF3C1-202ENST00000561623 LOC101059948A0A1B0GTJ6 334 aa8.82□□□□□ -1
GTF3C1-202ENST00000561623 ERASQ7Z444 233 aa8.82□□□□□ -1
GTF3C1-202ENST00000561623 ZBTB34Q8NCN2 500 aa8.82□□□□□ -1
GTF3C1-202ENST00000561623 ADAMTSL1Q8N6G6 1762 aa8.82□□□□□ -1
GTF3C1-202ENST00000561623 IL11RAQ14626 422 aa8.82□□□□□ -1
GTF3C1-202ENST00000561623 GABRG3Q99928 467 aa8.82□□□□□ -1
GTF3C1-202ENST00000561623 IGLV1-36A0A0B4J1U3 117 aa8.81□□□□□ -1
GTF3C1-202ENST00000561623 KBTBD11O94819 623 aa8.81□□□□□ -1
GTF3C1-202ENST00000561623 HLA-DQA1P01909 254 aa8.81□□□□□ -1
GTF3C1-202ENST00000561623 QTRT1Q9BXR0 403 aaKnown RBP8.81□□□□□ -1
GTF3C1-202ENST00000561623 GZMHP20718 246 aa8.81□□□□□ -1
GTF3C1-202ENST00000561623 TMEM187Q14656 261 aa8.81□□□□□ -1
GTF3C1-202ENST00000561623 SGK494Q96LW2 274 aa8.81□□□□□ -1
GTF3C1-202ENST00000561623 NEU1Q99519 415 aa8.81□□□□□ -1
GTF3C1-202ENST00000561623 LTBP4Q8N2S1 1624 aa8.81□□□□□ -1
GTF3C1-202ENST00000561623 ROM1Q03395 351 aa8.81□□□□□ -1
GTF3C1-202ENST00000561623 C14orf144Q96I85 54 aa8.81□□□□□ -1
GTF3C1-202ENST00000561623 TUBGCP6Q96RT7 1819 aa8.81□□□□□ -1
GTF3C1-202ENST00000561623 DOCK5Q9H7D0 1870 aa8.81□□□□□ -1
GTF3C1-202ENST00000561623 AREGP15514 252 aa8.81□□□□□ -1
GTF3C1-202ENST00000561623 GAB4Q2WGN9 574 aa8.81□□□□□ -1
GTF3C1-202ENST00000561623 LINC00596Q86U02 117 aa8.81□□□□□ -1
GTF3C1-202ENST00000561623 ABCA3Q99758 1704 aa8.81□□□□□ -1
GTF3C1-202ENST00000561623 OR1N2Q8NGR9 330 aa8.81□□□□□ -1
GTF3C1-202ENST00000561623 SLC25A33Q9BSK2 321 aa8.81□□□□□ -1
GTF3C1-202ENST00000561623 TRAV14DV4A0A0A6YYC5 116 aa8.8□□□□□ -1
GTF3C1-202ENST00000561623 ISG15P05161 165 aa8.8□□□□□ -1
GTF3C1-202ENST00000561623 RPS11P62280 158 aaKnown RBP eCLIP8.8□□□□□ -1
GTF3C1-202ENST00000561623 PSG4Q00888 419 aa8.8□□□□□ -1
GTF3C1-202ENST00000561623 UNC119Q13432 240 aa8.8□□□□□ -1
GTF3C1-202ENST00000561623 OR2Y1Q8NGV0 311 aa8.8□□□□□ -1
GTF3C1-202ENST00000561623 ST6GALNAC6Q969X2 333 aa8.8□□□□□ -1
GTF3C1-202ENST00000561623 SFRP2Q96HF1 295 aa8.8□□□□□ -1
GTF3C1-202ENST00000561623 FAM206AQ9NX38 181 aa8.8□□□□□ -1
GTF3C1-202ENST00000561623 THYN1Q9P016 225 aa8.8□□□□□ -1
GTF3C1-202ENST00000561623 DOCK1Q14185 1865 aa8.8□□□□□ -1
GTF3C1-202ENST00000561623 ZNFX1Q9P2E3 1918 aaKnown RBP8.8□□□□□ -1
GTF3C1-202ENST00000561623 A0A0U1RQV5 110 aa8.8□□□□□ -1
GTF3C1-202ENST00000561623 RAMP1O60894 148 aa8.8□□□□□ -1
GTF3C1-202ENST00000561623 FOLR2P14207 255 aa8.8□□□□□ -1
GTF3C1-202ENST00000561623 SNAI3Q3KNW1 292 aa8.8□□□□□ -1
GTF3C1-202ENST00000561623 CADM4Q8NFZ8 388 aa8.8□□□□□ -1
GTF3C1-202ENST00000561623 ZNF418Q8TF45 676 aaPredicted RBP8.8□□□□□ -1
GTF3C1-202ENST00000561623 SPAG8Q99932 426 aaPredicted RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms