RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 PF4V1P10720 104 aa16.21■□□□□ 0.19
TPM1-232ENST00000561425 SDC2P34741 201 aa16.21■□□□□ 0.19
TPM1-232ENST00000561425 KIR2DS1Q14954 304 aa16.21■□□□□ 0.19
TPM1-232ENST00000561425 ARL6IP1Q15041 203 aa16.21■□□□□ 0.19
TPM1-232ENST00000561425 C5orf64Q2M2E5 130 aa16.21■□□□□ 0.19
TPM1-232ENST00000561425 ETV3LQ6ZN32 361 aa16.21■□□□□ 0.19
TPM1-232ENST00000561425 ZNF107Q9UII5 783 aaPredicted RBP16.21■□□□□ 0.19
TPM1-232ENST00000561425 NOL3O60936 208 aaKnown RBP16.2■□□□□ 0.18
TPM1-232ENST00000561425 ELANEP08246 267 aa16.2■□□□□ 0.18
TPM1-232ENST00000561425 SCAND1P57086 179 aa16.2■□□□□ 0.18
TPM1-232ENST00000561425 FOXE3Q13461 319 aa16.2■□□□□ 0.18
TPM1-232ENST00000561425 IGSF11Q5DX21 431 aa16.2■□□□□ 0.18
TPM1-232ENST00000561425 SFXN4Q6P4A7 337 aa16.2■□□□□ 0.18
TPM1-232ENST00000561425 FAM131AQ6UXB0 335 aa16.2■□□□□ 0.18
TPM1-232ENST00000561425 CLVS1Q8IUQ0 354 aaPredicted RBP16.2■□□□□ 0.18
TPM1-232ENST00000561425 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.2■□□□□ 0.18
TPM1-232ENST00000561425 ATG5Q9H1Y0 275 aa16.2■□□□□ 0.18
TPM1-232ENST00000561425 PRKDCP78527 4128 aaKnown RBP16.19■□□□□ 0.18
TPM1-232ENST00000561425 IGHV7-81A0A0B4J1V7 117 aa16.19■□□□□ 0.18
TPM1-232ENST00000561425 RBBP9O75884 186 aa16.19■□□□□ 0.18
TPM1-232ENST00000561425 PPIFP30405 207 aaKnown RBP16.19■□□□□ 0.18
TPM1-232ENST00000561425 THBS3P49746 956 aa16.19■□□□□ 0.18
TPM1-232ENST00000561425 MRPS15P82914 257 aaKnown RBP16.19■□□□□ 0.18
TPM1-232ENST00000561425 LIN54Q6MZP7 749 aa16.19■□□□□ 0.18
TPM1-232ENST00000561425 GLDNQ6ZMI3 551 aaPredicted RBP16.19■□□□□ 0.18
TPM1-232ENST00000561425 C18orf65Q6ZTR6 163 aa16.19■□□□□ 0.18
TPM1-232ENST00000561425 ANKRD13BQ86YJ7 626 aa16.19■□□□□ 0.18
TPM1-232ENST00000561425 LINC00482Q8N8I6 264 aa16.19■□□□□ 0.18
TPM1-232ENST00000561425 CENPOQ9BU64 300 aa16.19■□□□□ 0.18
TPM1-232ENST00000561425 OR51J1Q9H342 316 aa16.19■□□□□ 0.18
TPM1-232ENST00000561425 RNF167Q9H6Y7 350 aa16.19■□□□□ 0.18
TPM1-232ENST00000561425 ZNF230Q9UIE0 474 aaPredicted RBP16.19■□□□□ 0.18
TPM1-232ENST00000561425 DAPK2Q9UIK4 370 aa16.19■□□□□ 0.18
TPM1-232ENST00000561425 ELF5Q9UKW6 265 aaPredicted RBP16.19■□□□□ 0.18
TPM1-232ENST00000561425 RNF150Q9ULK6 438 aa16.19■□□□□ 0.18
TPM1-232ENST00000561425 WASHC3Q9Y3C0 194 aa16.19■□□□□ 0.18
TPM1-232ENST00000561425 NOTCH3Q9UM47 2321 aa16.18■□□□□ 0.18
TPM1-232ENST00000561425 IGKV1D-8A0A087WSZ0 117 aa16.18■□□□□ 0.18
TPM1-232ENST00000561425 CLEC2LP0C7M8 214 aa16.18■□□□□ 0.18
TPM1-232ENST00000561425 CD33P20138 364 aa16.18■□□□□ 0.18
TPM1-232ENST00000561425 DTYMKP23919 212 aa16.18■□□□□ 0.18
TPM1-232ENST00000561425 PSMB8P28062 276 aa16.18■□□□□ 0.18
TPM1-232ENST00000561425 CDX1P47902 265 aaPredicted RBP16.18■□□□□ 0.18
TPM1-232ENST00000561425 LSM3P62310 102 aaKnown RBP16.18■□□□□ 0.18
TPM1-232ENST00000561425 CDNFQ49AH0 187 aa16.18■□□□□ 0.18
TPM1-232ENST00000561425 HACD4Q5VWC8 232 aa16.18■□□□□ 0.18
TPM1-232ENST00000561425 ZNF383Q8NA42 475 aa16.18■□□□□ 0.18
TPM1-232ENST00000561425 MYOZ3Q8TDC0 251 aa16.18■□□□□ 0.18
TPM1-232ENST00000561425 P2RX4Q99571 388 aa16.18■□□□□ 0.18
TPM1-232ENST00000561425 RRHO14718 337 aa16.17■□□□□ 0.18
TPM1-232ENST00000561425 TMEM127O75204 238 aa16.17■□□□□ 0.18
TPM1-232ENST00000561425 SCGNO76038 276 aa16.17■□□□□ 0.18
TPM1-232ENST00000561425 GABARAPO95166 117 aa16.17■□□□□ 0.18
TPM1-232ENST00000561425 PF4P02776 101 aa16.17■□□□□ 0.18
TPM1-232ENST00000561425 OR5H8P0DN80 308 aa16.17■□□□□ 0.18
TPM1-232ENST00000561425 SNRPBP14678 240 aaKnown RBP16.17■□□□□ 0.18
TPM1-232ENST00000561425 MYCNOSP40205 109 aa16.17■□□□□ 0.18
TPM1-232ENST00000561425 CRIP2P52943 208 aaPredicted RBP16.17■□□□□ 0.18
TPM1-232ENST00000561425 ZNF260Q3ZCT1 412 aa16.17■□□□□ 0.18
TPM1-232ENST00000561425 C19orf54Q5BKX5 351 aa16.17■□□□□ 0.18
TPM1-232ENST00000561425 KHDC1LQ5JSQ8 128 aa16.17■□□□□ 0.18
TPM1-232ENST00000561425 ZNF695Q8IW36 515 aa16.17■□□□□ 0.18
TPM1-232ENST00000561425 MRPL41Q8IXM3 137 aaKnown RBP16.17■□□□□ 0.18
TPM1-232ENST00000561425 OR10J5Q8NHC4 309 aa16.17■□□□□ 0.18
TPM1-232ENST00000561425 NAA50Q9GZZ1 169 aaKnown RBP16.17■□□□□ 0.18
TPM1-232ENST00000561425 ZNF221Q9UK13 617 aa16.17■□□□□ 0.18
TPM1-232ENST00000561425 A0A075B6Q4 140 aa16.16■□□□□ 0.18
TPM1-232ENST00000561425 CCDC160A6NGH7 325 aa16.16■□□□□ 0.18
TPM1-232ENST00000561425 RPLP1P05386 114 aaKnown RBP16.16■□□□□ 0.18
TPM1-232ENST00000561425 GSTP1P09211 210 aaKnown RBP16.16■□□□□ 0.18
TPM1-232ENST00000561425 IGLL1P15814 213 aa16.16■□□□□ 0.18
TPM1-232ENST00000561425 VDAC1P21796 283 aa16.16■□□□□ 0.18
TPM1-232ENST00000561425 LINC00205P59089 165 aa16.16■□□□□ 0.18
TPM1-232ENST00000561425 ARFRP1Q13795 201 aa16.16■□□□□ 0.18
TPM1-232ENST00000561425 KIAA0141Q14154 515 aaPredicted RBP16.16■□□□□ 0.18
TPM1-232ENST00000561425 ZNF660Q6AZW8 331 aaPredicted RBP16.16■□□□□ 0.18
TPM1-232ENST00000561425 LGALS14Q8TCE9 139 aa16.16■□□□□ 0.18
TPM1-232ENST00000561425 MAFIPQ8WZ33 124 aa16.16■□□□□ 0.18
TPM1-232ENST00000561425 RCC1LQ96I51 464 aaKnown RBP16.16■□□□□ 0.18
TPM1-232ENST00000561425 DCSTAMPQ9H295 470 aa16.16■□□□□ 0.18
TPM1-232ENST00000561425 BET1O15155 118 aa16.15■□□□□ 0.18
TPM1-232ENST00000561425 DUS4LO95620 317 aaKnown RBP16.15■□□□□ 0.18
TPM1-232ENST00000561425 IGLV1-40P01703 118 aa16.15■□□□□ 0.18
TPM1-232ENST00000561425 TMBIM6P55061 237 aa16.15■□□□□ 0.18
TPM1-232ENST00000561425 CXorf66Q5JRM2 361 aaPredicted RBP16.15■□□□□ 0.18
TPM1-232ENST00000561425 C8orf86Q6ZUL3 223 aa16.15■□□□□ 0.18
TPM1-232ENST00000561425 REC114Q7Z4M0 266 aa16.15■□□□□ 0.18
TPM1-232ENST00000561425 H1FOOQ8IZA3 346 aaPredicted RBP16.15■□□□□ 0.18
TPM1-232ENST00000561425 DRAXINQ8NBI3 349 aaPredicted RBP16.15■□□□□ 0.18
TPM1-232ENST00000561425 MINDY2Q8NBR6 621 aa16.15■□□□□ 0.18
TPM1-232ENST00000561425 RAB2BQ8WUD1 216 aa16.15■□□□□ 0.18
TPM1-232ENST00000561425 SDHAF2Q9NX18 166 aa16.15■□□□□ 0.18
TPM1-232ENST00000561425 KIAA1456Q9P272 454 aa16.15■□□□□ 0.18
TPM1-232ENST00000561425 ETV7Q9Y603 341 aa16.15■□□□□ 0.18
TPM1-232ENST00000561425 G3V318 75 aa16.14■□□□□ 0.17
TPM1-232ENST00000561425 FCN1O00602 326 aa16.14■□□□□ 0.17
TPM1-232ENST00000561425 ATP6V0E1O15342 81 aa16.14■□□□□ 0.17
TPM1-232ENST00000561425 IGKV1-16P04430 117 aa16.14■□□□□ 0.17
TPM1-232ENST00000561425 OR8U9P0C7N5 309 aa16.14■□□□□ 0.17
TPM1-232ENST00000561425 EGR2P11161 476 aaPredicted RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms