RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 ODAMA1E959 279 aa12.21□□□□□ -0.45
CRTC3-210ENST00000560927 C5orf52A6NGY3 159 aa12.21□□□□□ -0.45
CRTC3-210ENST00000560927 ZFP92A6NM28 416 aa12.21□□□□□ -0.45
CRTC3-210ENST00000560927 CGAP01215 116 aa12.21□□□□□ -0.45
CRTC3-210ENST00000560927 TAGLN2P37802 199 aaKnown RBP12.21□□□□□ -0.45
CRTC3-210ENST00000560927 ELLP55199 621 aaPredicted RBP12.21□□□□□ -0.45
CRTC3-210ENST00000560927 RAB2AP61019 212 aa12.21□□□□□ -0.45
CRTC3-210ENST00000560927 DLK1P80370 383 aa12.21□□□□□ -0.45
CRTC3-210ENST00000560927 SLC38A11Q08AI6 406 aa12.21□□□□□ -0.45
CRTC3-210ENST00000560927 TMEM14EPQ6UXP3 125 aa12.21□□□□□ -0.45
CRTC3-210ENST00000560927 ZBTB34Q8NCN2 500 aa12.21□□□□□ -0.45
CRTC3-210ENST00000560927 RCC1LQ96I51 464 aaKnown RBP12.21□□□□□ -0.45
CRTC3-210ENST00000560927 PSMG3Q9BT73 122 aaPredicted RBP12.21□□□□□ -0.45
CRTC3-210ENST00000560927 CLN8Q9UBY8 286 aa12.21□□□□□ -0.45
CRTC3-210ENST00000560927 CHD3Q12873 2000 aaKnown RBP12.21□□□□□ -0.46
CRTC3-210ENST00000560927 LINC00473A8K010 186 aa12.2□□□□□ -0.46
CRTC3-210ENST00000560927 FAM90A26D6RGX4 464 aa12.2□□□□□ -0.46
CRTC3-210ENST00000560927 ST8SIA5O15466 376 aa12.2□□□□□ -0.46
CRTC3-210ENST00000560927 IFNA4P05014 189 aa12.2□□□□□ -0.46
CRTC3-210ENST00000560927 KHDC3LQ587J8 217 aa12.2□□□□□ -0.46
CRTC3-210ENST00000560927 ZNF787Q6DD87 383 aa12.2□□□□□ -0.46
CRTC3-210ENST00000560927 FAM180AQ6UWF9 173 aa12.2□□□□□ -0.46
CRTC3-210ENST00000560927 LRP11Q86VZ4 500 aa12.2□□□□□ -0.46
CRTC3-210ENST00000560927 LRRC29Q8WV35 223 aa12.2□□□□□ -0.46
CRTC3-210ENST00000560927 MUCL1Q96DR8 90 aa12.2□□□□□ -0.46
CRTC3-210ENST00000560927 TOLLIPQ9H0E2 274 aa12.2□□□□□ -0.46
CRTC3-210ENST00000560927 LRRC30A6NM36 301 aa12.2□□□□□ -0.46
CRTC3-210ENST00000560927 GALR2O43603 387 aaPredicted RBP12.2□□□□□ -0.46
CRTC3-210ENST00000560927 EGR1P18146 543 aa12.2□□□□□ -0.46
CRTC3-210ENST00000560927 RPS16P62249 146 aaKnown RBP12.2□□□□□ -0.46
CRTC3-210ENST00000560927 EDDM3AQ14507 147 aa12.2□□□□□ -0.46
CRTC3-210ENST00000560927 LTC4SQ16873 150 aa12.2□□□□□ -0.46
CRTC3-210ENST00000560927 SMIM21Q3B7S5 101 aa12.2□□□□□ -0.46
CRTC3-210ENST00000560927 MBNL2Q5VZF2 373 aaKnown RBP12.2□□□□□ -0.46
CRTC3-210ENST00000560927 OR2Z1Q8NG97 314 aa12.2□□□□□ -0.46
CRTC3-210ENST00000560927 ZDHHC16Q969W1 377 aa12.2□□□□□ -0.46
CRTC3-210ENST00000560927 PLPPR2Q96GM1 343 aa12.2□□□□□ -0.46
CRTC3-210ENST00000560927 PROCRQ9UNN8 238 aa12.2□□□□□ -0.46
CRTC3-210ENST00000560927 S100A6P06703 90 aa12.19□□□□□ -0.46
CRTC3-210ENST00000560927 ZNF343Q6P1L6 599 aa12.19□□□□□ -0.46
CRTC3-210ENST00000560927 BHLHA15Q7RTS1 189 aaPredicted RBP12.19□□□□□ -0.46
CRTC3-210ENST00000560927 MBD3L1Q8WWY6 194 aa12.19□□□□□ -0.46
CRTC3-210ENST00000560927 TAF15Q92804 592 aaKnown RBP eCLIP12.19□□□□□ -0.46
CRTC3-210ENST00000560927 PSG11Q9UQ72 335 aa12.19□□□□□ -0.46
CRTC3-210ENST00000560927 ZG16O60844 167 aa12.19□□□□□ -0.46
CRTC3-210ENST00000560927 IGKV1D-33P01593 117 aa12.19□□□□□ -0.46
CRTC3-210ENST00000560927 IGKV1-33P01594 117 aa12.19□□□□□ -0.46
CRTC3-210ENST00000560927 OR8U8P0C7N1 319 aa12.19□□□□□ -0.46
CRTC3-210ENST00000560927 CATR1Q13166 79 aa12.19□□□□□ -0.46
CRTC3-210ENST00000560927 Q3ZCU0 254 aa12.19□□□□□ -0.46
CRTC3-210ENST00000560927 SPRNQ5BIV9 151 aa12.19□□□□□ -0.46
CRTC3-210ENST00000560927 SPINK9Q5DT21 86 aa12.19□□□□□ -0.46
CRTC3-210ENST00000560927 HEPN1Q6WQI6 88 aa12.19□□□□□ -0.46
CRTC3-210ENST00000560927 NIPSNAP3BQ9BS92 247 aa12.19□□□□□ -0.46
CRTC3-210ENST00000560927 AGMATQ9BSE5 352 aa12.19□□□□□ -0.46
CRTC3-210ENST00000560927 HEATR1Q9H583 2144 aaKnown RBP12.19□□□□□ -0.46
CRTC3-210ENST00000560927 AHRRA9YTQ3 701 aa12.18□□□□□ -0.46
CRTC3-210ENST00000560927 C15orf65H3BRN8 121 aa12.18□□□□□ -0.46
CRTC3-210ENST00000560927 IFNL4K9M1U5 179 aa12.18□□□□□ -0.46
CRTC3-210ENST00000560927 BCL2P10415 239 aa12.18□□□□□ -0.46
CRTC3-210ENST00000560927 MAS1LP35410 378 aa12.18□□□□□ -0.46
CRTC3-210ENST00000560927 MEOX2P50222 304 aa12.18□□□□□ -0.46
CRTC3-210ENST00000560927 RAB11AP62491 216 aa12.18□□□□□ -0.46
CRTC3-210ENST00000560927 SERF2P84101 59 aa12.18□□□□□ -0.46
CRTC3-210ENST00000560927 TMEM41BQ5BJD5 291 aa12.18□□□□□ -0.46
CRTC3-210ENST00000560927 FAM90A2PQ658T7 463 aa12.18□□□□□ -0.46
CRTC3-210ENST00000560927 RBMS3Q6XE24 437 aaKnown RBP12.18□□□□□ -0.46
CRTC3-210ENST00000560927 TVP23CQ96ET8 276 aa12.18□□□□□ -0.46
CRTC3-210ENST00000560927 LURAP1Q96LR2 239 aa12.18□□□□□ -0.46
CRTC3-210ENST00000560927 DUSP13Q9UII6 198 aa12.18□□□□□ -0.46
CRTC3-210ENST00000560927 SLC25A15Q9Y619 301 aa12.18□□□□□ -0.46
CRTC3-210ENST00000560927 PRDX2P32119 198 aa12.18□□□□□ -0.46
CRTC3-210ENST00000560927 MSMO1Q15800 293 aa12.18□□□□□ -0.46
CRTC3-210ENST00000560927 BEND4Q6ZU67 534 aa12.18□□□□□ -0.46
CRTC3-210ENST00000560927 RPRMLQ8N4K4 120 aa12.18□□□□□ -0.46
CRTC3-210ENST00000560927 MALSU1Q96EH3 234 aa12.18□□□□□ -0.46
CRTC3-210ENST00000560927 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.18□□□□□ -0.46
CRTC3-210ENST00000560927 DOCK11Q5JSL3 2073 aa12.17□□□□□ -0.46
CRTC3-210ENST00000560927 IGKV1D-17A0A075B6S4 117 aa12.17□□□□□ -0.46
CRTC3-210ENST00000560927 UBE2CO00762 179 aa12.17□□□□□ -0.46
CRTC3-210ENST00000560927 ZNF737O75373 536 aa12.17□□□□□ -0.46
CRTC3-210ENST00000560927 TUBG1P23258 451 aa12.17□□□□□ -0.46
CRTC3-210ENST00000560927 ZNF83P51522 516 aa12.17□□□□□ -0.46
CRTC3-210ENST00000560927 FABP9Q0Z7S8 132 aa12.17□□□□□ -0.46
CRTC3-210ENST00000560927 P2RY6Q15077 328 aa12.17□□□□□ -0.46
CRTC3-210ENST00000560927 RPP25LQ8N5L8 163 aaKnown RBP12.17□□□□□ -0.46
CRTC3-210ENST00000560927 PARD6GQ9BYG4 376 aaPredicted RBP12.17□□□□□ -0.46
CRTC3-210ENST00000560927 TUBG2Q9NRH3 451 aa12.17□□□□□ -0.46
CRTC3-210ENST00000560927 CISD1Q9NZ45 108 aaKnown RBP12.17□□□□□ -0.46
CRTC3-210ENST00000560927 URGCP-MRPS24S4R325 110 aa12.17□□□□□ -0.46
CRTC3-210ENST00000560927 CADP27708 2225 aa12.17□□□□□ -0.46
CRTC3-210ENST00000560927 IGHV3OR15-7A0A075B7D8 119 aa12.17□□□□□ -0.46
CRTC3-210ENST00000560927 A0A1B0GWJ7 208 aa12.17□□□□□ -0.46
CRTC3-210ENST00000560927 PMS2P5A8MQ11 134 aa12.17□□□□□ -0.46
CRTC3-210ENST00000560927 PROP1O75360 226 aa12.17□□□□□ -0.46
CRTC3-210ENST00000560927 CLDN14O95500 239 aa12.17□□□□□ -0.46
CRTC3-210ENST00000560927 DTD1Q8TEA8 209 aa12.17□□□□□ -0.46
CRTC3-210ENST00000560927 Q8WTZ3 238 aa12.17□□□□□ -0.46
CRTC3-210ENST00000560927 A0A087WWC5 75 aa12.16□□□□□ -0.46
CRTC3-210ENST00000560927 MAP1LC3B2A6NCE7 125 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms