RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 FAM3DQ96BQ1 224 aa7.67□□□□□ -1.18
TPM1-225ENST00000560679 RBMXL1Q96E39 390 aaKnown RBP7.67□□□□□ -1.18
TPM1-225ENST00000560679 EAF1Q96JC9 268 aaPredicted RBP7.67□□□□□ -1.18
TPM1-225ENST00000560679 CHST5Q9GZS9 411 aa7.67□□□□□ -1.18
TPM1-225ENST00000560679 PLSCR3Q9NRY6 295 aa7.67□□□□□ -1.18
TPM1-225ENST00000560679 C19orf73Q9NVV2 129 aa7.67□□□□□ -1.18
TPM1-225ENST00000560679 COPZ2Q9P299 210 aa7.67□□□□□ -1.18
TPM1-225ENST00000560679 AMMECR1Q9Y4X0 333 aaPredicted RBP7.67□□□□□ -1.18
TPM1-225ENST00000560679 NUBP2Q9Y5Y2 271 aa7.67□□□□□ -1.18
TPM1-225ENST00000560679 IGHV3-72A0A0B4J1Y9 119 aa7.66□□□□□ -1.18
TPM1-225ENST00000560679 IGKV1-12A0A0C4DH73 117 aa7.66□□□□□ -1.18
TPM1-225ENST00000560679 NAP1L6A6NFF2 107 aa7.66□□□□□ -1.18
TPM1-225ENST00000560679 ZNF729A6NN14 1252 aaPredicted RBP7.66□□□□□ -1.18
TPM1-225ENST00000560679 XRCC3O43542 346 aa7.66□□□□□ -1.18
TPM1-225ENST00000560679 IGKV1D-12P01611 117 aa7.66□□□□□ -1.18
TPM1-225ENST00000560679 CSN2P05814 226 aa7.66□□□□□ -1.18
TPM1-225ENST00000560679 GSTT2BP0CG30 244 aa7.66□□□□□ -1.18
TPM1-225ENST00000560679 POU3F4P49335 361 aa7.66□□□□□ -1.18
TPM1-225ENST00000560679 RAB7AP51149 207 aa7.66□□□□□ -1.18
TPM1-225ENST00000560679 FUT6P51993 359 aa7.66□□□□□ -1.18
TPM1-225ENST00000560679 ATXN7L3Q14CW9 347 aaPredicted RBP7.66□□□□□ -1.18
TPM1-225ENST00000560679 C1orf100Q5SVJ3 147 aa7.66□□□□□ -1.18
TPM1-225ENST00000560679 HAPLN4Q86UW8 402 aa7.66□□□□□ -1.18
TPM1-225ENST00000560679 SERPINA12Q8IW75 414 aa7.66□□□□□ -1.18
TPM1-225ENST00000560679 Q8N1Y9 231 aa7.66□□□□□ -1.18
TPM1-225ENST00000560679 OR1N2Q8NGR9 330 aa7.66□□□□□ -1.18
TPM1-225ENST00000560679 OR52I2Q8NH67 350 aa7.66□□□□□ -1.18
TPM1-225ENST00000560679 ST6GAL2Q96JF0 529 aa7.66□□□□□ -1.18
TPM1-225ENST00000560679 OR5B12Q96R08 314 aa7.66□□□□□ -1.18
TPM1-225ENST00000560679 GON7Q9BXV9 100 aa7.66□□□□□ -1.18
TPM1-225ENST00000560679 KLK15Q9H2R5 256 aa7.66□□□□□ -1.18
TPM1-225ENST00000560679 ING3Q9NXR8 418 aa7.66□□□□□ -1.18
TPM1-225ENST00000560679 PSG11Q9UQ72 335 aa7.66□□□□□ -1.18
TPM1-225ENST00000560679 RBMX2Q9Y388 322 aaKnown RBP7.66□□□□□ -1.18
TPM1-225ENST00000560679 VPS13DQ5THJ4 4388 aa7.65□□□□□ -1.18
TPM1-225ENST00000560679 IGKV1-9A0A0C4DH69 117 aa7.65□□□□□ -1.18
TPM1-225ENST00000560679 KBTBD11-OT1A0A1B0GTJ5 212 aa7.65□□□□□ -1.18
TPM1-225ENST00000560679 NCBP2LA6PVI3 153 aaKnown RBP7.65□□□□□ -1.18
TPM1-225ENST00000560679 OVOL1O14753 267 aa7.65□□□□□ -1.18
TPM1-225ENST00000560679 HSD17B6O14756 317 aa7.65□□□□□ -1.18
TPM1-225ENST00000560679 SYT7O43581 403 aa7.65□□□□□ -1.18
TPM1-225ENST00000560679 DHFRP00374 187 aa7.65□□□□□ -1.18
TPM1-225ENST00000560679 MT-ND4P03905 459 aa7.65□□□□□ -1.18
TPM1-225ENST00000560679 ARSBP15848 533 aa7.65□□□□□ -1.18
TPM1-225ENST00000560679 ZNF20P17024 532 aa7.65□□□□□ -1.18
TPM1-225ENST00000560679 VDAC1P21796 283 aa7.65□□□□□ -1.18
TPM1-225ENST00000560679 HTR2CP28335 458 aa7.65□□□□□ -1.18
TPM1-225ENST00000560679 GLP1RP43220 463 aa7.65□□□□□ -1.18
TPM1-225ENST00000560679 REG1BP48304 166 aa7.65□□□□□ -1.18
TPM1-225ENST00000560679 GNG10P50151 68 aa7.65□□□□□ -1.18
TPM1-225ENST00000560679 ZNF816Q0VGE8 651 aaPredicted RBP7.65□□□□□ -1.18
TPM1-225ENST00000560679 PLA2G7Q13093 441 aa7.65□□□□□ -1.18
TPM1-225ENST00000560679 KRBOX4Q5JUW0 171 aa7.65□□□□□ -1.18
TPM1-225ENST00000560679 Q6P435 159 aa7.65□□□□□ -1.18
TPM1-225ENST00000560679 ZNF491Q8N8L2 437 aa7.65□□□□□ -1.18
TPM1-225ENST00000560679 OR13A1Q8NGR1 328 aa7.65□□□□□ -1.18
TPM1-225ENST00000560679 FCAMRQ8WWV6 532 aa7.65□□□□□ -1.18
TPM1-225ENST00000560679 DLX4Q92988 240 aaPredicted RBP7.65□□□□□ -1.18
TPM1-225ENST00000560679 BORCS8Q96FH0 119 aa7.65□□□□□ -1.18
TPM1-225ENST00000560679 UBE2E2Q96LR5 201 aa7.65□□□□□ -1.18
TPM1-225ENST00000560679 SPATA25Q9BR10 227 aa7.65□□□□□ -1.18
TPM1-225ENST00000560679 ALX4Q9H161 411 aaPredicted RBP7.65□□□□□ -1.18
TPM1-225ENST00000560679 DIABLOQ9NR28 239 aa7.65□□□□□ -1.18
TPM1-225ENST00000560679 CALYQ9NYX4 217 aa7.65□□□□□ -1.18
TPM1-225ENST00000560679 KIAA1456Q9P272 454 aa7.65□□□□□ -1.18
TPM1-225ENST00000560679 GLS2Q9UI32 602 aa7.65□□□□□ -1.18
TPM1-225ENST00000560679 A0A0A6YYH2 397 aa7.64□□□□□ -1.19
TPM1-225ENST00000560679 IGHV1-3A0A0C4DH29 117 aa7.64□□□□□ -1.19
TPM1-225ENST00000560679 TMEM272A0A1B0GTI8 110 aa7.64□□□□□ -1.19
TPM1-225ENST00000560679 A0A1W2PPE3 182 aa7.64□□□□□ -1.19
TPM1-225ENST00000560679 ANKRD20A5PA0PJZ0 165 aa7.64□□□□□ -1.19
TPM1-225ENST00000560679 C7orf66A4D0T2 115 aa7.64□□□□□ -1.19
TPM1-225ENST00000560679 A6NJ64 397 aa7.64□□□□□ -1.19
TPM1-225ENST00000560679 A8MZ25 164 aa7.64□□□□□ -1.19
TPM1-225ENST00000560679 SLC33A1O00400 549 aaPredicted RBP7.64□□□□□ -1.19
TPM1-225ENST00000560679 TCRBP04435 133 aa7.64□□□□□ -1.19
TPM1-225ENST00000560679 IGF1P05019 195 aa7.64□□□□□ -1.19
TPM1-225ENST00000560679 PPIFP30405 207 aaKnown RBP7.64□□□□□ -1.19
TPM1-225ENST00000560679 BDKRB2P30411 391 aa7.64□□□□□ -1.19
TPM1-225ENST00000560679 SLURP1P55000 103 aa7.64□□□□□ -1.19
TPM1-225ENST00000560679 RRAS2P62070 204 aaPredicted RBP7.64□□□□□ -1.19
TPM1-225ENST00000560679 C2orf76Q3KRA6 126 aa7.64□□□□□ -1.19
TPM1-225ENST00000560679 ZFP69Q49AA0 526 aa7.64□□□□□ -1.19
TPM1-225ENST00000560679 ACSM6Q6P461 480 aa7.64□□□□□ -1.19
TPM1-225ENST00000560679 LYPD6Q86Y78 171 aa7.64□□□□□ -1.19
TPM1-225ENST00000560679 JAGN1Q8N5M9 183 aa7.64□□□□□ -1.19
TPM1-225ENST00000560679 TMEM104Q8NE00 496 aa7.64□□□□□ -1.19
TPM1-225ENST00000560679 OR51A2Q8NGJ7 313 aa7.64□□□□□ -1.19
TPM1-225ENST00000560679 DEDD2Q8WXF8 326 aa7.64□□□□□ -1.19
TPM1-225ENST00000560679 ARPC1AQ92747 370 aa7.64□□□□□ -1.19
TPM1-225ENST00000560679 PTX4Q96A99 478 aa7.64□□□□□ -1.19
TPM1-225ENST00000560679 FGGYQ96C11 551 aa7.64□□□□□ -1.19
TPM1-225ENST00000560679 S1PR3Q99500 378 aa7.64□□□□□ -1.19
TPM1-225ENST00000560679 LINC00574Q9H8X3 128 aa7.64□□□□□ -1.19
TPM1-225ENST00000560679 NEK6Q9HC98 313 aa7.64□□□□□ -1.19
TPM1-225ENST00000560679 HRASLSQ9HDD0 168 aa7.64□□□□□ -1.19
TPM1-225ENST00000560679 NUDT15Q9NV35 164 aa7.64□□□□□ -1.19
TPM1-225ENST00000560679 IDI2-AS1Q9NZ38 188 aa7.64□□□□□ -1.19
TPM1-225ENST00000560679 ZNF580Q9UK33 172 aa7.64□□□□□ -1.19
TPM1-225ENST00000560679 VSIG4Q9Y279 399 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms