RNA–Protein interactions for RNA: ENST00000560532.1

SLTM-223, Transcript of SAFB like transcription modulator, human

TSL 4

Gene SLTM, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLTM-223	ENST00000560532	CLVS2	Q5SYC1	327 aa		0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	SYPL2	Q5VXT5	272 aa		0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	TRIQK	Q629K1	86 aa		0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	LAMTOR1	Q6IAA8	161 aa		0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	C3orf33	Q6P1S2	294 aa		0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	CD200R1L	Q6Q8B3	271 aa		0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	ASCL4	Q6XD76	172 aa		0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	SLC36A1	Q7Z2H8	476 aa		0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	TAC4	Q86UU9	113 aa		0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	TRAPPC5	Q8IUR0	188 aa		0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	LRRC34	Q8IZ02	419 aa		0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	SELENOH	Q8IZQ5	122 aa	Known RBP	0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	RIBC1	Q8N443	379 aa	Predicted RBP	0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	OR8G5	Q8NG78	346 aa		0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	GPR32P1	Q8NGA4	272 aa		0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	OR10P1	Q8NGE3	313 aa		0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	OR5D18	Q8NGL1	313 aa		0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	OR4C16	Q8NGL9	310 aa		0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	MCFD2	Q8NI22	146 aa		0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	DYNC2LI1	Q8TCX1	351 aa		0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	EEF1AKMT1	Q8WVE0	214 aa		0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	NELFB	Q8WX92	580 aa		0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	BORCS7	Q96B45	105 aa		0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	TESC	Q96BS2	214 aa		0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	ZNF707	Q96C28	371 aa	Predicted RBP	0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	ZHX1-C8orf76	Q96EF9	292 aa		0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	FMC1	Q96HJ9	113 aa		0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	ZNF625	Q96I27	306 aa	Predicted RBP	0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	CPB2	Q96IY4	423 aa		0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	KCTD7	Q96MP8	289 aa		0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	NIPSNAP1	Q9BPW8	284 aa		0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	UTP23	Q9BRU9	249 aa	Known RBP	0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	DDA1	Q9BW61	102 aa		0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	EBPL	Q9BY08	206 aa		0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	POTEKP	Q9BYX7	375 aa		0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	ARL6	Q9H0F7	186 aa		0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	METTL9	Q9H1A3	318 aa		0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	BOLA2	Q9H3K6	86 aa		0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	TMBIM4	Q9HC24	238 aa		0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	ACOT13	Q9NPJ3	140 aa		0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	XPNPEP1	Q9NQW7	623 aa		0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	C8orf4	Q9NR00	106 aa		0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	VPS29	Q9UBQ0	182 aa		0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	SLC23A2	Q9UGH3	650 aa		0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	C3orf18	Q9UK00	162 aa		0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	NXT1	Q9UKK6	140 aa	Known RBP	0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	FBXO5	Q9UKT4	447 aa		0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	GUCA1B	Q9UMX6	200 aa		0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	ANGPT4	Q9Y264	503 aa		0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	COL6A6	A6NMZ7	2263 aa		0.78	□□□□□ -2.28
SLTM-223	ENST00000560532		A0A1W2PP64	1363 aa		0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	TONSL	Q96HA7	1378 aa		0.78	□□□□□ -2.28
SLTM-223	ENST00000560532	ATRN	O75882	1429 aa		0.78	□□□□□ -2.28
SLTM-223	ENST00000560532		A0A1B0GV72	72 aa		0.77	□□□□□ -2.29
SLTM-223	ENST00000560532	GNG14	A0A1W2PPG7	69 aa		0.77	□□□□□ -2.29
SLTM-223	ENST00000560532		A0A1W2PQL4	384 aa	Predicted RBP	0.77	□□□□□ -2.29
SLTM-223	ENST00000560532	CCDC160	A6NGH7	325 aa		0.77	□□□□□ -2.29
SLTM-223	ENST00000560532	EFCAB9	A8MZ26	197 aa		0.77	□□□□□ -2.29
SLTM-223	ENST00000560532	DISC1	C4P0D8	188 aa		0.77	□□□□□ -2.29
SLTM-223	ENST00000560532		I3L4J1	428 aa		0.77	□□□□□ -2.29
SLTM-223	ENST00000560532		M0QZ92	97 aa		0.77	□□□□□ -2.29
SLTM-223	ENST00000560532		M0QZK8	103 aa		0.77	□□□□□ -2.29
SLTM-223	ENST00000560532	AIP	O00170	330 aa		0.77	□□□□□ -2.29
SLTM-223	ENST00000560532	PGRMC1	O00264	195 aa	Known RBP	0.77	□□□□□ -2.29
SLTM-223	ENST00000560532	KPNA3	O00505	521 aa	Predicted RBP	0.77	□□□□□ -2.29
SLTM-223	ENST00000560532	ATP8B1	O43520	1251 aa		0.77	□□□□□ -2.29
SLTM-223	ENST00000560532	CHP2	O43745	196 aa		0.77	□□□□□ -2.29
SLTM-223	ENST00000560532	POP7	O75817	140 aa	Known RBP	0.77	□□□□□ -2.29
SLTM-223	ENST00000560532	SC5D	O75845	299 aa		0.77	□□□□□ -2.29
SLTM-223	ENST00000560532	PIAS1	O75925	651 aa		0.77	□□□□□ -2.29
SLTM-223	ENST00000560532	CIAO1	O76071	339 aa		0.77	□□□□□ -2.29
SLTM-223	ENST00000560532	GADD45G	O95257	159 aa		0.77	□□□□□ -2.29
SLTM-223	ENST00000560532	GP1BA	P07359	652 aa		0.77	□□□□□ -2.29
SLTM-223	ENST00000560532	LIMS3	P0CW19	117 aa		0.77	□□□□□ -2.29
SLTM-223	ENST00000560532	LIMS4	P0CW20	117 aa		0.77	□□□□□ -2.29
SLTM-223	ENST00000560532	OR12D1	P0DN82	309 aa		0.77	□□□□□ -2.29
SLTM-223	ENST00000560532	HIST1H1E	P10412	219 aa	Known RBP	0.77	□□□□□ -2.29
SLTM-223	ENST00000560532	SCGB1A1	P11684	91 aa		0.77	□□□□□ -2.29
SLTM-223	ENST00000560532	ALOX5AP	P20292	161 aa		0.77	□□□□□ -2.29
SLTM-223	ENST00000560532	HIST1H1T	P22492	207 aa	Predicted RBP	0.77	□□□□□ -2.29
SLTM-223	ENST00000560532	PSMA1	P25786	263 aa	Known RBP	0.77	□□□□□ -2.29
SLTM-223	ENST00000560532	AGTR1	P30556	359 aa		0.77	□□□□□ -2.29
SLTM-223	ENST00000560532	RCVRN	P35243	200 aa		0.77	□□□□□ -2.29
SLTM-223	ENST00000560532	CAPZB	P47756	277 aa		0.77	□□□□□ -2.29
SLTM-223	ENST00000560532	SRP9	P49458	86 aa	Known RBP	0.77	□□□□□ -2.29
SLTM-223	ENST00000560532	KRTAP10-4	P60372	401 aa	Predicted RBP	0.77	□□□□□ -2.29
SLTM-223	ENST00000560532	ACTB	P60709	375 aa		0.77	□□□□□ -2.29
SLTM-223	ENST00000560532	CXCR4	P61073	352 aa		0.77	□□□□□ -2.29
SLTM-223	ENST00000560532	ACTG1	P63261	375 aa		0.77	□□□□□ -2.29
SLTM-223	ENST00000560532	BTN3A2	P78410	334 aa		0.77	□□□□□ -2.29
SLTM-223	ENST00000560532	RPL19	P84098	196 aa	Known RBP	0.77	□□□□□ -2.29
SLTM-223	ENST00000560532	GTF2B	Q00403	316 aa		0.77	□□□□□ -2.29
SLTM-223	ENST00000560532	BAX	Q07812	192 aa		0.77	□□□□□ -2.29
SLTM-223	ENST00000560532	DYNC1I2	Q13409	638 aa	Known RBP	0.77	□□□□□ -2.29
SLTM-223	ENST00000560532	MMD	Q15546	238 aa		0.77	□□□□□ -2.29
SLTM-223	ENST00000560532	TRAM1	Q15629	374 aa		0.77	□□□□□ -2.29
SLTM-223	ENST00000560532	TSN	Q15631	228 aa	Known RBP	0.77	□□□□□ -2.29
SLTM-223	ENST00000560532	TBC1D28	Q2M2D7	210 aa		0.77	□□□□□ -2.29
SLTM-223	ENST00000560532	DEFB115	Q30KQ5	88 aa		0.77	□□□□□ -2.29

Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms