RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 METTL21CQ5VZV1 264 aa4.48□□□□□ -1.69
HERC1-208ENST00000560462 CGB2Q6NT52 195 aa4.48□□□□□ -1.69
HERC1-208ENST00000560462 ZNF343Q6P1L6 599 aa4.48□□□□□ -1.69
HERC1-208ENST00000560462 C8orf82Q6P1X6 216 aaPredicted RBP4.48□□□□□ -1.69
HERC1-208ENST00000560462 ERICH5Q6P6B1 374 aa4.48□□□□□ -1.69
HERC1-208ENST00000560462 UNQ5815/PRO19632Q6UWF5 114 aa4.48□□□□□ -1.69
HERC1-208ENST00000560462 CD164L2Q6UWJ8 174 aa4.48□□□□□ -1.69
HERC1-208ENST00000560462 OR8J3Q8NGG0 315 aa4.48□□□□□ -1.69
HERC1-208ENST00000560462 OR51A7Q8NH64 312 aa4.48□□□□□ -1.69
HERC1-208ENST00000560462 TMEM239Q8WW34 195 aa4.48□□□□□ -1.69
HERC1-208ENST00000560462 CACNG8Q8WXS5 425 aa4.48□□□□□ -1.69
HERC1-208ENST00000560462 ASB9Q96DX5 294 aa4.48□□□□□ -1.69
HERC1-208ENST00000560462 PRRC1Q96M27 445 aa4.48□□□□□ -1.69
HERC1-208ENST00000560462 SPAG8Q99932 426 aaPredicted RBP4.48□□□□□ -1.69
HERC1-208ENST00000560462 SH3GL1Q99961 368 aa4.48□□□□□ -1.69
HERC1-208ENST00000560462 COPS4Q9BT78 406 aa4.48□□□□□ -1.69
HERC1-208ENST00000560462 KRTAP1-5Q9BYS1 174 aa4.48□□□□□ -1.69
HERC1-208ENST00000560462 ANKRD60Q9BZ19 345 aa4.48□□□□□ -1.69
HERC1-208ENST00000560462 POLR2J2Q9GZM3 115 aaKnown RBP4.48□□□□□ -1.69
HERC1-208ENST00000560462 NSRP1Q9H0G5 558 aaKnown RBP4.48□□□□□ -1.69
HERC1-208ENST00000560462 POLR2J3Q9H1A7 115 aaKnown RBP4.48□□□□□ -1.69
HERC1-208ENST00000560462 FGFR1OP2Q9NVK5 253 aa4.48□□□□□ -1.69
HERC1-208ENST00000560462 POLDIP2Q9Y2S7 368 aa4.48□□□□□ -1.69
HERC1-208ENST00000560462 RRP15Q9Y3B9 282 aaKnown RBP4.48□□□□□ -1.69
HERC1-208ENST00000560462 OR5B21A6NL26 309 aa4.47□□□□□ -1.69
HERC1-208ENST00000560462 J3QT63 122 aa4.47□□□□□ -1.69
HERC1-208ENST00000560462 ARPC2O15144 300 aa4.47□□□□□ -1.69
HERC1-208ENST00000560462 S1PR2O95136 353 aa4.47□□□□□ -1.69
HERC1-208ENST00000560462 DIRAS3O95661 229 aa4.47□□□□□ -1.69
HERC1-208ENST00000560462 AADACP22760 399 aa4.47□□□□□ -1.69
HERC1-208ENST00000560462 IFNA8P32881 189 aa4.47□□□□□ -1.69
HERC1-208ENST00000560462 PDZK1IP1Q13113 114 aa4.47□□□□□ -1.69
HERC1-208ENST00000560462 KRR1Q13601 381 aaKnown RBP4.47□□□□□ -1.69
HERC1-208ENST00000560462 C5orf64Q2M2E5 130 aa4.47□□□□□ -1.69
HERC1-208ENST00000560462 ODF3L2Q3SX64 289 aa4.47□□□□□ -1.69
HERC1-208ENST00000560462 AKIRIN2Q53H80 203 aa4.47□□□□□ -1.69
HERC1-208ENST00000560462 CYBRD1Q53TN4 286 aa4.47□□□□□ -1.69
HERC1-208ENST00000560462 LCE1DQ5T752 114 aa4.47□□□□□ -1.69
HERC1-208ENST00000560462 SLX4IPQ5VYV7 408 aa4.47□□□□□ -1.69
HERC1-208ENST00000560462 SLC25A24Q6NUK1 477 aa4.47□□□□□ -1.69
HERC1-208ENST00000560462 DNM1P34Q6PK57 102 aa4.47□□□□□ -1.69
HERC1-208ENST00000560462 PPP1R27Q86WC6 154 aa4.47□□□□□ -1.69
HERC1-208ENST00000560462 OR2T12Q8NG77 320 aa4.47□□□□□ -1.69
HERC1-208ENST00000560462 OR5A2Q8NGI9 324 aa4.47□□□□□ -1.69
HERC1-208ENST00000560462 RTN4IP1Q8WWV3 396 aaPredicted RBP4.47□□□□□ -1.69
HERC1-208ENST00000560462 THRSPQ92748 146 aa4.47□□□□□ -1.69
HERC1-208ENST00000560462 EMG1Q92979 244 aaKnown RBP4.47□□□□□ -1.69
HERC1-208ENST00000560462 TPD52L3Q96J77 140 aa4.47□□□□□ -1.69
HERC1-208ENST00000560462 RDH12Q96NR8 316 aa4.47□□□□□ -1.69
HERC1-208ENST00000560462 RIBC2Q9H4K1 309 aa4.47□□□□□ -1.69
HERC1-208ENST00000560462 NMNAT1Q9HAN9 279 aaPredicted RBP4.47□□□□□ -1.69
HERC1-208ENST00000560462 SAR1AQ9NR31 198 aa4.47□□□□□ -1.69
HERC1-208ENST00000560462 MLXQ9UH92 298 aa4.47□□□□□ -1.69
HERC1-208ENST00000560462 RIMS3Q9UJD0 308 aa4.47□□□□□ -1.69
HERC1-208ENST00000560462 ZNF221Q9UK13 617 aa4.47□□□□□ -1.69
HERC1-208ENST00000560462 MED31Q9Y3C7 131 aa4.47□□□□□ -1.69
HERC1-208ENST00000560462 TRAV27A0A087WT01 109 aa4.46□□□□□ -1.7
HERC1-208ENST00000560462 TRAV25A0A0B4J276 109 aa4.46□□□□□ -1.7
HERC1-208ENST00000560462 A0A1B0GW64 132 aa4.46□□□□□ -1.7
HERC1-208ENST00000560462 FUOMA2VDF0 154 aa4.46□□□□□ -1.7
HERC1-208ENST00000560462 ZNF729A6NN14 1252 aaPredicted RBP4.46□□□□□ -1.7
HERC1-208ENST00000560462 E9PI62 339 aa4.46□□□□□ -1.7
HERC1-208ENST00000560462 DCTN6O00399 190 aa4.46□□□□□ -1.7
HERC1-208ENST00000560462 NPPAP01160 153 aa4.46□□□□□ -1.7
HERC1-208ENST00000560462 SEMG1P04279 462 aa4.46□□□□□ -1.7
HERC1-208ENST00000560462 KRT8P05787 483 aa4.46□□□□□ -1.7
HERC1-208ENST00000560462 CD14P08571 375 aa4.46□□□□□ -1.7
HERC1-208ENST00000560462 IFI30P13284 250 aa4.46□□□□□ -1.7
HERC1-208ENST00000560462 MYOD1P15172 320 aa4.46□□□□□ -1.7
HERC1-208ENST00000560462 CRABP1P29762 137 aa4.46□□□□□ -1.7
HERC1-208ENST00000560462 KDELR2P33947 212 aa4.46□□□□□ -1.7
HERC1-208ENST00000560462 HAAOP46952 286 aa4.46□□□□□ -1.7
HERC1-208ENST00000560462 SSTP61278 116 aa4.46□□□□□ -1.7
HERC1-208ENST00000560462 ZNF415Q09FC8 603 aa4.46□□□□□ -1.7
HERC1-208ENST00000560462 ST3GAL3Q11203 375 aa4.46□□□□□ -1.7
HERC1-208ENST00000560462 ODF4Q2M2E3 257 aa4.46□□□□□ -1.7
HERC1-208ENST00000560462 SLC22A6Q4U2R8 563 aa4.46□□□□□ -1.7
HERC1-208ENST00000560462 FAM122BQ7Z309 247 aa4.46□□□□□ -1.7
HERC1-208ENST00000560462 ARPINQ7Z6K5 226 aa4.46□□□□□ -1.7
HERC1-208ENST00000560462 MMD2Q8IY49 270 aa4.46□□□□□ -1.7
HERC1-208ENST00000560462 MICU2Q8IYU8 434 aa4.46□□□□□ -1.7
HERC1-208ENST00000560462 OFCC1Q8IZS5 231 aa4.46□□□□□ -1.7
HERC1-208ENST00000560462 LFNGQ8NES3 379 aa4.46□□□□□ -1.7
HERC1-208ENST00000560462 GGHQ92820 318 aa4.46□□□□□ -1.7
HERC1-208ENST00000560462 FAM46BQ96A09 425 aa4.46□□□□□ -1.7
HERC1-208ENST00000560462 BPIFA2Q96DR5 249 aa4.46□□□□□ -1.7
HERC1-208ENST00000560462 PARP12Q9H0J9 701 aaKnown RBP4.46□□□□□ -1.7
HERC1-208ENST00000560462 RGCCQ9H4X1 137 aa4.46□□□□□ -1.7
HERC1-208ENST00000560462 GID8Q9NWU2 228 aa4.46□□□□□ -1.7
HERC1-208ENST00000560462 TRAV18A0A075B6X5 111 aa4.45□□□□□ -1.7
HERC1-208ENST00000560462 KBTBD11-OT1A0A1B0GTJ5 212 aa4.45□□□□□ -1.7
HERC1-208ENST00000560462 A0A1W2PPE3 182 aa4.45□□□□□ -1.7
HERC1-208ENST00000560462 LOC110117498-PIK3R3F6TDL0 507 aa4.45□□□□□ -1.7
HERC1-208ENST00000560462 H3BUA1 57 aa4.45□□□□□ -1.7
HERC1-208ENST00000560462 NME4O00746 187 aa4.45□□□□□ -1.7
HERC1-208ENST00000560462 NBR2O15453 112 aa4.45□□□□□ -1.7
HERC1-208ENST00000560462 ZNF682O95780 498 aa4.45□□□□□ -1.7
HERC1-208ENST00000560462 HAND1O96004 215 aa4.45□□□□□ -1.7
HERC1-208ENST00000560462 MAP2K4P45985 399 aa4.45□□□□□ -1.7
HERC1-208ENST00000560462 YAP1P46937 504 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms