RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 NCR3LG1Q68D85 454 aa8.96□□□□□ -0.98
SNRPA1-211ENST00000560433 TRAT1Q6PIZ9 186 aa8.96□□□□□ -0.98
SNRPA1-211ENST00000560433 SPAG16Q8N0X2 631 aa8.96□□□□□ -0.98
SNRPA1-211ENST00000560433 OR4D5Q8NGN0 318 aa8.96□□□□□ -0.98
SNRPA1-211ENST00000560433 PLEKHF2Q9H8W4 249 aa8.96□□□□□ -0.98
SNRPA1-211ENST00000560433 JPT1Q9UK76 154 aa8.96□□□□□ -0.98
SNRPA1-211ENST00000560433 SSSCA1O60232 199 aa8.95□□□□□ -0.98
SNRPA1-211ENST00000560433 YPEL1O60688 119 aa8.95□□□□□ -0.98
SNRPA1-211ENST00000560433 S1PR2O95136 353 aa8.95□□□□□ -0.98
SNRPA1-211ENST00000560433 LRRC10Q5BKY1 277 aa8.95□□□□□ -0.98
SNRPA1-211ENST00000560433 C11orf71Q6IPW1 123 aa8.95□□□□□ -0.98
SNRPA1-211ENST00000560433 LYG1Q8N1E2 194 aa8.95□□□□□ -0.98
SNRPA1-211ENST00000560433 YPEL2Q96QA6 119 aa8.95□□□□□ -0.98
SNRPA1-211ENST00000560433 IFI27L2Q9H2X8 130 aa8.95□□□□□ -0.98
SNRPA1-211ENST00000560433 SEBOXQ9HB31 216 aaPredicted RBP8.95□□□□□ -0.98
SNRPA1-211ENST00000560433 GFOD1Q9NXC2 390 aa8.95□□□□□ -0.98
SNRPA1-211ENST00000560433 LRRK2Q5S007 2527 aa8.95□□□□□ -0.98
SNRPA1-211ENST00000560433 A0A0D9SG52 128 aa8.95□□□□□ -0.98
SNRPA1-211ENST00000560433 hADV38S2A0JD32 116 aa8.95□□□□□ -0.98
SNRPA1-211ENST00000560433 M0R1X1 148 aa8.95□□□□□ -0.98
SNRPA1-211ENST00000560433 PPIHO43447 177 aaKnown RBP8.95□□□□□ -0.98
SNRPA1-211ENST00000560433 OR2F2O95006 317 aa8.95□□□□□ -0.98
SNRPA1-211ENST00000560433 HKR1P10072 659 aa8.95□□□□□ -0.98
SNRPA1-211ENST00000560433 TAGLNQ01995 201 aaKnown RBP8.95□□□□□ -0.98
SNRPA1-211ENST00000560433 EIF4EBP1Q13541 118 aaPredicted RBP8.95□□□□□ -0.98
SNRPA1-211ENST00000560433 OR2F1Q13607 317 aa8.95□□□□□ -0.98
SNRPA1-211ENST00000560433 SMCO1Q147U7 214 aa8.95□□□□□ -0.98
SNRPA1-211ENST00000560433 SSX9Q7RTT3 188 aa8.95□□□□□ -0.98
SNRPA1-211ENST00000560433 VKORC1L1Q8N0U8 176 aa8.95□□□□□ -0.98
SNRPA1-211ENST00000560433 ABHD14AQ9BUJ0 271 aa8.95□□□□□ -0.98
SNRPA1-211ENST00000560433 RAB1BQ9H0U4 201 aa8.95□□□□□ -0.98
SNRPA1-211ENST00000560433 LIN7CQ9NUP9 197 aaKnown RBP8.95□□□□□ -0.98
SNRPA1-211ENST00000560433 IDI2-AS1Q9NZ38 188 aa8.95□□□□□ -0.98
SNRPA1-211ENST00000560433 CACNG5Q9UF02 275 aa8.95□□□□□ -0.98
SNRPA1-211ENST00000560433 NSG2Q9Y328 171 aa8.95□□□□□ -0.98
SNRPA1-211ENST00000560433 SAA2-SAA4A0A096LPE2 208 aa8.94□□□□□ -0.98
SNRPA1-211ENST00000560433 H3BP45 60 aa8.94□□□□□ -0.98
SNRPA1-211ENST00000560433 FCGR3BO75015 233 aa8.94□□□□□ -0.98
SNRPA1-211ENST00000560433 C1QL1O75973 258 aa8.94□□□□□ -0.98
SNRPA1-211ENST00000560433 SAA2P0DJI9 122 aaPredicted RBP8.94□□□□□ -0.98
SNRPA1-211ENST00000560433 DAOP14920 347 aa8.94□□□□□ -0.98
SNRPA1-211ENST00000560433 RPL12P30050 165 aaKnown RBP8.94□□□□□ -0.98
SNRPA1-211ENST00000560433 NKX2-1P43699 371 aaPredicted RBP8.94□□□□□ -0.98
SNRPA1-211ENST00000560433 PPOXP50336 477 aa8.94□□□□□ -0.98
SNRPA1-211ENST00000560433 SRPXP78539 464 aa8.94□□□□□ -0.98
SNRPA1-211ENST00000560433 NHLH2Q02577 135 aa8.94□□□□□ -0.98
SNRPA1-211ENST00000560433 ZNF767PQ75MW2 155 aa8.94□□□□□ -0.98
SNRPA1-211ENST00000560433 ZNF843Q8N446 348 aa8.94□□□□□ -0.98
SNRPA1-211ENST00000560433 DMBX1Q8NFW5 382 aa8.94□□□□□ -0.98
SNRPA1-211ENST00000560433 EDARADDQ8WWZ3 215 aa8.94□□□□□ -0.98
SNRPA1-211ENST00000560433 ST8SIA2Q92186 375 aa8.94□□□□□ -0.98
SNRPA1-211ENST00000560433 TOLLIPQ9H0E2 274 aa8.94□□□□□ -0.98
SNRPA1-211ENST00000560433 UBQLN2Q9UHD9 624 aa8.94□□□□□ -0.98
SNRPA1-211ENST00000560433 ST8SIA3O43173 380 aa8.94□□□□□ -0.98
SNRPA1-211ENST00000560433 BCL2L11O43521 198 aa8.94□□□□□ -0.98
SNRPA1-211ENST00000560433 IFNA7P01567 189 aa8.94□□□□□ -0.98
SNRPA1-211ENST00000560433 PET100P0DJ07 73 aa8.94□□□□□ -0.98
SNRPA1-211ENST00000560433 ZNF345Q14585 488 aa8.94□□□□□ -0.98
SNRPA1-211ENST00000560433 THOC7Q6I9Y2 204 aaKnown RBP8.94□□□□□ -0.98
SNRPA1-211ENST00000560433 ZNF714Q96N38 554 aa8.94□□□□□ -0.98
SNRPA1-211ENST00000560433 LINC00312Q9Y6C7 94 aa8.94□□□□□ -0.98
SNRPA1-211ENST00000560433 FAM24AA6NFZ4 105 aa8.93□□□□□ -0.98
SNRPA1-211ENST00000560433 ZNF729A6NN14 1252 aaPredicted RBP8.93□□□□□ -0.98
SNRPA1-211ENST00000560433 TMEM50AO95807 157 aa8.93□□□□□ -0.98
SNRPA1-211ENST00000560433 LYL1P12980 280 aa8.93□□□□□ -0.98
SNRPA1-211ENST00000560433 C4BPBP20851 252 aa8.93□□□□□ -0.98
SNRPA1-211ENST00000560433 DUTP33316 252 aaKnown RBP8.93□□□□□ -0.98
SNRPA1-211ENST00000560433 REG1BP48304 166 aa8.93□□□□□ -0.98
SNRPA1-211ENST00000560433 CAV2P51636 162 aa8.93□□□□□ -0.98
SNRPA1-211ENST00000560433 SPINK9Q5DT21 86 aa8.93□□□□□ -0.98
SNRPA1-211ENST00000560433 SLC51BQ86UW2 128 aa8.93□□□□□ -0.98
SNRPA1-211ENST00000560433 ODF3L1Q8IXM7 274 aa8.93□□□□□ -0.98
SNRPA1-211ENST00000560433 CITED4Q96RK1 184 aa8.93□□□□□ -0.98
SNRPA1-211ENST00000560433 ARPC5LQ9BPX5 153 aa8.93□□□□□ -0.98
SNRPA1-211ENST00000560433 WNK2Q9Y3S1 2297 aa8.93□□□□□ -0.98
SNRPA1-211ENST00000560433 WRBO00258 174 aa8.93□□□□□ -0.98
SNRPA1-211ENST00000560433 CHST1O43916 411 aa8.93□□□□□ -0.98
SNRPA1-211ENST00000560433 IGHV2-70P01814 119 aa8.93□□□□□ -0.98
SNRPA1-211ENST00000560433 IAPPP10997 89 aa8.93□□□□□ -0.98
SNRPA1-211ENST00000560433 AGAP20933 346 aa8.93□□□□□ -0.98
SNRPA1-211ENST00000560433 NUP62P37198 522 aaPredicted RBP8.93□□□□□ -0.98
SNRPA1-211ENST00000560433 DIAPH2-AS1Q14236 149 aa8.93□□□□□ -0.98
SNRPA1-211ENST00000560433 CYTL1Q9NRR1 136 aa8.93□□□□□ -0.98
SNRPA1-211ENST00000560433 POMT1Q9Y6A1 747 aa8.93□□□□□ -0.98
SNRPA1-211ENST00000560433 CHD6Q8TD26 2715 aa8.93□□□□□ -0.98
SNRPA1-211ENST00000560433 A6NNC1 897 aa8.92□□□□□ -0.98
SNRPA1-211ENST00000560433 TMEM33P57088 247 aa8.92□□□□□ -0.98
SNRPA1-211ENST00000560433 CATR1Q13166 79 aa8.92□□□□□ -0.98
SNRPA1-211ENST00000560433 RPL7L1Q6DKI1 246 aaKnown RBP8.92□□□□□ -0.98
SNRPA1-211ENST00000560433 ZNF841Q6ZN19 808 aa8.92□□□□□ -0.98
SNRPA1-211ENST00000560433 CORO2AQ92828 525 aa8.92□□□□□ -0.98
SNRPA1-211ENST00000560433 AQP10Q96PS8 301 aa8.92□□□□□ -0.98
SNRPA1-211ENST00000560433 RPUSD1Q9UJJ7 312 aaKnown RBP8.92□□□□□ -0.98
SNRPA1-211ENST00000560433 RPS10-NUDT3A0A1W2PQS6 291 aa8.92□□□□□ -0.98
SNRPA1-211ENST00000560433 A1L4Q6 167 aa8.92□□□□□ -0.98
SNRPA1-211ENST00000560433 IGFBP2P18065 325 aa8.92□□□□□ -0.98
SNRPA1-211ENST00000560433 ZBTB34Q8NCN2 500 aa8.92□□□□□ -0.98
SNRPA1-211ENST00000560433 ZNF439Q8NDP4 499 aa8.92□□□□□ -0.98
SNRPA1-211ENST00000560433 FBXL17Q9UF56 701 aa8.92□□□□□ -0.98
SNRPA1-211ENST00000560433 RNF212BA8MTL3 300 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms