RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 IGKV1-16P04430 117 aa12.48□□□□□ -0.41
HERC1-207ENST00000560316 IGFBP3P17936 291 aaPredicted RBP12.48□□□□□ -0.41
HERC1-207ENST00000560316 AADACP22760 399 aa12.48□□□□□ -0.41
HERC1-207ENST00000560316 RPS16P62249 146 aaKnown RBP12.48□□□□□ -0.41
HERC1-207ENST00000560316 HMGN3Q15651 99 aa12.48□□□□□ -0.41
HERC1-207ENST00000560316 DNAL1Q4LDG9 190 aa12.48□□□□□ -0.41
HERC1-207ENST00000560316 DRAXINQ8NBI3 349 aaPredicted RBP12.48□□□□□ -0.41
HERC1-207ENST00000560316 OR13C5Q8NGS8 318 aa12.48□□□□□ -0.41
HERC1-207ENST00000560316 TINAGL1Q9GZM7 467 aaPredicted RBP12.48□□□□□ -0.41
HERC1-207ENST00000560316 AMBNQ9NP70 447 aa12.48□□□□□ -0.41
HERC1-207ENST00000560316 STEAP1Q9UHE8 339 aa12.48□□□□□ -0.41
HERC1-207ENST00000560316 SAC3D1A6NKF1 404 aa12.47□□□□□ -0.41
HERC1-207ENST00000560316 SNTNA6NMZ2 147 aa12.47□□□□□ -0.41
HERC1-207ENST00000560316 H3BNX3 289 aa12.47□□□□□ -0.41
HERC1-207ENST00000560316 GLAP06280 429 aa12.47□□□□□ -0.41
HERC1-207ENST00000560316 MGMTP16455 207 aa12.47□□□□□ -0.41
HERC1-207ENST00000560316 CPEP16870 476 aa12.47□□□□□ -0.41
HERC1-207ENST00000560316 EDN2P20800 178 aa12.47□□□□□ -0.41
HERC1-207ENST00000560316 LINC00205P59089 165 aa12.47□□□□□ -0.41
HERC1-207ENST00000560316 PJVKQ0ZLH3 352 aa12.47□□□□□ -0.41
HERC1-207ENST00000560316 C6orf141Q5SZD1 244 aa12.47□□□□□ -0.41
HERC1-207ENST00000560316 JAGN1Q8N5M9 183 aa12.47□□□□□ -0.41
HERC1-207ENST00000560316 CCDC197Q8NCU1 140 aa12.47□□□□□ -0.41
HERC1-207ENST00000560316 DYNLRB2Q8TF09 96 aa12.47□□□□□ -0.41
HERC1-207ENST00000560316 TSNAXQ99598 290 aaKnown RBP12.47□□□□□ -0.41
HERC1-207ENST00000560316 AP4S1Q9Y587 144 aa12.47□□□□□ -0.41
HERC1-207ENST00000560316 SELENOKQ9Y6D0 94 aa12.47□□□□□ -0.41
HERC1-207ENST00000560316 TRAV8-7A0A075B6U6 113 aa12.46□□□□□ -0.41
HERC1-207ENST00000560316 FAM90A7PA6NKC0 464 aa12.46□□□□□ -0.41
HERC1-207ENST00000560316 FAM90A23PA8MXZ1 464 aa12.46□□□□□ -0.41
HERC1-207ENST00000560316 AIREO43918 545 aa12.46□□□□□ -0.41
HERC1-207ENST00000560316 PDCD6O75340 191 aa12.46□□□□□ -0.41
HERC1-207ENST00000560316 GPX5O75715 221 aa12.46□□□□□ -0.41
HERC1-207ENST00000560316 CRTAPO75718 401 aaPredicted RBP12.46□□□□□ -0.41
HERC1-207ENST00000560316 APELAP0DMC3 54 aa12.46□□□□□ -0.41
HERC1-207ENST00000560316 DEFB114Q30KQ6 69 aa12.46□□□□□ -0.41
HERC1-207ENST00000560316 ZIK1Q3SY52 487 aaPredicted RBP12.46□□□□□ -0.41
HERC1-207ENST00000560316 AWAT2Q6E213 333 aa12.46□□□□□ -0.41
HERC1-207ENST00000560316 SNAPC3Q92966 411 aa12.46□□□□□ -0.41
HERC1-207ENST00000560316 WDR89Q96FK6 387 aaPredicted RBP12.46□□□□□ -0.41
HERC1-207ENST00000560316 USMG5Q96IX5 58 aa12.46□□□□□ -0.41
HERC1-207ENST00000560316 Q96M66 194 aa12.46□□□□□ -0.41
HERC1-207ENST00000560316 OR14A2Q96R54 314 aa12.46□□□□□ -0.41
HERC1-207ENST00000560316 COA4Q9NYJ1 87 aa12.46□□□□□ -0.41
HERC1-207ENST00000560316 ABRACLQ9P1F3 81 aa12.46□□□□□ -0.41
HERC1-207ENST00000560316 A0A0B4J203 849 aa12.45□□□□□ -0.42
HERC1-207ENST00000560316 BMPR1BO00238 502 aa12.45□□□□□ -0.42
HERC1-207ENST00000560316 SPDEFO95238 335 aa12.45□□□□□ -0.42
HERC1-207ENST00000560316 GABRB1P18505 474 aa12.45□□□□□ -0.42
HERC1-207ENST00000560316 LGALS7P47929 136 aa12.45□□□□□ -0.42
HERC1-207ENST00000560316 RPL22L1Q6P5R6 122 aaKnown RBP12.45□□□□□ -0.42
HERC1-207ENST00000560316 OR52I1Q8NGK6 324 aa12.45□□□□□ -0.42
HERC1-207ENST00000560316 FAM46BQ96A09 425 aa12.45□□□□□ -0.42
HERC1-207ENST00000560316 SLC7A6OSQ96CW6 309 aaPredicted RBP12.45□□□□□ -0.42
HERC1-207ENST00000560316 SULT4A1Q9BR01 284 aa12.45□□□□□ -0.42
HERC1-207ENST00000560316 AGMATQ9BSE5 352 aa12.45□□□□□ -0.42
HERC1-207ENST00000560316 KLK5Q9Y337 293 aaPredicted RBP12.45□□□□□ -0.42
HERC1-207ENST00000560316 LRRC42Q9Y546 428 aa12.45□□□□□ -0.42
HERC1-207ENST00000560316 PROP1O75360 226 aa12.44□□□□□ -0.42
HERC1-207ENST00000560316 LIMS3P0CW19 117 aa12.44□□□□□ -0.42
HERC1-207ENST00000560316 LIMS4P0CW20 117 aa12.44□□□□□ -0.42
HERC1-207ENST00000560316 LYG2Q86SG7 212 aa12.44□□□□□ -0.42
HERC1-207ENST00000560316 ZNF383Q8NA42 475 aa12.44□□□□□ -0.42
HERC1-207ENST00000560316 KCTD12Q96CX2 325 aaKnown RBP12.44□□□□□ -0.42
HERC1-207ENST00000560316 GGTLC1Q9BX51 225 aa12.44□□□□□ -0.42
HERC1-207ENST00000560316 FCGR1AP12314 374 aa12.43□□□□□ -0.42
HERC1-207ENST00000560316 KIR2DS2P43631 304 aa12.43□□□□□ -0.42
HERC1-207ENST00000560316 CCDC58Q4VC31 144 aa12.43□□□□□ -0.42
HERC1-207ENST00000560316 CENPNQ96H22 339 aaPredicted RBP12.43□□□□□ -0.42
HERC1-207ENST00000560316 TMEM68Q96MH6 324 aa12.43□□□□□ -0.42
HERC1-207ENST00000560316 C11orf54Q9H0W9 315 aaPredicted RBP12.43□□□□□ -0.42
HERC1-207ENST00000560316 ZC4H2Q9NQZ6 224 aa12.43□□□□□ -0.42
HERC1-207ENST00000560316 CKLFQ9UBR5 152 aa12.43□□□□□ -0.42
HERC1-207ENST00000560316 LOC102724200A0A096LPH7 203 aaPredicted RBP12.42□□□□□ -0.42
HERC1-207ENST00000560316 TRBV5-5A0A0J9YX44 114 aa12.42□□□□□ -0.42
HERC1-207ENST00000560316 A0A1W2PPK0 400 aa12.42□□□□□ -0.42
HERC1-207ENST00000560316 IGLV2-23P01705 113 aa12.42□□□□□ -0.42
HERC1-207ENST00000560316 FOLR2P14207 255 aa12.42□□□□□ -0.42
HERC1-207ENST00000560316 TNFRSF9Q07011 255 aa12.42□□□□□ -0.42
HERC1-207ENST00000560316 OR2G6Q5TZ20 316 aa12.42□□□□□ -0.42
HERC1-207ENST00000560316 LGALS9CQ6DKI2 356 aa12.42□□□□□ -0.42
HERC1-207ENST00000560316 SETD6Q8TBK2 473 aa12.42□□□□□ -0.42
HERC1-207ENST00000560316 FAAP24Q9BTP7 215 aa12.42□□□□□ -0.42
HERC1-207ENST00000560316 OR1A1Q9P1Q5 309 aa12.42□□□□□ -0.42
HERC1-207ENST00000560316 C2orf70A6NJV1 201 aa12.41□□□□□ -0.42
HERC1-207ENST00000560316 PRH1P02810 166 aa12.41□□□□□ -0.42
HERC1-207ENST00000560316 ALPLP05186 524 aa12.41□□□□□ -0.42
HERC1-207ENST00000560316 CRYGBP07316 175 aa12.41□□□□□ -0.42
HERC1-207ENST00000560316 EXOSC2Q13868 293 aaKnown RBP12.41□□□□□ -0.42
HERC1-207ENST00000560316 SLC16A13Q7RTY0 426 aa12.41□□□□□ -0.42
HERC1-207ENST00000560316 PDPNQ86YL7 162 aa12.41□□□□□ -0.42
HERC1-207ENST00000560316 SVOPQ8N4V2 548 aa12.41□□□□□ -0.42
HERC1-207ENST00000560316 ADAD2Q8NCV1 583 aaKnown RBP12.41□□□□□ -0.42
HERC1-207ENST00000560316 SMIM19Q96E16 107 aa12.41□□□□□ -0.42
HERC1-207ENST00000560316 PHB2Q99623 299 aa12.41□□□□□ -0.42
HERC1-207ENST00000560316 AKIP1Q9NQ31 210 aa12.41□□□□□ -0.42
HERC1-207ENST00000560316 ZNF230Q9UIE0 474 aaPredicted RBP12.41□□□□□ -0.42
HERC1-207ENST00000560316 ORC6Q9Y5N6 252 aa12.41□□□□□ -0.42
HERC1-207ENST00000560316 VPS13DQ5THJ4 4388 aa12.41□□□□□ -0.42
HERC1-207ENST00000560316 MSGN1A6NI15 193 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms