RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 DNAJC4Q9NNZ3 241 aa12.07□□□□□ -0.48
CSPG4P12-202ENST00000559989 hCG_38984A0A1B0GV85 526 aa12.07□□□□□ -0.48
CSPG4P12-202ENST00000559989 NDUFA3O95167 84 aa12.07□□□□□ -0.48
CSPG4P12-202ENST00000559989 LGALS1P09382 135 aaKnown RBP12.07□□□□□ -0.48
CSPG4P12-202ENST00000559989 ASCL4Q6XD76 172 aa12.07□□□□□ -0.48
CSPG4P12-202ENST00000559989 RNASEH2CQ8TDP1 164 aaKnown RBP12.07□□□□□ -0.48
CSPG4P12-202ENST00000559989 G6PC2Q9NQR9 355 aa12.07□□□□□ -0.48
CSPG4P12-202ENST00000559989 TOMM7Q9P0U1 55 aa12.07□□□□□ -0.48
CSPG4P12-202ENST00000559989 DSPPQ9NZW4 1301 aa12.07□□□□□ -0.48
CSPG4P12-202ENST00000559989 LDLRAD4O15165 306 aa12.06□□□□□ -0.48
CSPG4P12-202ENST00000559989 PRR7Q8TB68 274 aa12.06□□□□□ -0.48
CSPG4P12-202ENST00000559989 MZB1Q8WU39 189 aa12.06□□□□□ -0.48
CSPG4P12-202ENST00000559989 CYSLTR1Q9Y271 337 aa12.06□□□□□ -0.48
CSPG4P12-202ENST00000559989 H0Y980 276 aa12.06□□□□□ -0.48
CSPG4P12-202ENST00000559989 PRSS53Q2L4Q9 553 aa12.06□□□□□ -0.48
CSPG4P12-202ENST00000559989 KIF13BQ9NQT8 1826 aa12.06□□□□□ -0.48
CSPG4P12-202ENST00000559989 CDIPTO14735 213 aa12.06□□□□□ -0.48
CSPG4P12-202ENST00000559989 CTLA4P16410 223 aa12.06□□□□□ -0.48
CSPG4P12-202ENST00000559989 GFERP55789 205 aa12.06□□□□□ -0.48
CSPG4P12-202ENST00000559989 FXYD3Q14802 87 aa12.06□□□□□ -0.48
CSPG4P12-202ENST00000559989 C5orf30Q96GV9 206 aa12.06□□□□□ -0.48
CSPG4P12-202ENST00000559989 RPL31P62899 125 aaKnown RBP12.06□□□□□ -0.48
CSPG4P12-202ENST00000559989 PIGYQ3MUY2 71 aa12.06□□□□□ -0.48
CSPG4P12-202ENST00000559989 RPS11P62280 158 aaKnown RBP eCLIP12.06□□□□□ -0.48
CSPG4P12-202ENST00000559989 ZFP64Q9NPA5 681 aa12.06□□□□□ -0.48
CSPG4P12-202ENST00000559989 UNQ9370/PRO34162Q6UXP9 181 aa12.06□□□□□ -0.48
CSPG4P12-202ENST00000559989 EEF1AKMT3Q96AZ1 226 aa12.06□□□□□ -0.48
CSPG4P12-202ENST00000559989 MRPL32Q9BYC8 188 aaKnown RBP12.06□□□□□ -0.48
CSPG4P12-202ENST00000559989 EIF3GO75821 320 aaKnown RBP eCLIP12.05□□□□□ -0.48
CSPG4P12-202ENST00000559989 CD300LDQ6UXZ3 194 aa12.05□□□□□ -0.48
CSPG4P12-202ENST00000559989 CITED1Q99966 193 aa12.05□□□□□ -0.48
CSPG4P12-202ENST00000559989 MAST2Q6P0Q8 1798 aa12.05□□□□□ -0.48
CSPG4P12-202ENST00000559989 MDC1Q14676 2089 aaKnown RBP12.05□□□□□ -0.48
CSPG4P12-202ENST00000559989 PRF1P14222 555 aa12.05□□□□□ -0.48
CSPG4P12-202ENST00000559989 RNF182Q8N6D2 247 aa12.05□□□□□ -0.48
CSPG4P12-202ENST00000559989 TMEM171Q8WVE6 324 aa12.05□□□□□ -0.48
CSPG4P12-202ENST00000559989 RHNO1Q9BSD3 238 aa12.05□□□□□ -0.48
CSPG4P12-202ENST00000559989 REG1BP48304 166 aa12.05□□□□□ -0.48
CSPG4P12-202ENST00000559989 ELF5Q9UKW6 265 aaPredicted RBP12.05□□□□□ -0.48
CSPG4P12-202ENST00000559989 LMO7DNF2Z398 122 aa12.05□□□□□ -0.48
CSPG4P12-202ENST00000559989 NAPSAO96009 420 aa12.05□□□□□ -0.48
CSPG4P12-202ENST00000559989 CTSSP25774 331 aa12.05□□□□□ -0.48
CSPG4P12-202ENST00000559989 SF3B5Q9BWJ5 86 aaKnown RBP12.05□□□□□ -0.48
CSPG4P12-202ENST00000559989 F12P00748 615 aaPredicted RBP12.05□□□□□ -0.48
CSPG4P12-202ENST00000559989 CRPP02741 224 aa12.05□□□□□ -0.48
CSPG4P12-202ENST00000559989 STARD6P59095 220 aa12.05□□□□□ -0.48
CSPG4P12-202ENST00000559989 ZNF658BQ4V348 819 aaPredicted RBP12.05□□□□□ -0.48
CSPG4P12-202ENST00000559989 PHF7Q9BWX1 381 aaPredicted RBP12.05□□□□□ -0.48
CSPG4P12-202ENST00000559989 FCARP24071 287 aa12.05□□□□□ -0.48
CSPG4P12-202ENST00000559989 HIST1H4AP62805 103 aaKnown RBP12.05□□□□□ -0.48
CSPG4P12-202ENST00000559989 SMAD4Q13485 552 aaKnown RBP12.05□□□□□ -0.48
CSPG4P12-202ENST00000559989 CYB5R2Q6BCY4 276 aa12.05□□□□□ -0.48
CSPG4P12-202ENST00000559989 C17orf99Q6UX52 265 aa12.05□□□□□ -0.48
CSPG4P12-202ENST00000559989 MS4A6AQ9H2W1 248 aa12.05□□□□□ -0.48
CSPG4P12-202ENST00000559989 PUSL1Q8N0Z8 303 aaKnown RBP12.04□□□□□ -0.48
CSPG4P12-202ENST00000559989 ASXL3Q9C0F0 2248 aa12.04□□□□□ -0.48
CSPG4P12-202ENST00000559989 ZNF205O95201 554 aa12.04□□□□□ -0.48
CSPG4P12-202ENST00000559989 PF4P02776 101 aa12.04□□□□□ -0.48
CSPG4P12-202ENST00000559989 MVDP53602 400 aa12.04□□□□□ -0.48
CSPG4P12-202ENST00000559989 ACER2Q5QJU3 275 aa12.04□□□□□ -0.48
CSPG4P12-202ENST00000559989 VSTM2LQ96N03 204 aa12.04□□□□□ -0.48
CSPG4P12-202ENST00000559989 PGPEP1LA6NFU8 196 aa12.04□□□□□ -0.48
CSPG4P12-202ENST00000559989 J3QT63 122 aa12.04□□□□□ -0.48
CSPG4P12-202ENST00000559989 OGG1O15527 345 aa12.04□□□□□ -0.48
CSPG4P12-202ENST00000559989 ETHE1O95571 254 aa12.04□□□□□ -0.48
CSPG4P12-202ENST00000559989 NKX2-2O95096 273 aa12.04□□□□□ -0.48
CSPG4P12-202ENST00000559989 CD1AP06126 327 aa12.04□□□□□ -0.48
CSPG4P12-202ENST00000559989 GLIPR1P48060 266 aa12.04□□□□□ -0.48
CSPG4P12-202ENST00000559989 XAF1Q6GPH4 301 aa12.04□□□□□ -0.48
CSPG4P12-202ENST00000559989 CNRIP1Q96F85 164 aaPredicted RBP12.04□□□□□ -0.48
CSPG4P12-202ENST00000559989 KNTC1P50748 2209 aa12.04□□□□□ -0.48
CSPG4P12-202ENST00000559989 SAA1P0DJI8 122 aaPredicted RBP12.04□□□□□ -0.48
CSPG4P12-202ENST00000559989 SRFP11831 508 aa12.04□□□□□ -0.48
CSPG4P12-202ENST00000559989 TDGF1P3P51864 188 aa12.04□□□□□ -0.48
CSPG4P12-202ENST00000559989 GOLT1AQ6ZVE7 132 aa12.04□□□□□ -0.48
CSPG4P12-202ENST00000559989 OR51G1Q8NGK1 321 aa12.04□□□□□ -0.48
CSPG4P12-202ENST00000559989 TP53I13Q8NBR0 393 aaPredicted RBP12.04□□□□□ -0.48
CSPG4P12-202ENST00000559989 OR2H1Q9GZK4 316 aa12.04□□□□□ -0.48
CSPG4P12-202ENST00000559989 HILPDAQ9Y5L2 63 aa12.04□□□□□ -0.48
CSPG4P12-202ENST00000559989 CAMTA1Q9Y6Y1 1673 aa12.04□□□□□ -0.48
CSPG4P12-202ENST00000559989 CTSVO60911 334 aa12.04□□□□□ -0.48
CSPG4P12-202ENST00000559989 MPZL1O95297 269 aa12.04□□□□□ -0.48
CSPG4P12-202ENST00000559989 RPL8P62917 257 aaKnown RBP12.04□□□□□ -0.48
CSPG4P12-202ENST00000559989 ATXN8Q156A1 80 aa12.04□□□□□ -0.48
CSPG4P12-202ENST00000559989 FAM89BQ8N5H3 189 aa12.04□□□□□ -0.48
CSPG4P12-202ENST00000559989 SSC4DQ8WTU2 575 aa12.04□□□□□ -0.48
CSPG4P12-202ENST00000559989 C18orf15Q96N68 181 aa12.04□□□□□ -0.48
CSPG4P12-202ENST00000559989 VGLL1Q99990 258 aa12.04□□□□□ -0.48
CSPG4P12-202ENST00000559989 SCN11AQ9UI33 1791 aa12.04□□□□□ -0.48
CSPG4P12-202ENST00000559989 ATG2BQ96BY7 2078 aa12.03□□□□□ -0.48
CSPG4P12-202ENST00000559989 EML2O95834 649 aa12.03□□□□□ -0.48
CSPG4P12-202ENST00000559989 EFNB2P52799 333 aa12.03□□□□□ -0.48
CSPG4P12-202ENST00000559989 CLDN14O95500 239 aa12.03□□□□□ -0.48
CSPG4P12-202ENST00000559989 SNAI3Q3KNW1 292 aa12.03□□□□□ -0.48
CSPG4P12-202ENST00000559989 SHISA5Q8N114 240 aa12.03□□□□□ -0.48
CSPG4P12-202ENST00000559989 MEGF9Q9H1U4 602 aa12.03□□□□□ -0.48
CSPG4P12-202ENST00000559989 TMEFF2Q9UIK5 374 aaPredicted RBP12.03□□□□□ -0.48
CSPG4P12-202ENST00000559989 GCSAMQ8N6F7 178 aa12.03□□□□□ -0.48
CSPG4P12-202ENST00000559989 KCNS1Q96KK3 526 aa12.03□□□□□ -0.48
CSPG4P12-202ENST00000559989 SSC5DA1L4H1 1573 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms