RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 CR1P17927 2039 aa14.12□□□□□ -0.15
CHRNA3-206ENST00000559658 A0A087X0M5 115 aa14.12□□□□□ -0.15
CHRNA3-206ENST00000559658 IGHV2-26A0A0B4J1V2 119 aa14.12□□□□□ -0.15
CHRNA3-206ENST00000559658 A0A1B0GX30 115 aa14.12□□□□□ -0.15
CHRNA3-206ENST00000559658 G3V3Q6 166 aa14.12□□□□□ -0.15
CHRNA3-206ENST00000559658 HOXB5P09067 269 aa14.12□□□□□ -0.15
CHRNA3-206ENST00000559658 LYZL2Q7Z4W2 148 aa14.12□□□□□ -0.15
CHRNA3-206ENST00000559658 ABHD12Q8N2K0 398 aa14.12□□□□□ -0.15
CHRNA3-206ENST00000559658 OR5M8Q8NGP6 311 aa14.12□□□□□ -0.15
CHRNA3-206ENST00000559658 RAB39BQ96DA2 213 aa14.12□□□□□ -0.15
CHRNA3-206ENST00000559658 ZNF436Q9C0F3 470 aaPredicted RBP14.12□□□□□ -0.15
CHRNA3-206ENST00000559658 TMEM222Q9H0R3 208 aa14.12□□□□□ -0.15
CHRNA3-206ENST00000559658 IGHV2-70DA0A0C4DH43 119 aa14.12□□□□□ -0.15
CHRNA3-206ENST00000559658 H0Y980 276 aa14.12□□□□□ -0.15
CHRNA3-206ENST00000559658 J3QR06 171 aa14.12□□□□□ -0.15
CHRNA3-206ENST00000559658 M0R1X1 148 aa14.12□□□□□ -0.15
CHRNA3-206ENST00000559658 ITGB1BP1O14713 200 aa14.12□□□□□ -0.15
CHRNA3-206ENST00000559658 IGKV1-39P01597 117 aa14.12□□□□□ -0.15
CHRNA3-206ENST00000559658 IGKV1D-39P04432 117 aa14.12□□□□□ -0.15
CHRNA3-206ENST00000559658 TMEM30BQ3MIR4 351 aa14.12□□□□□ -0.15
CHRNA3-206ENST00000559658 ZNF585BQ52M93 769 aa14.12□□□□□ -0.15
CHRNA3-206ENST00000559658 Q5PR19 223 aa14.12□□□□□ -0.15
CHRNA3-206ENST00000559658 NCR3LG1Q68D85 454 aa14.12□□□□□ -0.15
CHRNA3-206ENST00000559658 HCP5Q6MZN7 132 aa14.12□□□□□ -0.15
CHRNA3-206ENST00000559658 C11orf88Q6PI97 169 aa14.12□□□□□ -0.15
CHRNA3-206ENST00000559658 LIAT1Q6ZQX7 453 aa14.12□□□□□ -0.15
CHRNA3-206ENST00000559658 PNKDQ8N490 385 aa14.12□□□□□ -0.15
CHRNA3-206ENST00000559658 ITPR3Q14573 2671 aa14.11□□□□□ -0.15
CHRNA3-206ENST00000559658 FAM25EA8MYX2 175 aa14.11□□□□□ -0.15
CHRNA3-206ENST00000559658 UCP1P25874 307 aa14.11□□□□□ -0.15
CHRNA3-206ENST00000559658 DUTP33316 252 aaKnown RBP14.11□□□□□ -0.15
CHRNA3-206ENST00000559658 REG1BP48304 166 aa14.11□□□□□ -0.15
CHRNA3-206ENST00000559658 RAB7AP51149 207 aa14.11□□□□□ -0.15
CHRNA3-206ENST00000559658 NKX2-5P52952 324 aaPredicted RBP14.11□□□□□ -0.15
CHRNA3-206ENST00000559658 LDLRAD2Q5SZI1 272 aa14.11□□□□□ -0.15
CHRNA3-206ENST00000559658 TMEM268Q5VZI3 342 aa14.11□□□□□ -0.15
CHRNA3-206ENST00000559658 SLC35G3Q8N808 338 aa14.11□□□□□ -0.15
CHRNA3-206ENST00000559658 COQ8AQ8NI60 647 aa14.11□□□□□ -0.15
CHRNA3-206ENST00000559658 SEC22AQ96IW7 307 aa14.11□□□□□ -0.15
CHRNA3-206ENST00000559658 OR10C1Q96KK4 312 aa14.11□□□□□ -0.15
CHRNA3-206ENST00000559658 ENSAO43768 121 aaKnown RBP14.1□□□□□ -0.15
CHRNA3-206ENST00000559658 VMO1Q7Z5L0 202 aa14.1□□□□□ -0.15
CHRNA3-206ENST00000559658 TCTEX1D2Q8WW35 142 aa14.1□□□□□ -0.15
CHRNA3-206ENST00000559658 C18orf12Q96KH6 178 aa14.1□□□□□ -0.15
CHRNA3-206ENST00000559658 KCNIP3Q9Y2W7 256 aa14.1□□□□□ -0.15
CHRNA3-206ENST00000559658 A0A0B4J2A0 478 aa14.1□□□□□ -0.15
CHRNA3-206ENST00000559658 A0A1W2PRD5 423 aa14.1□□□□□ -0.15
CHRNA3-206ENST00000559658 A0A1W2PRF3 423 aa14.1□□□□□ -0.15
CHRNA3-206ENST00000559658 A0A1W2PRM7 423 aa14.1□□□□□ -0.15
CHRNA3-206ENST00000559658 RBP4P02753 201 aa14.1□□□□□ -0.15
CHRNA3-206ENST00000559658 ANXA3P12429 323 aa14.1□□□□□ -0.15
CHRNA3-206ENST00000559658 SELENOHQ8IZQ5 122 aaKnown RBP14.1□□□□□ -0.15
CHRNA3-206ENST00000559658 TNFRSF14Q92956 283 aa14.1□□□□□ -0.15
CHRNA3-206ENST00000559658 SIRPDQ9H106 197 aa14.1□□□□□ -0.15
CHRNA3-206ENST00000559658 SHPKQ9UHJ6 478 aa14.1□□□□□ -0.15
CHRNA3-206ENST00000559658 A0A0G2JRQ6 117 aa14.09□□□□□ -0.15
CHRNA3-206ENST00000559658 C13orf42A0A1B0GVH6 325 aa14.09□□□□□ -0.15
CHRNA3-206ENST00000559658 A0A1W2PPH5 198 aa14.09□□□□□ -0.15
CHRNA3-206ENST00000559658 RAB29O14966 203 aa14.09□□□□□ -0.15
CHRNA3-206ENST00000559658 IGLV1-47P01700 117 aa14.09□□□□□ -0.15
CHRNA3-206ENST00000559658 HNRNPCP07910 306 aaKnown RBP eCLIP14.09□□□□□ -0.15
CHRNA3-206ENST00000559658 RPA2P15927 270 aa14.09□□□□□ -0.15
CHRNA3-206ENST00000559658 PAX6P26367 422 aa14.09□□□□□ -0.15
CHRNA3-206ENST00000559658 DSCR9P59020 149 aa14.09□□□□□ -0.15
CHRNA3-206ENST00000559658 ZNF816Q0VGE8 651 aaPredicted RBP14.09□□□□□ -0.15
CHRNA3-206ENST00000559658 IZUMO4Q1ZYL8 232 aa14.09□□□□□ -0.15
CHRNA3-206ENST00000559658 GGNBP1Q5YKI7 109 aa14.09□□□□□ -0.15
CHRNA3-206ENST00000559658 ZNF383Q8NA42 475 aa14.09□□□□□ -0.15
CHRNA3-206ENST00000559658 OR9G1Q8NH87 305 aa14.09□□□□□ -0.15
CHRNA3-206ENST00000559658 ZNF596Q8TC21 504 aa14.09□□□□□ -0.15
CHRNA3-206ENST00000559658 PRRC2AP48634 2157 aaKnown RBP14.09□□□□□ -0.15
CHRNA3-206ENST00000559658 RNF223E7ERA6 249 aa14.08□□□□□ -0.16
CHRNA3-206ENST00000559658 M0R1W7 72 aa14.08□□□□□ -0.16
CHRNA3-206ENST00000559658 OR2A4O95047 310 aa14.08□□□□□ -0.16
CHRNA3-206ENST00000559658 CDS2O95674 445 aa14.08□□□□□ -0.16
CHRNA3-206ENST00000559658 MMP9P14780 707 aa14.08□□□□□ -0.16
CHRNA3-206ENST00000559658 USF1P22415 310 aaPredicted RBP14.08□□□□□ -0.16
CHRNA3-206ENST00000559658 TCTE3Q8IZS6 198 aa14.08□□□□□ -0.16
CHRNA3-206ENST00000559658 LRRC75A-AS1Q8N1F1 130 aa14.08□□□□□ -0.16
CHRNA3-206ENST00000559658 LRTM2Q8N967 370 aa14.08□□□□□ -0.16
CHRNA3-206ENST00000559658 ZBTB34Q8NCN2 500 aa14.08□□□□□ -0.16
CHRNA3-206ENST00000559658 OR4P4Q8NGL7 312 aa14.08□□□□□ -0.16
CHRNA3-206ENST00000559658 OR10X1Q8NGY0 326 aa14.08□□□□□ -0.16
CHRNA3-206ENST00000559658 DDB2Q92466 427 aa14.08□□□□□ -0.16
CHRNA3-206ENST00000559658 TMEM56Q96MV1 263 aa14.08□□□□□ -0.16
CHRNA3-206ENST00000559658 OR2A7Q96R45 310 aa14.08□□□□□ -0.16
CHRNA3-206ENST00000559658 PCGF1Q9BSM1 259 aa14.08□□□□□ -0.16
CHRNA3-206ENST00000559658 CLEC7AQ9BXN2 247 aa14.08□□□□□ -0.16
CHRNA3-206ENST00000559658 MRPL20Q9BYC9 149 aaKnown RBP14.08□□□□□ -0.16
CHRNA3-206ENST00000559658 METTL8Q9H825 291 aaKnown RBP14.08□□□□□ -0.16
CHRNA3-206ENST00000559658 LIN7CQ9NUP9 197 aaKnown RBP14.08□□□□□ -0.16
CHRNA3-206ENST00000559658 TMEM56-RWDD3S4R434 201 aa14.08□□□□□ -0.16
CHRNA3-206ENST00000559658 RNASEK-C17orf49H0YIS7 233 aa14.08□□□□□ -0.16
CHRNA3-206ENST00000559658 FOXH1O75593 365 aa14.08□□□□□ -0.16
CHRNA3-206ENST00000559658 S1PR2O95136 353 aa14.08□□□□□ -0.16
CHRNA3-206ENST00000559658 HOXB4P17483 251 aaPredicted RBP14.08□□□□□ -0.16
CHRNA3-206ENST00000559658 S100GP29377 79 aa14.08□□□□□ -0.16
CHRNA3-206ENST00000559658 MSMO1Q15800 293 aa14.08□□□□□ -0.16
CHRNA3-206ENST00000559658 HLA-DRB5Q30154 266 aa14.08□□□□□ -0.16
CHRNA3-206ENST00000559658 ZNF833PQ6ZTB9 187 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms