RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 FAM230AA0A1W2PPH8 454 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 A6NLC8 198 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 K7N7A8 449 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 TMPRSS2O15393 492 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 SOCS1O15524 211 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 ST8SIA3O43173 380 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 HSPA12AO43301 675 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 SPRY3O43610 288 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 PITX3O75364 302 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 CLN5O75503 358 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 CRTAPO75718 401 aaPredicted RBP4.88□□□□□ -1.63
USP3-212ENST00000559276 HSPB1P04792 205 aaKnown RBP4.88□□□□□ -1.63
USP3-212ENST00000559276 SFTPBP07988 381 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 CD55P08174 381 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 HCKP08631 526 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 HAAOP46952 286 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 TMEM50BP56557 158 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 CLRN1P58418 232 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 RAB4BP61018 213 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 LCN2P80188 198 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 DEFA6Q01524 100 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 PAX2Q02962 417 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 BAXQ07812 192 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 ZNF616Q08AN1 781 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 ENDOGQ14249 297 aaKnown RBP4.88□□□□□ -1.63
USP3-212ENST00000559276 GNMTQ14749 295 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 OR8G1Q15617 311 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 TBC1D28Q2M2D7 210 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 SLC22A6Q4U2R8 563 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 KRBOX4Q5JUW0 171 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 FAM27BQ5VT28 67 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 MBNL2Q5VZF2 373 aaKnown RBP4.88□□□□□ -1.63
USP3-212ENST00000559276 GGNBP1Q5YKI7 109 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 FOXL2NBQ6ZUU3 175 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 SLC16A13Q7RTY0 426 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 BCL6BQ8N143 479 aaPredicted RBP4.88□□□□□ -1.63
USP3-212ENST00000559276 LGI3Q8N145 548 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 ZNF565Q8N9K5 539 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 SUMF2Q8NBJ7 301 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 OR51T1Q8NGJ9 327 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 SGMS2Q8NHU3 365 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 OR51E1Q8TCB6 317 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 KLF14Q8TD94 323 aaPredicted RBP4.88□□□□□ -1.63
USP3-212ENST00000559276 SECTM1Q8WVN6 248 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 CCL17Q92583 94 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 PPP1R14AQ96A00 147 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 RAB39BQ96DA2 213 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 ARHGAP5-AS1Q96IT6 56 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 TECTBQ96PL2 329 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 GPER1Q99527 375 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 ZNF747Q9BV97 191 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 PAPOLGQ9BWT3 736 aaKnown RBP4.88□□□□□ -1.63
USP3-212ENST00000559276 OR2H1Q9GZK4 316 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 CHST5Q9GZS9 411 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 EIF5A2Q9GZV4 153 aaKnown RBP4.88□□□□□ -1.63
USP3-212ENST00000559276 SLC25A31Q9H0C2 315 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 C7orf69Q9H7B7 122 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 NAA60Q9H7X0 242 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 SAP30LQ9HAJ7 183 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 MSL2Q9HCI7 577 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 UFSP2Q9NUQ7 469 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 NECAP2Q9NVZ3 263 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 GFOD1Q9NXC2 390 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 GAR1Q9NY12 217 aaKnown RBP4.88□□□□□ -1.63
USP3-212ENST00000559276 GSKIPQ9P0R6 139 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 ANXA10Q9UJ72 324 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 POLR1DQ9Y2S0 133 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 POLR3KQ9Y2Y1 108 aaPredicted RBP4.88□□□□□ -1.63
USP3-212ENST00000559276 PPIAL4AQ9Y536 164 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 V9GYS6 101 aa4.88□□□□□ -1.63
USP3-212ENST00000559276 WNK2Q9Y3S1 2297 aa4.87□□□□□ -1.63
USP3-212ENST00000559276 PPIAL4EA0A075B759 164 aa4.87□□□□□ -1.63
USP3-212ENST00000559276 PPIAL4CA0A0B4J2A2 164 aa4.87□□□□□ -1.63
USP3-212ENST00000559276 A0A1W2PPH5 198 aa4.87□□□□□ -1.63
USP3-212ENST00000559276 C5orf49A4QMS7 147 aa4.87□□□□□ -1.63
USP3-212ENST00000559276 DNAJC9-AS1A6NH13 148 aa4.87□□□□□ -1.63
USP3-212ENST00000559276 C9JQL5 133 aa4.87□□□□□ -1.63
USP3-212ENST00000559276 PPIAL4DF5H284 164 aa4.87□□□□□ -1.63
USP3-212ENST00000559276 H3BSH0 61 aa4.87□□□□□ -1.63
USP3-212ENST00000559276 DHRS3O75911 302 aa4.87□□□□□ -1.63
USP3-212ENST00000559276 OR2C1O95371 312 aa4.87□□□□□ -1.63
USP3-212ENST00000559276 PRH1P02810 166 aa4.87□□□□□ -1.63
USP3-212ENST00000559276 SNRNP70P08621 437 aaKnown RBP4.87□□□□□ -1.63
USP3-212ENST00000559276 PPIAL4FP0DN26 164 aa4.87□□□□□ -1.63
USP3-212ENST00000559276 HIST1H1BP16401 226 aaKnown RBP4.87□□□□□ -1.63
USP3-212ENST00000559276 CCNOP22674 350 aa4.87□□□□□ -1.63
USP3-212ENST00000559276 GLRA1P23415 457 aa4.87□□□□□ -1.63
USP3-212ENST00000559276 BLVRBP30043 206 aaPredicted RBP4.87□□□□□ -1.63
USP3-212ENST00000559276 APLNRP35414 380 aa4.87□□□□□ -1.63
USP3-212ENST00000559276 TAGLN2P37802 199 aaKnown RBP4.87□□□□□ -1.63
USP3-212ENST00000559276 OR3A4PP47883 348 aa4.87□□□□□ -1.63
USP3-212ENST00000559276 MTCP1P56278 107 aa4.87□□□□□ -1.63
USP3-212ENST00000559276 ZNF121P58317 390 aaPredicted RBP4.87□□□□□ -1.63
USP3-212ENST00000559276 SELENOVP59797 346 aa4.87□□□□□ -1.63
USP3-212ENST00000559276 PLP2Q04941 152 aa4.87□□□□□ -1.63
USP3-212ENST00000559276 PSG7Q13046 419 aa4.87□□□□□ -1.63
USP3-212ENST00000559276 KIAA0141Q14154 515 aaPredicted RBP4.87□□□□□ -1.63
USP3-212ENST00000559276 KISS1Q15726 138 aa4.87□□□□□ -1.63
USP3-212ENST00000559276 SRSF7Q16629 238 aaKnown RBP eCLIP4.87□□□□□ -1.63
USP3-212ENST00000559276 ZNF718Q3SXZ3 478 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms