RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 BRWD1-AS2P59051 145 aa8.7□□□□□ -1.02
TPM1-217ENST00000559108 ARPC4P59998 168 aa8.7□□□□□ -1.02
TPM1-217ENST00000559108 RPL30P62888 115 aaKnown RBP8.7□□□□□ -1.02
TPM1-217ENST00000559108 SCGB2A2Q13296 93 aa8.7□□□□□ -1.02
TPM1-217ENST00000559108 EBI3Q14213 229 aa8.7□□□□□ -1.02
TPM1-217ENST00000559108 MOB3BQ86TA1 216 aa8.7□□□□□ -1.02
TPM1-217ENST00000559108 TGIF2LXQ8IUE1 241 aa8.7□□□□□ -1.02
TPM1-217ENST00000559108 EDARADDQ8WWZ3 215 aa8.7□□□□□ -1.02
TPM1-217ENST00000559108 AKIP1Q9NQ31 210 aa8.7□□□□□ -1.02
TPM1-217ENST00000559108 CCL28Q9NRJ3 127 aa8.7□□□□□ -1.02
TPM1-217ENST00000559108 PLSCR3Q9NRY6 295 aa8.7□□□□□ -1.02
TPM1-217ENST00000559108 NECAP2Q9NVZ3 263 aa8.7□□□□□ -1.02
TPM1-217ENST00000559108 C1RLQ9NZP8 487 aa8.7□□□□□ -1.02
TPM1-217ENST00000559108 OR5H14A6NHG9 310 aa8.69□□□□□ -1.02
TPM1-217ENST00000559108 H0YJW9 148 aa8.69□□□□□ -1.02
TPM1-217ENST00000559108 CD74P04233 296 aa8.69□□□□□ -1.02
TPM1-217ENST00000559108 CTXN2P0C2S0 81 aa8.69□□□□□ -1.02
TPM1-217ENST00000559108 GPR12P47775 334 aa8.69□□□□□ -1.02
TPM1-217ENST00000559108 FXYD4P59646 89 aa8.69□□□□□ -1.02
TPM1-217ENST00000559108 HNF4GQ14541 408 aa8.69□□□□□ -1.02
TPM1-217ENST00000559108 BAK1Q16611 211 aa8.69□□□□□ -1.02
TPM1-217ENST00000559108 VAX1Q5SQQ9 334 aa8.69□□□□□ -1.02
TPM1-217ENST00000559108 AADACL3Q5VUY0 350 aa8.69□□□□□ -1.02
TPM1-217ENST00000559108 C16orf87Q6PH81 154 aa8.69□□□□□ -1.02
TPM1-217ENST00000559108 DHRS11Q6UWP2 260 aa8.69□□□□□ -1.02
TPM1-217ENST00000559108 Q6ZSV7 163 aa8.69□□□□□ -1.02
TPM1-217ENST00000559108 OR8H3Q8N146 312 aa8.69□□□□□ -1.02
TPM1-217ENST00000559108 OR5H2Q8NGV7 314 aa8.69□□□□□ -1.02
TPM1-217ENST00000559108 OR5R1Q8NH85 324 aa8.69□□□□□ -1.02
TPM1-217ENST00000559108 FAM216AQ8WUB2 273 aa8.69□□□□□ -1.02
TPM1-217ENST00000559108 CAPSLQ8WWF8 208 aa8.69□□□□□ -1.02
TPM1-217ENST00000559108 GIMAP1Q8WWP7 306 aa8.69□□□□□ -1.02
TPM1-217ENST00000559108 FCAMRQ8WWV6 532 aa8.69□□□□□ -1.02
TPM1-217ENST00000559108 DDB2Q92466 427 aa8.69□□□□□ -1.02
TPM1-217ENST00000559108 EAF1Q96JC9 268 aaPredicted RBP8.69□□□□□ -1.02
TPM1-217ENST00000559108 C19orf24Q9BVV8 132 aa8.69□□□□□ -1.02
TPM1-217ENST00000559108 PIPOXQ9P0Z9 390 aa8.69□□□□□ -1.02
TPM1-217ENST00000559108 SIGLEC9Q9Y336 463 aa8.69□□□□□ -1.02
TPM1-217ENST00000559108 PLXNB1O43157 2135 aa8.68□□□□□ -1.02
TPM1-217ENST00000559108 M0R1X1 148 aa8.68□□□□□ -1.02
TPM1-217ENST00000559108 RAB29O14966 203 aa8.68□□□□□ -1.02
TPM1-217ENST00000559108 RBBP9O75884 186 aa8.68□□□□□ -1.02
TPM1-217ENST00000559108 IGKV1-16P04430 117 aa8.68□□□□□ -1.02
TPM1-217ENST00000559108 IL3RAP26951 378 aa8.68□□□□□ -1.02
TPM1-217ENST00000559108 DUTP33316 252 aaKnown RBP8.68□□□□□ -1.02
TPM1-217ENST00000559108 S100A5P33763 92 aa8.68□□□□□ -1.02
TPM1-217ENST00000559108 F2RL1P55085 397 aa8.68□□□□□ -1.02
TPM1-217ENST00000559108 BLCAPP62952 87 aa8.68□□□□□ -1.02
TPM1-217ENST00000559108 KLF9Q13886 244 aaPredicted RBP8.68□□□□□ -1.02
TPM1-217ENST00000559108 TMEM95Q3KNT9 176 aa8.68□□□□□ -1.02
TPM1-217ENST00000559108 FAM71F2Q6NXP2 309 aa8.68□□□□□ -1.02
TPM1-217ENST00000559108 LHFPL1Q86WI0 220 aa8.68□□□□□ -1.02
TPM1-217ENST00000559108 TMEM17Q86X19 198 aa8.68□□□□□ -1.02
TPM1-217ENST00000559108 TMEM229BQ8NBD8 167 aa8.68□□□□□ -1.02
TPM1-217ENST00000559108 OR5AN1Q8NGI8 311 aa8.68□□□□□ -1.02
TPM1-217ENST00000559108 OR4C16Q8NGL9 310 aa8.68□□□□□ -1.02
TPM1-217ENST00000559108 MOB3AQ96BX8 217 aa8.68□□□□□ -1.02
TPM1-217ENST00000559108 JMJD8Q96S16 334 aa8.68□□□□□ -1.02
TPM1-217ENST00000559108 ZNF2Q9BSG1 426 aaPredicted RBP8.68□□□□□ -1.02
TPM1-217ENST00000559108 DPAGT1Q9H3H5 408 aa8.68□□□□□ -1.02
TPM1-217ENST00000559108 ZNF702PQ9H963 129 aa8.68□□□□□ -1.02
TPM1-217ENST00000559108 BATF3Q9NR55 127 aa8.68□□□□□ -1.02
TPM1-217ENST00000559108 ABCB10Q9NRK6 738 aa8.68□□□□□ -1.02
TPM1-217ENST00000559108 PTTG2Q9NZH5 202 aa8.68□□□□□ -1.02
TPM1-217ENST00000559108 GAB2Q9UQC2 676 aa8.68□□□□□ -1.02
TPM1-217ENST00000559108 COL6A5A8TX70 2615 aa8.67□□□□□ -1.02
TPM1-217ENST00000559108 ANKRD20A5PA0PJZ0 165 aa8.67□□□□□ -1.02
TPM1-217ENST00000559108 TRIM77I1YAP6 450 aa8.67□□□□□ -1.02
TPM1-217ENST00000559108 TNFSF12O43508 249 aa8.67□□□□□ -1.02
TPM1-217ENST00000559108 CD1BP29016 333 aa8.67□□□□□ -1.02
TPM1-217ENST00000559108 GNRHRP30968 328 aa8.67□□□□□ -1.02
TPM1-217ENST00000559108 LUMP51884 338 aaPredicted RBP8.67□□□□□ -1.02
TPM1-217ENST00000559108 TAS2R46P59540 309 aa8.67□□□□□ -1.02
TPM1-217ENST00000559108 KRTAP10-3P60369 221 aa8.67□□□□□ -1.02
TPM1-217ENST00000559108 ACTBP60709 375 aa8.67□□□□□ -1.02
TPM1-217ENST00000559108 ACTG1P63261 375 aa8.67□□□□□ -1.02
TPM1-217ENST00000559108 MRPS10P82664 201 aaKnown RBP8.67□□□□□ -1.02
TPM1-217ENST00000559108 PYDC2Q56P42 97 aa8.67□□□□□ -1.02
TPM1-217ENST00000559108 HIST2H2BDQ6DRA6 164 aa8.67□□□□□ -1.02
TPM1-217ENST00000559108 CCDC144NLQ6NUI1 221 aa8.67□□□□□ -1.02
TPM1-217ENST00000559108 ZNF818PQ6ZRF7 136 aa8.67□□□□□ -1.02
TPM1-217ENST00000559108 THNSL2Q86YJ6 484 aa8.67□□□□□ -1.02
TPM1-217ENST00000559108 ZNF645Q8N7E2 425 aa8.67□□□□□ -1.02
TPM1-217ENST00000559108 SECTM1Q8WVN6 248 aa8.67□□□□□ -1.02
TPM1-217ENST00000559108 RBM14Q96PK6 669 aaKnown RBP8.67□□□□□ -1.02
TPM1-217ENST00000559108 SLC25A33Q9BSK2 321 aa8.67□□□□□ -1.02
TPM1-217ENST00000559108 THAP7Q9BT49 309 aaPredicted RBP8.67□□□□□ -1.02
TPM1-217ENST00000559108 ZNF221Q9UK13 617 aa8.67□□□□□ -1.02
TPM1-217ENST00000559108 LINC01548A6NM66 108 aa8.66□□□□□ -1.02
TPM1-217ENST00000559108 TXNL1O43396 289 aa8.66□□□□□ -1.02
TPM1-217ENST00000559108 OR2F2O95006 317 aa8.66□□□□□ -1.02
TPM1-217ENST00000559108 HKR1P10072 659 aa8.66□□□□□ -1.02
TPM1-217ENST00000559108 TMEM11P17152 192 aa8.66□□□□□ -1.02
TPM1-217ENST00000559108 MDKP21741 143 aaPredicted RBP8.66□□□□□ -1.02
TPM1-217ENST00000559108 BRS3P32247 399 aa8.66□□□□□ -1.02
TPM1-217ENST00000559108 TAS2R19P59542 299 aa8.66□□□□□ -1.02
TPM1-217ENST00000559108 HES1Q14469 280 aa8.66□□□□□ -1.02
TPM1-217ENST00000559108 RNASE10Q5GAN6 216 aaKnown RBP8.66□□□□□ -1.02
TPM1-217ENST00000559108 OR2B11Q5JQS5 317 aa8.66□□□□□ -1.02
TPM1-217ENST00000559108 STEAP1BQ6NZ63 245 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms