RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 VDAC1P21796 283 aa6.4□□□□□ -1.38
LRRC28-211ENST00000558890 CAMLGP49069 296 aa6.4□□□□□ -1.38
LRRC28-211ENST00000558890 RAB5CP51148 216 aa6.4□□□□□ -1.38
LRRC28-211ENST00000558890 CAV2P51636 162 aa6.4□□□□□ -1.38
LRRC28-211ENST00000558890 EWSR1Q01844 656 aaKnown RBP eCLIP6.4□□□□□ -1.38
LRRC28-211ENST00000558890 ZNF273Q14593 569 aa6.4□□□□□ -1.38
LRRC28-211ENST00000558890 HERPUD1Q15011 391 aa6.4□□□□□ -1.38
LRRC28-211ENST00000558890 ALKBH6Q3KRA9 238 aa6.4□□□□□ -1.38
LRRC28-211ENST00000558890 Q6P435 159 aa6.4□□□□□ -1.38
LRRC28-211ENST00000558890 ZNF818PQ6ZRF7 136 aa6.4□□□□□ -1.38
LRRC28-211ENST00000558890 Q6ZRG5 221 aa6.4□□□□□ -1.38
LRRC28-211ENST00000558890 SELENOHQ8IZQ5 122 aaKnown RBP6.4□□□□□ -1.38
LRRC28-211ENST00000558890 OR2C3Q8N628 320 aa6.4□□□□□ -1.38
LRRC28-211ENST00000558890 COMMD1Q8N668 190 aa6.4□□□□□ -1.38
LRRC28-211ENST00000558890 BOLLQ8N9W6 283 aaKnown RBP6.4□□□□□ -1.38
LRRC28-211ENST00000558890 SCCPDHQ8NBX0 429 aa6.4□□□□□ -1.38
LRRC28-211ENST00000558890 OR2Z1Q8NG97 314 aa6.4□□□□□ -1.38
LRRC28-211ENST00000558890 OR10V1Q8NGI7 309 aa6.4□□□□□ -1.38
LRRC28-211ENST00000558890 OR52M1Q8NGK5 317 aa6.4□□□□□ -1.38
LRRC28-211ENST00000558890 LHFPL5Q8TAF8 219 aa6.4□□□□□ -1.38
LRRC28-211ENST00000558890 AKR1E2Q96JD6 320 aa6.4□□□□□ -1.38
LRRC28-211ENST00000558890 OR2V2Q96R30 315 aa6.4□□□□□ -1.38
LRRC28-211ENST00000558890 NKX6-2Q9C056 277 aaPredicted RBP6.4□□□□□ -1.38
LRRC28-211ENST00000558890 MS4A7Q9GZW8 240 aaPredicted RBP6.4□□□□□ -1.38
LRRC28-211ENST00000558890 HES4Q9HCC6 221 aa6.4□□□□□ -1.38
LRRC28-211ENST00000558890 MSL2Q9HCI7 577 aa6.4□□□□□ -1.38
LRRC28-211ENST00000558890 CCL28Q9NRJ3 127 aa6.4□□□□□ -1.38
LRRC28-211ENST00000558890 LIN7CQ9NUP9 197 aaKnown RBP6.4□□□□□ -1.38
LRRC28-211ENST00000558890 KCNIP1Q9NZI2 227 aa6.4□□□□□ -1.38
LRRC28-211ENST00000558890 KCNS2Q9ULS6 477 aa6.4□□□□□ -1.38
LRRC28-211ENST00000558890 STRAPQ9Y3F4 350 aaKnown RBP6.4□□□□□ -1.38
LRRC28-211ENST00000558890 RBM7Q9Y580 266 aaKnown RBP6.4□□□□□ -1.38
LRRC28-211ENST00000558890 NAV3Q8IVL0 2385 aa6.39□□□□□ -1.39
LRRC28-211ENST00000558890 NF1P21359 2839 aa6.39□□□□□ -1.39
LRRC28-211ENST00000558890 IGKV1D-13A0A0B4J2D9 117 aa6.39□□□□□ -1.39
LRRC28-211ENST00000558890 IGKV1-6A0A0C4DH72 117 aa6.39□□□□□ -1.39
LRRC28-211ENST00000558890 A6NLC8 198 aa6.39□□□□□ -1.39
LRRC28-211ENST00000558890 SLC33A1O00400 549 aaPredicted RBP6.39□□□□□ -1.39
LRRC28-211ENST00000558890 SSSCA1O60232 199 aa6.39□□□□□ -1.39
LRRC28-211ENST00000558890 PGLYRP1O75594 196 aaPredicted RBP6.39□□□□□ -1.39
LRRC28-211ENST00000558890 SNAPINO95295 136 aa6.39□□□□□ -1.39
LRRC28-211ENST00000558890 TSPAN15O95858 294 aa6.39□□□□□ -1.39
LRRC28-211ENST00000558890 HAND1O96004 215 aa6.39□□□□□ -1.39
LRRC28-211ENST00000558890 LHBP01229 141 aa6.39□□□□□ -1.39
LRRC28-211ENST00000558890 IGHV4-39P01824 125 aa6.39□□□□□ -1.39
LRRC28-211ENST00000558890 PRH1P02810 166 aa6.39□□□□□ -1.39
LRRC28-211ENST00000558890 GRPP07492 148 aa6.39□□□□□ -1.39
LRRC28-211ENST00000558890 WNT2P09544 360 aa6.39□□□□□ -1.39
LRRC28-211ENST00000558890 IGKV1-13P0DP09 117 aa6.39□□□□□ -1.39
LRRC28-211ENST00000558890 IRF2P14316 349 aa6.39□□□□□ -1.39
LRRC28-211ENST00000558890 MUC1P15941 1255 aaPredicted RBP6.39□□□□□ -1.39
LRRC28-211ENST00000558890 ATF4P18848 351 aaPredicted RBP6.39□□□□□ -1.39
LRRC28-211ENST00000558890 F2RP25116 425 aa6.39□□□□□ -1.39
LRRC28-211ENST00000558890 LPAR6P43657 344 aa6.39□□□□□ -1.39
LRRC28-211ENST00000558890 ERVK11-1P61568 191 aa6.39□□□□□ -1.39
LRRC28-211ENST00000558890 BAXQ07812 192 aa6.39□□□□□ -1.39
LRRC28-211ENST00000558890 HMGN3Q15651 99 aa6.39□□□□□ -1.39
LRRC28-211ENST00000558890 HFEQ30201 348 aa6.39□□□□□ -1.39
LRRC28-211ENST00000558890 ZNF497Q6ZNH5 498 aa6.39□□□□□ -1.39
LRRC28-211ENST00000558890 WDR86Q86TI4 376 aa6.39□□□□□ -1.39
LRRC28-211ENST00000558890 LFNGQ8NES3 379 aa6.39□□□□□ -1.39
LRRC28-211ENST00000558890 WFDC11Q8NEX6 87 aa6.39□□□□□ -1.39
LRRC28-211ENST00000558890 DMBX1Q8NFW5 382 aa6.39□□□□□ -1.39
LRRC28-211ENST00000558890 IL1F10Q8WWZ1 152 aa6.39□□□□□ -1.39
LRRC28-211ENST00000558890 GINS3Q9BRX5 216 aa6.39□□□□□ -1.39
LRRC28-211ENST00000558890 ARV1Q9H2C2 271 aa6.39□□□□□ -1.39
LRRC28-211ENST00000558890 CHODLQ9H9P2 273 aa6.39□□□□□ -1.39
LRRC28-211ENST00000558890 GCM1Q9NP62 436 aa6.39□□□□□ -1.39
LRRC28-211ENST00000558890 RNF7Q9UBF6 113 aa6.39□□□□□ -1.39
LRRC28-211ENST00000558890 FZR1Q9UM11 496 aa6.39□□□□□ -1.39
LRRC28-211ENST00000558890 PPP1R3CQ9UQK1 317 aa6.39□□□□□ -1.39
LRRC28-211ENST00000558890 CARHSP1Q9Y2V2 147 aaKnown RBP6.39□□□□□ -1.39
LRRC28-211ENST00000558890 FN1P02751 2386 aaKnown RBP6.39□□□□□ -1.39
LRRC28-211ENST00000558890 A0A096LNT2 108 aa6.38□□□□□ -1.39
LRRC28-211ENST00000558890 A0A1B0GU03 582 aa6.38□□□□□ -1.39
LRRC28-211ENST00000558890 CDIPTO14735 213 aa6.38□□□□□ -1.39
LRRC28-211ENST00000558890 TNFSF12O43508 249 aa6.38□□□□□ -1.39
LRRC28-211ENST00000558890 SPRY3O43610 288 aa6.38□□□□□ -1.39
LRRC28-211ENST00000558890 SLC25A6P12236 298 aa6.38□□□□□ -1.39
LRRC28-211ENST00000558890 CDKN1AP38936 164 aa6.38□□□□□ -1.39
LRRC28-211ENST00000558890 AKR1C2P52895 323 aa6.38□□□□□ -1.39
LRRC28-211ENST00000558890 POLR2GP62487 172 aaKnown RBP eCLIP6.38□□□□□ -1.39
LRRC28-211ENST00000558890 RPL23AP62750 156 aaKnown RBP6.38□□□□□ -1.39
LRRC28-211ENST00000558890 PAX5Q02548 391 aa6.38□□□□□ -1.39
LRRC28-211ENST00000558890 ZNF616Q08AN1 781 aa6.38□□□□□ -1.39
LRRC28-211ENST00000558890 ZNF146Q15072 292 aa6.38□□□□□ -1.39
LRRC28-211ENST00000558890 PEA15Q15121 130 aa6.38□□□□□ -1.39
LRRC28-211ENST00000558890 SMIM21Q3B7S5 101 aa6.38□□□□□ -1.39
LRRC28-211ENST00000558890 TMEM155Q4W5P6 130 aa6.38□□□□□ -1.39
LRRC28-211ENST00000558890 NMSQ5H8A3 153 aa6.38□□□□□ -1.39
LRRC28-211ENST00000558890 TEX36Q5VZQ5 186 aa6.38□□□□□ -1.39
LRRC28-211ENST00000558890 BTNL8Q6UX41 500 aa6.38□□□□□ -1.39
LRRC28-211ENST00000558890 WDR82Q6UXN9 313 aa6.38□□□□□ -1.39
LRRC28-211ENST00000558890 STX12Q86Y82 276 aa6.38□□□□□ -1.39
LRRC28-211ENST00000558890 C11orf53Q8IXP5 236 aa6.38□□□□□ -1.39
LRRC28-211ENST00000558890 OR51H1Q8NH63 302 aa6.38□□□□□ -1.39
LRRC28-211ENST00000558890 PLPPR1Q8TBJ4 325 aa6.38□□□□□ -1.39
LRRC28-211ENST00000558890 ITLN1Q8WWA0 313 aa6.38□□□□□ -1.39
LRRC28-211ENST00000558890 TIMD4Q96H15 378 aa6.38□□□□□ -1.39
LRRC28-211ENST00000558890 PBDC1Q9BVG4 233 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 163.6 ms