RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 ARPC4P59998 168 aa9.95□□□□□ -0.82
LRRC28-206ENST00000558471 ABCA11PQ4W5N1 156 aa9.95□□□□□ -0.82
LRRC28-206ENST00000558471 C11orf88Q6PI97 169 aa9.95□□□□□ -0.82
LRRC28-206ENST00000558471 GLDNQ6ZMI3 551 aaPredicted RBP9.95□□□□□ -0.82
LRRC28-206ENST00000558471 LAX1Q8IWV1 398 aa9.95□□□□□ -0.82
LRRC28-206ENST00000558471 Q8N2B8 174 aa9.95□□□□□ -0.82
LRRC28-206ENST00000558471 DRAXINQ8NBI3 349 aaPredicted RBP9.95□□□□□ -0.82
LRRC28-206ENST00000558471 OR2T6Q8NHC8 308 aa9.95□□□□□ -0.82
LRRC28-206ENST00000558471 GPX8Q8TED1 209 aa9.95□□□□□ -0.82
LRRC28-206ENST00000558471 RITA1Q96K30 269 aa9.95□□□□□ -0.82
LRRC28-206ENST00000558471 OR2D2Q9H210 308 aa9.95□□□□□ -0.82
LRRC28-206ENST00000558471 IFT46Q9NQC8 304 aa9.95□□□□□ -0.82
LRRC28-206ENST00000558471 PLSCR3Q9NRY6 295 aa9.95□□□□□ -0.82
LRRC28-206ENST00000558471 SERTAD4Q9NUC0 356 aa9.95□□□□□ -0.82
LRRC28-206ENST00000558471 SDHAF2Q9NX18 166 aa9.95□□□□□ -0.82
LRRC28-206ENST00000558471 ANAPC10Q9UM13 185 aa9.95□□□□□ -0.82
LRRC28-206ENST00000558471 MOB4Q9Y3A3 225 aa9.95□□□□□ -0.82
LRRC28-206ENST00000558471 RBM7Q9Y580 266 aaKnown RBP9.95□□□□□ -0.82
LRRC28-206ENST00000558471 NAT1P18440 290 aa9.94□□□□□ -0.82
LRRC28-206ENST00000558471 F2RL1P55085 397 aa9.94□□□□□ -0.82
LRRC28-206ENST00000558471 KRTAP10-3P60369 221 aa9.94□□□□□ -0.82
LRRC28-206ENST00000558471 SRSF4Q08170 494 aaKnown RBP9.94□□□□□ -0.82
LRRC28-206ENST00000558471 LYSMD2Q8IV50 215 aa9.94□□□□□ -0.82
LRRC28-206ENST00000558471 C5orf56Q8N8D9 126 aa9.94□□□□□ -0.82
LRRC28-206ENST00000558471 ZNF383Q8NA42 475 aa9.94□□□□□ -0.82
LRRC28-206ENST00000558471 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.94□□□□□ -0.82
LRRC28-206ENST00000558471 OR5AP2Q8NGF4 316 aa9.94□□□□□ -0.82
LRRC28-206ENST00000558471 WFDC12Q8WWY7 111 aa9.94□□□□□ -0.82
LRRC28-206ENST00000558471 C5orf30Q96GV9 206 aa9.94□□□□□ -0.82
LRRC28-206ENST00000558471 ABHD1Q96SE0 405 aa9.94□□□□□ -0.82
LRRC28-206ENST00000558471 NXF2Q9GZY0 626 aaKnown RBP9.94□□□□□ -0.82
LRRC28-206ENST00000558471 SCPEP1Q9HB40 452 aa9.94□□□□□ -0.82
LRRC28-206ENST00000558471 NECAP2Q9NVZ3 263 aa9.94□□□□□ -0.82
LRRC28-206ENST00000558471 ADAM30Q9UKF2 790 aa9.94□□□□□ -0.82
LRRC28-206ENST00000558471 OR2W1Q9Y3N9 320 aa9.94□□□□□ -0.82
LRRC28-206ENST00000558471 DNHD1Q96M86 4753 aa9.93□□□□□ -0.82
LRRC28-206ENST00000558471 IGKV1D-13A0A0B4J2D9 117 aa9.93□□□□□ -0.82
LRRC28-206ENST00000558471 NCBP2LA6PVI3 153 aaKnown RBP9.93□□□□□ -0.82
LRRC28-206ENST00000558471 M0QZK8 103 aa9.93□□□□□ -0.82
LRRC28-206ENST00000558471 ZNF701M0R085 212 aaPredicted RBP9.93□□□□□ -0.82
LRRC28-206ENST00000558471 M0R1X1 148 aa9.93□□□□□ -0.82
LRRC28-206ENST00000558471 FGF16O43320 207 aa9.93□□□□□ -0.82
LRRC28-206ENST00000558471 TUSC2O75896 110 aa9.93□□□□□ -0.82
LRRC28-206ENST00000558471 OR5H8P0DN80 308 aa9.93□□□□□ -0.82
LRRC28-206ENST00000558471 IGKV1-13P0DP09 117 aa9.93□□□□□ -0.82
LRRC28-206ENST00000558471 FCGR2CP31995 323 aa9.93□□□□□ -0.82
LRRC28-206ENST00000558471 TMEM95Q3KNT9 176 aa9.93□□□□□ -0.82
LRRC28-206ENST00000558471 FAM131AQ6UXB0 335 aa9.93□□□□□ -0.82
LRRC28-206ENST00000558471 Q8N9W7 124 aa9.93□□□□□ -0.82
LRRC28-206ENST00000558471 OR5AN1Q8NGI8 311 aa9.93□□□□□ -0.82
LRRC28-206ENST00000558471 MCFD2Q8NI22 146 aa9.93□□□□□ -0.82
LRRC28-206ENST00000558471 DCUN1D5Q9BTE7 237 aa9.93□□□□□ -0.82
LRRC28-206ENST00000558471 C6orf62Q9GZU0 229 aaPredicted RBP9.93□□□□□ -0.82
LRRC28-206ENST00000558471 OR5H14A6NHG9 310 aa9.92□□□□□ -0.82
LRRC28-206ENST00000558471 H0YJW9 148 aa9.92□□□□□ -0.82
LRRC28-206ENST00000558471 SULT1C2O00338 296 aa9.92□□□□□ -0.82
LRRC28-206ENST00000558471 TPPPO94811 219 aa9.92□□□□□ -0.82
LRRC28-206ENST00000558471 PMP2P02689 132 aa9.92□□□□□ -0.82
LRRC28-206ENST00000558471 AADACP22760 399 aa9.92□□□□□ -0.82
LRRC28-206ENST00000558471 CNTFRP26992 372 aa9.92□□□□□ -0.82
LRRC28-206ENST00000558471 MC5RP33032 325 aa9.92□□□□□ -0.82
LRRC28-206ENST00000558471 RFX2P48378 723 aa9.92□□□□□ -0.82
LRRC28-206ENST00000558471 LUMP51884 338 aaPredicted RBP9.92□□□□□ -0.82
LRRC28-206ENST00000558471 ACTBP60709 375 aa9.92□□□□□ -0.82
LRRC28-206ENST00000558471 CDK10Q15131 360 aa9.92□□□□□ -0.82
LRRC28-206ENST00000558471 ARSJQ5FYB0 599 aaPredicted RBP9.92□□□□□ -0.82
LRRC28-206ENST00000558471 RNASE12Q5GAN4 147 aaKnown RBP9.92□□□□□ -0.82
LRRC28-206ENST00000558471 C9orf152Q5JTZ5 239 aa9.92□□□□□ -0.82
LRRC28-206ENST00000558471 SHISA2Q6UWI4 295 aa9.92□□□□□ -0.82
LRRC28-206ENST00000558471 OR8H1Q8NGG4 311 aa9.92□□□□□ -0.82
LRRC28-206ENST00000558471 DIRAS2Q96HU8 199 aa9.92□□□□□ -0.82
LRRC28-206ENST00000558471 WASHC3Q9Y3C0 194 aa9.92□□□□□ -0.82
LRRC28-206ENST00000558471 DPPA5A6NC42 116 aa9.91□□□□□ -0.82
LRRC28-206ENST00000558471 H7C2Y5 167 aa9.91□□□□□ -0.82
LRRC28-206ENST00000558471 IGLV2-14P01704 120 aa9.91□□□□□ -0.82
LRRC28-206ENST00000558471 VSIG10L2P0DP72 767 aa9.91□□□□□ -0.82
LRRC28-206ENST00000558471 HLA-DMAP28067 261 aa9.91□□□□□ -0.82
LRRC28-206ENST00000558471 TNFSF8P32971 234 aa9.91□□□□□ -0.82
LRRC28-206ENST00000558471 VDAC2P45880 294 aaPredicted RBP9.91□□□□□ -0.82
LRRC28-206ENST00000558471 OVCH2Q7RTZ1 564 aa9.91□□□□□ -0.82
LRRC28-206ENST00000558471 KLHDC1Q8N7A1 406 aa9.91□□□□□ -0.82
LRRC28-206ENST00000558471 ZNF645Q8N7E2 425 aa9.91□□□□□ -0.82
LRRC28-206ENST00000558471 OR52I2Q8NH67 350 aa9.91□□□□□ -0.82
LRRC28-206ENST00000558471 GIMAP1Q8WWP7 306 aa9.91□□□□□ -0.82
LRRC28-206ENST00000558471 EHFQ9NZC4 300 aa9.91□□□□□ -0.82
LRRC28-206ENST00000558471 KLK11Q9UBX7 282 aa9.91□□□□□ -0.82
LRRC28-206ENST00000558471 PLXNB1O43157 2135 aa9.91□□□□□ -0.82
LRRC28-206ENST00000558471 LINC01548A6NM66 108 aa9.9□□□□□ -0.82
LRRC28-206ENST00000558471 PPYP01298 95 aa9.9□□□□□ -0.82
LRRC28-206ENST00000558471 DUTP33316 252 aaKnown RBP9.9□□□□□ -0.82
LRRC28-206ENST00000558471 RCVRNP35243 200 aa9.9□□□□□ -0.82
LRRC28-206ENST00000558471 HRH1P35367 487 aa9.9□□□□□ -0.82
LRRC28-206ENST00000558471 TAS2R46P59540 309 aa9.9□□□□□ -0.82
LRRC28-206ENST00000558471 DYRK1AQ13627 763 aa9.9□□□□□ -0.82
LRRC28-206ENST00000558471 MMDQ15546 238 aa9.9□□□□□ -0.82
LRRC28-206ENST00000558471 ZNF660Q6AZW8 331 aaPredicted RBP9.9□□□□□ -0.82
LRRC28-206ENST00000558471 DHRS11Q6UWP2 260 aa9.9□□□□□ -0.82
LRRC28-206ENST00000558471 FAM71E2Q8N5Q1 922 aa9.9□□□□□ -0.82
LRRC28-206ENST00000558471 NPBQ8NG41 125 aa9.9□□□□□ -0.82
LRRC28-206ENST00000558471 OR5H2Q8NGV7 314 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms