RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 OPN3Q9H1Y3 402 aaPredicted RBP13.13□□□□□ -0.31
AP4E1-202ENST00000558439 TRBV23-1A0A0A0MS06 115 aa13.13□□□□□ -0.31
AP4E1-202ENST00000558439 F6UZH7 168 aa13.13□□□□□ -0.31
AP4E1-202ENST00000558439 TMEM42Q69YG0 159 aa13.13□□□□□ -0.31
AP4E1-202ENST00000558439 INO80CQ6PI98 192 aaPredicted RBP13.13□□□□□ -0.31
AP4E1-202ENST00000558439 TMEM171Q8WVE6 324 aa13.13□□□□□ -0.31
AP4E1-202ENST00000558439 LEAP2Q969E1 77 aa13.13□□□□□ -0.31
AP4E1-202ENST00000558439 C11orf94C9JXX5 98 aa13.12□□□□□ -0.31
AP4E1-202ENST00000558439 EGR1P18146 543 aa13.12□□□□□ -0.31
AP4E1-202ENST00000558439 BAGE3Q86Y29 109 aa13.12□□□□□ -0.31
AP4E1-202ENST00000558439 BAGE2Q86Y30 109 aa13.12□□□□□ -0.31
AP4E1-202ENST00000558439 VKORC1L1Q8N0U8 176 aa13.12□□□□□ -0.31
AP4E1-202ENST00000558439 GPR61Q9BZJ8 451 aa13.12□□□□□ -0.31
AP4E1-202ENST00000558439 SRP19P09132 144 aaKnown RBP13.12□□□□□ -0.31
AP4E1-202ENST00000558439 RPS23P62266 143 aaKnown RBP13.12□□□□□ -0.31
AP4E1-202ENST00000558439 PNRC1Q12796 327 aaPredicted RBP13.12□□□□□ -0.31
AP4E1-202ENST00000558439 HABP2Q14520 560 aaPredicted RBP13.12□□□□□ -0.31
AP4E1-202ENST00000558439 PLGLAQ15195 96 aa13.12□□□□□ -0.31
AP4E1-202ENST00000558439 FAM78BQ5VT40 261 aa13.12□□□□□ -0.31
AP4E1-202ENST00000558439 ABHD5Q8WTS1 349 aa13.12□□□□□ -0.31
AP4E1-202ENST00000558439 K7N7A8 449 aa13.12□□□□□ -0.31
AP4E1-202ENST00000558439 WNT5AP41221 380 aa13.12□□□□□ -0.31
AP4E1-202ENST00000558439 PSG7Q13046 419 aa13.12□□□□□ -0.31
AP4E1-202ENST00000558439 NEIL1Q96FI4 390 aaPredicted RBP13.12□□□□□ -0.31
AP4E1-202ENST00000558439 RCC1LQ96I51 464 aaKnown RBP13.12□□□□□ -0.31
AP4E1-202ENST00000558439 DECR2Q9NUI1 292 aa13.12□□□□□ -0.31
AP4E1-202ENST00000558439 NAT8Q9UHE5 227 aa13.12□□□□□ -0.31
AP4E1-202ENST00000558439 PRDX2P32119 198 aa13.11□□□□□ -0.31
AP4E1-202ENST00000558439 TNFRSF9Q07011 255 aa13.11□□□□□ -0.31
AP4E1-202ENST00000558439 C20orf204Q6ZNR8 217 aa13.11□□□□□ -0.31
AP4E1-202ENST00000558439 CRIM1Q9NZV1 1036 aa13.11□□□□□ -0.31
AP4E1-202ENST00000558439 TRIOO75962 3097 aa13.11□□□□□ -0.31
AP4E1-202ENST00000558439 TRGV10A0A0A0MS01 117 aa13.11□□□□□ -0.31
AP4E1-202ENST00000558439 XKRY2A2RUG3 117 aa13.11□□□□□ -0.31
AP4E1-202ENST00000558439 SERF2P84101 59 aa13.11□□□□□ -0.31
AP4E1-202ENST00000558439 ID3Q02535 119 aa13.11□□□□□ -0.31
AP4E1-202ENST00000558439 FOXL2NBQ6ZUU3 175 aa13.11□□□□□ -0.31
AP4E1-202ENST00000558439 LRTM2Q8N967 370 aa13.11□□□□□ -0.31
AP4E1-202ENST00000558439 ZDHHC16Q969W1 377 aa13.11□□□□□ -0.31
AP4E1-202ENST00000558439 SMDT1Q9H4I9 107 aa13.11□□□□□ -0.31
AP4E1-202ENST00000558439 CD55P08174 381 aa13.11□□□□□ -0.31
AP4E1-202ENST00000558439 SLC35E3Q7Z769 313 aa13.11□□□□□ -0.31
AP4E1-202ENST00000558439 ANAPC10Q9UM13 185 aa13.11□□□□□ -0.31
AP4E1-202ENST00000558439 C12orf77C9JDV5 145 aa13.1□□□□□ -0.31
AP4E1-202ENST00000558439 LYL1P12980 280 aa13.1□□□□□ -0.31
AP4E1-202ENST00000558439 BCL2L2Q92843 193 aaPredicted RBP13.1□□□□□ -0.31
AP4E1-202ENST00000558439 ACY3Q96HD9 319 aa13.1□□□□□ -0.31
AP4E1-202ENST00000558439 SEC14L6B5MCN3 397 aa13.1□□□□□ -0.31
AP4E1-202ENST00000558439 SP9P0CG40 484 aa13.1□□□□□ -0.31
AP4E1-202ENST00000558439 VWA1Q6PCB0 445 aa13.1□□□□□ -0.31
AP4E1-202ENST00000558439 USF3Q68DE3 2245 aa13.1□□□□□ -0.31
AP4E1-202ENST00000558439 COL6A6A6NMZ7 2263 aa13.1□□□□□ -0.31
AP4E1-202ENST00000558439 PGA5P0DJD9 388 aa13.1□□□□□ -0.31
AP4E1-202ENST00000558439 MPV17P39210 176 aa13.1□□□□□ -0.31
AP4E1-202ENST00000558439 KLF3P57682 345 aaPredicted RBP13.1□□□□□ -0.31
AP4E1-202ENST00000558439 MEF2BQ02080 365 aaPredicted RBP13.1□□□□□ -0.31
AP4E1-202ENST00000558439 ATP6V1FQ16864 119 aa13.1□□□□□ -0.31
AP4E1-202ENST00000558439 ZNF383Q8NA42 475 aa13.1□□□□□ -0.31
AP4E1-202ENST00000558439 FDCSPQ8NFU4 85 aa13.1□□□□□ -0.31
AP4E1-202ENST00000558439 TRAV38-1A0A0B4J264 116 aa13.1□□□□□ -0.31
AP4E1-202ENST00000558439 HERPUD1Q15011 391 aa13.1□□□□□ -0.31
AP4E1-202ENST00000558439 OR10A7Q8NGE5 316 aa13.1□□□□□ -0.31
AP4E1-202ENST00000558439 COMMD5Q9GZQ3 224 aa13.1□□□□□ -0.31
AP4E1-202ENST00000558439 VSIRQ9H7M9 311 aa13.1□□□□□ -0.31
AP4E1-202ENST00000558439 CTXND1A0A1B0GTU2 59 aa13.09□□□□□ -0.31
AP4E1-202ENST00000558439 KLK10O43240 276 aa13.09□□□□□ -0.31
AP4E1-202ENST00000558439 C16orf82Q7Z2V1 217 aa13.09□□□□□ -0.31
AP4E1-202ENST00000558439 IL22RA2Q969J5 263 aa13.09□□□□□ -0.31
AP4E1-202ENST00000558439 RAB24Q969Q5 203 aa13.09□□□□□ -0.31
AP4E1-202ENST00000558439 SIRT7Q9NRC8 400 aa13.09□□□□□ -0.31
AP4E1-202ENST00000558439 A0A0G2JRQ6 117 aa13.09□□□□□ -0.31
AP4E1-202ENST00000558439 SMPD2O60906 423 aa13.09□□□□□ -0.31
AP4E1-202ENST00000558439 ACAA1P09110 424 aaPredicted RBP13.09□□□□□ -0.31
AP4E1-202ENST00000558439 SNRPCP09234 159 aaKnown RBP13.09□□□□□ -0.31
AP4E1-202ENST00000558439 BHLHA15Q7RTS1 189 aaPredicted RBP13.09□□□□□ -0.31
AP4E1-202ENST00000558439 ZDHHC11Q9H8X9 412 aa13.09□□□□□ -0.31
AP4E1-202ENST00000558439 FUT9Q9Y231 359 aa13.09□□□□□ -0.31
AP4E1-202ENST00000558439 EML6Q6ZMW3 1958 aa13.09□□□□□ -0.31
AP4E1-202ENST00000558439 C17orf98A8MV24 154 aa13.09□□□□□ -0.31
AP4E1-202ENST00000558439 CLDN14O95500 239 aa13.09□□□□□ -0.31
AP4E1-202ENST00000558439 NAPSAO96009 420 aa13.09□□□□□ -0.31
AP4E1-202ENST00000558439 ZNF645Q8N7E2 425 aa13.09□□□□□ -0.31
AP4E1-202ENST00000558439 OR8G5Q8NG78 346 aa13.09□□□□□ -0.31
AP4E1-202ENST00000558439 OR2T10Q8NGZ9 312 aa13.09□□□□□ -0.31
AP4E1-202ENST00000558439 GZMHP20718 246 aa13.08□□□□□ -0.32
AP4E1-202ENST00000558439 RBMXL3Q8N7X1 1067 aaKnown RBP13.08□□□□□ -0.32
AP4E1-202ENST00000558439 WIPI2Q9Y4P8 454 aa13.08□□□□□ -0.32
AP4E1-202ENST00000558439 RAMP3O60896 148 aa13.08□□□□□ -0.32
AP4E1-202ENST00000558439 MRPS11P82912 194 aaKnown RBP13.08□□□□□ -0.32
AP4E1-202ENST00000558439 EML5Q05BV3 1969 aa13.08□□□□□ -0.32
AP4E1-202ENST00000558439 OR5G3P0C626 314 aa13.08□□□□□ -0.32
AP4E1-202ENST00000558439 FAM3BP58499 235 aaPredicted RBP13.08□□□□□ -0.32
AP4E1-202ENST00000558439 TNFAIP6P98066 277 aaPredicted RBP13.08□□□□□ -0.32
AP4E1-202ENST00000558439 HOXA4Q00056 320 aaPredicted RBP13.08□□□□□ -0.32
AP4E1-202ENST00000558439 NRN1LQ496H8 165 aa13.08□□□□□ -0.32
AP4E1-202ENST00000558439 ZNRF1Q8ND25 227 aa13.08□□□□□ -0.32
AP4E1-202ENST00000558439 OR10X1Q8NGY0 326 aa13.08□□□□□ -0.32
AP4E1-202ENST00000558439 KCNIP2Q9NS61 270 aa13.08□□□□□ -0.32
AP4E1-202ENST00000558439 RYDENQ9NUL5 291 aaKnown RBP13.08□□□□□ -0.32
AP4E1-202ENST00000558439 TRAPPC1Q9Y5R8 145 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms