RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 IFT46Q9NQC8 304 aa9.84□□□□□ -0.83
SMAD3-205ENST00000558428 SERTAD4Q9NUC0 356 aa9.84□□□□□ -0.83
SMAD3-205ENST00000558428 MRPS7Q9Y2R9 242 aaKnown RBP9.84□□□□□ -0.83
SMAD3-205ENST00000558428 CCDC160A6NGH7 325 aa9.83□□□□□ -0.84
SMAD3-205ENST00000558428 J3QRK9 145 aa9.83□□□□□ -0.84
SMAD3-205ENST00000558428 HLA-DQB1P01920 261 aa9.83□□□□□ -0.84
SMAD3-205ENST00000558428 CT45A6P0DMU7 189 aa9.83□□□□□ -0.84
SMAD3-205ENST00000558428 CT45A5P0DMU8 189 aa9.83□□□□□ -0.84
SMAD3-205ENST00000558428 CT45A7P0DMV0 189 aa9.83□□□□□ -0.84
SMAD3-205ENST00000558428 VSIG10L2P0DP72 767 aa9.83□□□□□ -0.84
SMAD3-205ENST00000558428 NFYAP23511 347 aaPredicted RBP9.83□□□□□ -0.84
SMAD3-205ENST00000558428 PRSS3P35030 304 aa9.83□□□□□ -0.84
SMAD3-205ENST00000558428 KRTAP10-3P60369 221 aa9.83□□□□□ -0.84
SMAD3-205ENST00000558428 FAM131AQ6UXB0 335 aa9.83□□□□□ -0.84
SMAD3-205ENST00000558428 GLDNQ6ZMI3 551 aaPredicted RBP9.83□□□□□ -0.84
SMAD3-205ENST00000558428 SNX29P2Q8IUI4 249 aa9.83□□□□□ -0.84
SMAD3-205ENST00000558428 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.83□□□□□ -0.84
SMAD3-205ENST00000558428 DYNC2LI1Q8TCX1 351 aa9.83□□□□□ -0.84
SMAD3-205ENST00000558428 CITED1Q99966 193 aa9.83□□□□□ -0.84
SMAD3-205ENST00000558428 CCDC59Q9P031 241 aaKnown RBP9.83□□□□□ -0.84
SMAD3-205ENST00000558428 CEPT1Q9Y6K0 416 aa9.83□□□□□ -0.84
SMAD3-205ENST00000558428 OR5H14A6NHG9 310 aa9.82□□□□□ -0.84
SMAD3-205ENST00000558428 M0R1X1 148 aa9.82□□□□□ -0.84
SMAD3-205ENST00000558428 RGS5O15539 181 aa9.82□□□□□ -0.84
SMAD3-205ENST00000558428 PROP1O75360 226 aa9.82□□□□□ -0.84
SMAD3-205ENST00000558428 ACTBP60709 375 aa9.82□□□□□ -0.84
SMAD3-205ENST00000558428 MMDQ15546 238 aa9.82□□□□□ -0.84
SMAD3-205ENST00000558428 Q8N9W7 124 aa9.82□□□□□ -0.84
SMAD3-205ENST00000558428 DRAXINQ8NBI3 349 aaPredicted RBP9.82□□□□□ -0.84
SMAD3-205ENST00000558428 SNAPC3Q92966 411 aa9.82□□□□□ -0.84
SMAD3-205ENST00000558428 NECAP2Q9NVZ3 263 aa9.82□□□□□ -0.84
SMAD3-205ENST00000558428 SDHAF2Q9NX18 166 aa9.82□□□□□ -0.84
SMAD3-205ENST00000558428 EXTL2Q9UBQ6 330 aa9.82□□□□□ -0.84
SMAD3-205ENST00000558428 GAB2Q9UQC2 676 aa9.82□□□□□ -0.84
SMAD3-205ENST00000558428 OR2W1Q9Y3N9 320 aa9.82□□□□□ -0.84
SMAD3-205ENST00000558428 TET2Q6N021 2002 aaPredicted RBP9.82□□□□□ -0.84
SMAD3-205ENST00000558428 H0YJW9 148 aa9.81□□□□□ -0.84
SMAD3-205ENST00000558428 H7C2Y5 167 aa9.81□□□□□ -0.84
SMAD3-205ENST00000558428 CTDSP2O14595 271 aa9.81□□□□□ -0.84
SMAD3-205ENST00000558428 PLXNB1O43157 2135 aa9.81□□□□□ -0.84
SMAD3-205ENST00000558428 MC5RP33032 325 aa9.81□□□□□ -0.84
SMAD3-205ENST00000558428 LUMP51884 338 aaPredicted RBP9.81□□□□□ -0.84
SMAD3-205ENST00000558428 F2RL1P55085 397 aa9.81□□□□□ -0.84
SMAD3-205ENST00000558428 LINC00205P59089 165 aa9.81□□□□□ -0.84
SMAD3-205ENST00000558428 OR5AP2Q8NGF4 316 aa9.81□□□□□ -0.84
SMAD3-205ENST00000558428 OR8H1Q8NGG4 311 aa9.81□□□□□ -0.84
SMAD3-205ENST00000558428 OR5AN1Q8NGI8 311 aa9.81□□□□□ -0.84
SMAD3-205ENST00000558428 C5orf30Q96GV9 206 aa9.81□□□□□ -0.84
SMAD3-205ENST00000558428 RASL11BQ9BPW5 248 aa9.81□□□□□ -0.84
SMAD3-205ENST00000558428 PLSCR3Q9NRY6 295 aa9.81□□□□□ -0.84
SMAD3-205ENST00000558428 LIN7CQ9NUP9 197 aaKnown RBP9.81□□□□□ -0.84
SMAD3-205ENST00000558428 ADAM30Q9UKF2 790 aa9.81□□□□□ -0.84
SMAD3-205ENST00000558428 WASHC3Q9Y3C0 194 aa9.81□□□□□ -0.84
SMAD3-205ENST00000558428 CMYA5Q8N3K9 4069 aa9.81□□□□□ -0.84
SMAD3-205ENST00000558428 WNK1Q9H4A3 2382 aa9.8□□□□□ -0.84
SMAD3-205ENST00000558428 TUSC2O75896 110 aa9.8□□□□□ -0.84
SMAD3-205ENST00000558428 APOA2P02652 100 aa9.8□□□□□ -0.84
SMAD3-205ENST00000558428 OR5H8P0DN80 308 aa9.8□□□□□ -0.84
SMAD3-205ENST00000558428 CNTFRP26992 372 aa9.8□□□□□ -0.84
SMAD3-205ENST00000558428 FCGR2CP31995 323 aa9.8□□□□□ -0.84
SMAD3-205ENST00000558428 CDK10Q15131 360 aa9.8□□□□□ -0.84
SMAD3-205ENST00000558428 LAX1Q8IWV1 398 aa9.8□□□□□ -0.84
SMAD3-205ENST00000558428 FAM71E2Q8N5Q1 922 aa9.8□□□□□ -0.84
SMAD3-205ENST00000558428 ZNF645Q8N7E2 425 aa9.8□□□□□ -0.84
SMAD3-205ENST00000558428 C11orf44Q8N8P7 122 aa9.8□□□□□ -0.84
SMAD3-205ENST00000558428 ZNF383Q8NA42 475 aa9.8□□□□□ -0.84
SMAD3-205ENST00000558428 GPX8Q8TED1 209 aa9.8□□□□□ -0.84
SMAD3-205ENST00000558428 RITA1Q96K30 269 aa9.8□□□□□ -0.84
SMAD3-205ENST00000558428 WNT10AQ9GZT5 417 aa9.8□□□□□ -0.84
SMAD3-205ENST00000558428 C6orf62Q9GZU0 229 aaPredicted RBP9.8□□□□□ -0.84
SMAD3-205ENST00000558428 MIXL1Q9H2W2 232 aa9.8□□□□□ -0.84
SMAD3-205ENST00000558428 SCPEP1Q9HB40 452 aa9.8□□□□□ -0.84
SMAD3-205ENST00000558428 ANAPC10Q9UM13 185 aa9.8□□□□□ -0.84
SMAD3-205ENST00000558428 IGKV1D-13A0A0B4J2D9 117 aa9.79□□□□□ -0.84
SMAD3-205ENST00000558428 SULT1C2O00338 296 aa9.79□□□□□ -0.84
SMAD3-205ENST00000558428 NBR2O15453 112 aa9.79□□□□□ -0.84
SMAD3-205ENST00000558428 RBBP9O75884 186 aa9.79□□□□□ -0.84
SMAD3-205ENST00000558428 SLC22A5O76082 557 aa9.79□□□□□ -0.84
SMAD3-205ENST00000558428 IGKV1-13P0DP09 117 aa9.79□□□□□ -0.84
SMAD3-205ENST00000558428 NAT1P18440 290 aa9.79□□□□□ -0.84
SMAD3-205ENST00000558428 AADACP22760 399 aa9.79□□□□□ -0.84
SMAD3-205ENST00000558428 THBS3P49746 956 aa9.79□□□□□ -0.84
SMAD3-205ENST00000558428 TAS2R46P59540 309 aa9.79□□□□□ -0.84
SMAD3-205ENST00000558428 RNASE12Q5GAN4 147 aaKnown RBP9.79□□□□□ -0.84
SMAD3-205ENST00000558428 SLC35E3Q7Z769 313 aa9.79□□□□□ -0.84
SMAD3-205ENST00000558428 PDPNQ86YL7 162 aa9.79□□□□□ -0.84
SMAD3-205ENST00000558428 OR5H2Q8NGV7 314 aa9.79□□□□□ -0.84
SMAD3-205ENST00000558428 SGMS2Q8NHU3 365 aa9.79□□□□□ -0.84
SMAD3-205ENST00000558428 SLIRPQ9GZT3 109 aaKnown RBP9.79□□□□□ -0.84
SMAD3-205ENST00000558428 RBM38Q9H0Z9 239 aaKnown RBP9.79□□□□□ -0.84
SMAD3-205ENST00000558428 SLC35D1Q9NTN3 355 aa9.79□□□□□ -0.84
SMAD3-205ENST00000558428 EHFQ9NZC4 300 aa9.79□□□□□ -0.84
SMAD3-205ENST00000558428 KIAA1456Q9P272 454 aa9.79□□□□□ -0.84
SMAD3-205ENST00000558428 RSL24D1Q9UHA3 163 aaKnown RBP9.79□□□□□ -0.84
SMAD3-205ENST00000558428 FBXO24O75426 580 aa9.78□□□□□ -0.84
SMAD3-205ENST00000558428 NDUFA3O95167 84 aa9.78□□□□□ -0.84
SMAD3-205ENST00000558428 PPYP01298 95 aa9.78□□□□□ -0.84
SMAD3-205ENST00000558428 IGHG2P01859 326 aa9.78□□□□□ -0.84
SMAD3-205ENST00000558428 PMP2P02689 132 aa9.78□□□□□ -0.84
SMAD3-205ENST00000558428 IGKV1-16P04430 117 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms