RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 LY6G6FQ5SQ64 297 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 OR4C13Q8NGP0 309 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 IGHV3-21A0A0B4J1V1 117 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 MPV17L2Q567V2 206 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 SFTPA2Q8IWL1 248 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 SFTPA1Q8IWL2 248 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 RNASE8Q8TDE3 154 aaKnown RBP3.19□□□□□ -1.9
ATXN3-248ENST00000558190 ST8SIA1Q92185 356 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 NDFIP1Q9BT67 221 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 MS4A6AQ9H2W1 248 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 CD163L1Q9NR16 1453 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 B5MCH6 92 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 CTGFP29279 349 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 TNFRSF14Q92956 283 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 LOC105371242A0A075B767 164 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 PPIAL4CA0A0B4J2A2 164 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 GDF9O60383 454 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 IGLV3-25P01717 112 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 PPIAL4GP0DN37 164 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 HERVK_113P61574 105 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 BHLHA15Q7RTS1 189 aaPredicted RBP3.19□□□□□ -1.9
ATXN3-248ENST00000558190 OR4A5Q8NH83 315 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 SPSB1Q96BD6 273 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 CSTL1Q9H114 145 aa3.19□□□□□ -1.9
ATXN3-248ENST00000558190 TRBV24-1A0A075B6N3 115 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 hDV102S1A0JD36 115 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 COL8A1P27658 744 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 ZNF83P51522 516 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 ZNF56Q15929 161 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 RFLNBQ8N5W9 214 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 STRADBQ9C0K7 418 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 ATP23Q9Y6H3 246 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 RPL36A-HNRNPH2H7BZ11 118 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 IGHV3-48P01763 117 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 PFN1P07737 140 aaKnown RBP3.18□□□□□ -1.9
ATXN3-248ENST00000558190 PRTN3P24158 256 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 TCF23Q7RTU1 214 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 FER1L5A0AVI2 2057 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 A0A0G2JK05 382 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 LINC01551Q86U37 167 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 IGKV1D-16P01601 117 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 CXCL12P48061 93 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 TM4SF20Q53R12 229 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 RNFT1Q5M7Z0 435 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 OR1K1Q8NGR3 316 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 PSMG3Q9BT73 122 aaPredicted RBP3.18□□□□□ -1.9
ATXN3-248ENST00000558190 SELENOTP62341 195 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 MLANAQ16655 118 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 OR4D5Q8NGN0 318 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 TMEM45BQ96B21 275 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 DUOX2Q9NRD8 1548 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 IGHV3-43A0A0B4J1X8 118 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 A6NCN8 305 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 KLRC4-KLRK1H3BQV0 150 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 J3QR06 171 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 IGHV3-43DP0DP04 118 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 GNB2P62879 340 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 Q6ZVH6 145 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 ZNF385AQ96PM9 386 aaKnown RBP3.18□□□□□ -1.9
ATXN3-248ENST00000558190 HS3ST3B1Q9Y662 390 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 IGHV4-34P06331 123 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 BVES-AS1Q5T3Y7 98 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 OR8G5Q8NG78 346 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 MS4A5Q9H3V2 200 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 DNMT1P26358 1616 aaKnown RBP3.18□□□□□ -1.9
ATXN3-248ENST00000558190 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.18□□□□□ -1.9
ATXN3-248ENST00000558190 C9orf118A6NHY6 69 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 PRR31Q5SQ13 230 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 ATG4DQ86TL0 474 aaPredicted RBP3.18□□□□□ -1.9
ATXN3-248ENST00000558190 MRGPRFQ96AM1 343 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 SNRNP40Q96DI7 357 aaKnown RBP3.18□□□□□ -1.9
ATXN3-248ENST00000558190 KRTCAP3Q53RY4 240 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 AMELYQ99218 206 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 PRDM13Q9H4Q3 707 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 TRGV10A0A0A0MS01 117 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 HCP5Q6MZN7 132 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 PRELID3AQ96N28 172 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 R4GN57 208 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 CROCC2H7BZ55 1655 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 MROH2AA6NES4 1674 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 C1QTNF9P0C862 333 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 YPEL5P62699 121 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 HGFACQ04756 655 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 FMODQ06828 376 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 LRRIQ1Q96JM4 1722 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 A0A1W2PS18 150 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 hADV38S2A0JD32 116 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 TNFSF14O43557 240 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 NBEAP1P0C6P0 100 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 THAP10Q9P2Z0 257 aaPredicted RBP3.18□□□□□ -1.9
ATXN3-248ENST00000558190 PRSS12P56730 875 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 ACTL10Q5JWF8 245 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 TRBV9A0A0B4J1U6 114 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 PSG3Q16557 428 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 STPG3Q8N7X2 389 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 C20orf144Q9BQM9 153 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 TMEM250H0YL14 139 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 BGLAPP02818 100 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 SRSF4Q08170 494 aaKnown RBP3.18□□□□□ -1.9
ATXN3-248ENST00000558190 CD99L2Q8TCZ2 262 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms