RNA–Protein interactions for RNA: ENST00000557933.5

LDLR-205, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LDLR, Length 2,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-205ENST00000557933 CDIPTO14735 213 aa10.42□□□□□ -0.74
LDLR-205ENST00000557933 KIR2DS4P43632 304 aa10.42□□□□□ -0.74
LDLR-205ENST00000557933 ATP5G3P48201 142 aa10.42□□□□□ -0.74
LDLR-205ENST00000557933 TAS2R60P59551 318 aa10.42□□□□□ -0.74
LDLR-205ENST00000557933 KIR2DS1Q14954 304 aa10.42□□□□□ -0.74
LDLR-205ENST00000557933 ZNF826PQ6ZT77 177 aa10.42□□□□□ -0.74
LDLR-205ENST00000557933 FAM185AQ8N0U4 392 aa10.42□□□□□ -0.74
LDLR-205ENST00000557933 FGFRL1Q8N441 504 aa10.42□□□□□ -0.74
LDLR-205ENST00000557933 FZR1Q9UM11 496 aa10.42□□□□□ -0.74
LDLR-205ENST00000557933 DEGS1O15121 323 aa10.42□□□□□ -0.74
LDLR-205ENST00000557933 OPN1MWP04001 364 aa10.42□□□□□ -0.74
LDLR-205ENST00000557933 PFN1P07737 140 aaKnown RBP10.42□□□□□ -0.74
LDLR-205ENST00000557933 OPN1MW2P0DN77 364 aa10.42□□□□□ -0.74
LDLR-205ENST00000557933 OPN1MW3P0DN78 364 aa10.42□□□□□ -0.74
LDLR-205ENST00000557933 FGF7P21781 194 aa10.42□□□□□ -0.74
LDLR-205ENST00000557933 NPPCP23582 126 aa10.42□□□□□ -0.74
LDLR-205ENST00000557933 EDDM3BP56851 147 aa10.42□□□□□ -0.74
LDLR-205ENST00000557933 RPL30P62888 115 aaKnown RBP10.42□□□□□ -0.74
LDLR-205ENST00000557933 JOSD1Q15040 202 aaPredicted RBP10.42□□□□□ -0.74
LDLR-205ENST00000557933 FFAR4Q5NUL3 377 aa10.42□□□□□ -0.74
LDLR-205ENST00000557933 TCEAL6Q6IPX3 200 aa10.42□□□□□ -0.74
LDLR-205ENST00000557933 LINC00696Q6ZRV3 163 aa10.42□□□□□ -0.74
LDLR-205ENST00000557933 AGBL5Q8NDL9 886 aa10.42□□□□□ -0.74
LDLR-205ENST00000557933 SMDT1Q9H4I9 107 aa10.42□□□□□ -0.74
LDLR-205ENST00000557933 PLSCR2Q9NRY7 297 aa10.42□□□□□ -0.74
LDLR-205ENST00000557933 ZNF705FA8MVS1 300 aaPredicted RBP10.41□□□□□ -0.74
LDLR-205ENST00000557933 WNT9BO14905 357 aa10.41□□□□□ -0.74
LDLR-205ENST00000557933 CELA3BP08861 270 aa10.41□□□□□ -0.74
LDLR-205ENST00000557933 ZNF705DP0CH99 300 aaPredicted RBP10.41□□□□□ -0.74
LDLR-205ENST00000557933 ZNF705BP0CI00 300 aaPredicted RBP10.41□□□□□ -0.74
LDLR-205ENST00000557933 PAX5Q02548 391 aa10.41□□□□□ -0.74
LDLR-205ENST00000557933 PLA2G2CQ5R387 149 aa10.41□□□□□ -0.74
LDLR-205ENST00000557933 VKORC1L1Q8N0U8 176 aa10.41□□□□□ -0.74
LDLR-205ENST00000557933 FAM58AQ8N1B3 248 aa10.41□□□□□ -0.74
LDLR-205ENST00000557933 OR10G4Q8NGN3 311 aa10.41□□□□□ -0.74
LDLR-205ENST00000557933 OR10G9Q8NGN4 311 aa10.41□□□□□ -0.74
LDLR-205ENST00000557933 OR10G7Q8NGN6 311 aa10.41□□□□□ -0.74
LDLR-205ENST00000557933 REPIN1Q9BWE0 567 aaKnown RBP10.41□□□□□ -0.74
LDLR-205ENST00000557933 CDH20Q9HBT6 801 aa10.41□□□□□ -0.74
LDLR-205ENST00000557933 PKDREJQ9NTG1 2253 aa10.41□□□□□ -0.74
LDLR-205ENST00000557933 ZNF320A2RRD8 509 aa10.41□□□□□ -0.74
LDLR-205ENST00000557933 RND2P52198 227 aa10.41□□□□□ -0.74
LDLR-205ENST00000557933 CEACAM21Q3KPI0 293 aa10.41□□□□□ -0.74
LDLR-205ENST00000557933 Q6ZSR3 168 aa10.41□□□□□ -0.74
LDLR-205ENST00000557933 DRAM1Q8N682 238 aa10.41□□□□□ -0.74
LDLR-205ENST00000557933 OR52L2PQ8NGH6 319 aa10.41□□□□□ -0.74
LDLR-205ENST00000557933 RAB24Q969Q5 203 aa10.41□□□□□ -0.74
LDLR-205ENST00000557933 WDYHV1Q96HA8 205 aa10.41□□□□□ -0.74
LDLR-205ENST00000557933 ABHD14BQ96IU4 210 aa10.41□□□□□ -0.74
LDLR-205ENST00000557933 C1QTNF5Q9BXJ0 243 aa10.41□□□□□ -0.74
LDLR-205ENST00000557933 OR2D2Q9H210 308 aa10.41□□□□□ -0.74
LDLR-205ENST00000557933 GYPAP02724 150 aa10.4□□□□□ -0.74
LDLR-205ENST00000557933 GCH1P30793 250 aa10.4□□□□□ -0.74
LDLR-205ENST00000557933 LRRC75BQ2VPJ9 315 aa10.4□□□□□ -0.74
LDLR-205ENST00000557933 TMEM41BQ5BJD5 291 aa10.4□□□□□ -0.74
LDLR-205ENST00000557933 MRGPRGQ86SM5 289 aa10.4□□□□□ -0.74
LDLR-205ENST00000557933 RAB40CQ96S21 281 aa10.4□□□□□ -0.74
LDLR-205ENST00000557933 DCTN5Q9BTE1 182 aa10.4□□□□□ -0.74
LDLR-205ENST00000557933 SNHG12Q9BXW3 62 aa10.4□□□□□ -0.74
LDLR-205ENST00000557933 OR51I2Q9H344 312 aa10.4□□□□□ -0.74
LDLR-205ENST00000557933 IL36GQ9NZH8 169 aa10.4□□□□□ -0.74
LDLR-205ENST00000557933 NAT8Q9UHE5 227 aa10.4□□□□□ -0.74
LDLR-205ENST00000557933 IL17BQ9UHF5 180 aa10.4□□□□□ -0.74
LDLR-205ENST00000557933 TRBV24-1A0A075B6N3 115 aa10.4□□□□□ -0.74
LDLR-205ENST00000557933 S1PR2O95136 353 aa10.4□□□□□ -0.74
LDLR-205ENST00000557933 NDUFB4O95168 129 aa10.4□□□□□ -0.74
LDLR-205ENST00000557933 CEACAM1P13688 526 aa10.4□□□□□ -0.74
LDLR-205ENST00000557933 SLC35B1P78383 322 aa10.4□□□□□ -0.74
LDLR-205ENST00000557933 PPIAL4AQ9Y536 164 aa10.4□□□□□ -0.74
LDLR-205ENST00000557933 COL27A1Q8IZC6 1860 aaPredicted RBP10.4□□□□□ -0.74
LDLR-205ENST00000557933 MT-CO3P00414 261 aa10.4□□□□□ -0.75
LDLR-205ENST00000557933 S100GP29377 79 aa10.4□□□□□ -0.75
LDLR-205ENST00000557933 MAGEA5P43359 124 aa10.4□□□□□ -0.75
LDLR-205ENST00000557933 HBG1P69891 147 aa10.4□□□□□ -0.75
LDLR-205ENST00000557933 HBG2P69892 147 aa10.4□□□□□ -0.75
LDLR-205ENST00000557933 ZNF705AQ6ZN79 300 aaPredicted RBP10.4□□□□□ -0.75
LDLR-205ENST00000557933 SRD5A3Q9H8P0 318 aa10.4□□□□□ -0.75
LDLR-205ENST00000557933 PIEZO2Q9H5I5 2752 aa10.39□□□□□ -0.75
LDLR-205ENST00000557933 PCNX1Q96RV3 2341 aa10.39□□□□□ -0.75
LDLR-205ENST00000557933 PLCE1Q9P212 2302 aa10.39□□□□□ -0.75
LDLR-205ENST00000557933 DVL1O14640 695 aa10.39□□□□□ -0.75
LDLR-205ENST00000557933 OR2H2O95918 312 aa10.39□□□□□ -0.75
LDLR-205ENST00000557933 OR3A1P47881 315 aa10.39□□□□□ -0.75
LDLR-205ENST00000557933 PSMB3P49720 205 aa10.39□□□□□ -0.75
LDLR-205ENST00000557933 PCBD1P61457 104 aa10.39□□□□□ -0.75
LDLR-205ENST00000557933 AESQ08117 197 aa10.39□□□□□ -0.75
LDLR-205ENST00000557933 FOXO1Q12778 655 aa10.39□□□□□ -0.75
LDLR-205ENST00000557933 TMEM9BQ9NQ34 198 aa10.39□□□□□ -0.75
LDLR-205ENST00000557933 C17orf98A8MV24 154 aa10.39□□□□□ -0.75
LDLR-205ENST00000557933 F2Z2F3 143 aa10.39□□□□□ -0.75
LDLR-205ENST00000557933 KBTBD11O94819 623 aa10.39□□□□□ -0.75
LDLR-205ENST00000557933 FGF5P12034 268 aa10.39□□□□□ -0.75
LDLR-205ENST00000557933 FOLR3P41439 243 aa10.39□□□□□ -0.75
LDLR-205ENST00000557933 PNRC1Q12796 327 aaPredicted RBP10.39□□□□□ -0.75
LDLR-205ENST00000557933 NUFIP2Q7Z417 695 aaKnown RBP10.39□□□□□ -0.75
LDLR-205ENST00000557933 OR2T10Q8NGZ9 312 aa10.39□□□□□ -0.75
LDLR-205ENST00000557933 KIAA1549Q9HCM3 1950 aa10.39□□□□□ -0.75
LDLR-205ENST00000557933 RELNP78509 3460 aa10.38□□□□□ -0.75
LDLR-205ENST00000557933 PRR33A8MZF0 331 aa10.38□□□□□ -0.75
LDLR-205ENST00000557933 B4DEV8 164 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms