RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 ANAPC10Q9UM13 185 aa11.45□□□□□ -0.58
USP3-205ENST00000557884 MOB4Q9Y3A3 225 aa11.45□□□□□ -0.58
USP3-205ENST00000557884 IGKV1D-13A0A0B4J2D9 117 aa11.44□□□□□ -0.58
USP3-205ENST00000557884 CLPSL1A2RUU4 121 aa11.44□□□□□ -0.58
USP3-205ENST00000557884 M0R1X1 148 aa11.44□□□□□ -0.58
USP3-205ENST00000557884 PROP1O75360 226 aa11.44□□□□□ -0.58
USP3-205ENST00000557884 TSPAN9O75954 239 aa11.44□□□□□ -0.58
USP3-205ENST00000557884 PMP2P02689 132 aa11.44□□□□□ -0.58
USP3-205ENST00000557884 OR5H8P0DN80 308 aa11.44□□□□□ -0.58
USP3-205ENST00000557884 IGKV1-13P0DP09 117 aa11.44□□□□□ -0.58
USP3-205ENST00000557884 AADACP22760 399 aa11.44□□□□□ -0.58
USP3-205ENST00000557884 HLA-DMAP28067 261 aa11.44□□□□□ -0.58
USP3-205ENST00000557884 FCGR2CP31995 323 aa11.44□□□□□ -0.58
USP3-205ENST00000557884 COMPP49747 757 aaPredicted RBP11.44□□□□□ -0.58
USP3-205ENST00000557884 CDK10Q15131 360 aa11.44□□□□□ -0.58
USP3-205ENST00000557884 FAM131AQ6UXB0 335 aa11.44□□□□□ -0.58
USP3-205ENST00000557884 Q6ZS46 218 aa11.44□□□□□ -0.58
USP3-205ENST00000557884 C16orf82Q7Z2V1 217 aa11.44□□□□□ -0.58
USP3-205ENST00000557884 OR5AP2Q8NGF4 316 aa11.44□□□□□ -0.58
USP3-205ENST00000557884 OR2T10Q8NGZ9 312 aa11.44□□□□□ -0.58
USP3-205ENST00000557884 OR52I2Q8NH67 350 aa11.44□□□□□ -0.58
USP3-205ENST00000557884 LINC01006Q8NI28 216 aa11.44□□□□□ -0.58
USP3-205ENST00000557884 GHITMQ9H3K2 345 aa11.44□□□□□ -0.58
USP3-205ENST00000557884 SDHAF2Q9NX18 166 aa11.44□□□□□ -0.58
USP3-205ENST00000557884 EHFQ9NZC4 300 aa11.44□□□□□ -0.58
USP3-205ENST00000557884 OR2W1Q9Y3N9 320 aa11.44□□□□□ -0.58
USP3-205ENST00000557884 NCBP2LA6PVI3 153 aaKnown RBP11.43□□□□□ -0.58
USP3-205ENST00000557884 SULT1C2O00338 296 aa11.43□□□□□ -0.58
USP3-205ENST00000557884 TUSC2O75896 110 aa11.43□□□□□ -0.58
USP3-205ENST00000557884 MOSP00540 346 aa11.43□□□□□ -0.58
USP3-205ENST00000557884 NAT1P18440 290 aa11.43□□□□□ -0.58
USP3-205ENST00000557884 TNFSF8P32971 234 aa11.43□□□□□ -0.58
USP3-205ENST00000557884 RCVRNP35243 200 aa11.43□□□□□ -0.58
USP3-205ENST00000557884 RFX2P48378 723 aa11.43□□□□□ -0.58
USP3-205ENST00000557884 LUMP51884 338 aaPredicted RBP11.43□□□□□ -0.58
USP3-205ENST00000557884 IL18Q14116 193 aa11.43□□□□□ -0.58
USP3-205ENST00000557884 EBI3Q14213 229 aa11.43□□□□□ -0.58
USP3-205ENST00000557884 ABCA11PQ4W5N1 156 aa11.43□□□□□ -0.58
USP3-205ENST00000557884 ARSJQ5FYB0 599 aaPredicted RBP11.43□□□□□ -0.58
USP3-205ENST00000557884 C9orf152Q5JTZ5 239 aa11.43□□□□□ -0.58
USP3-205ENST00000557884 Q8N6K4 173 aa11.43□□□□□ -0.58
USP3-205ENST00000557884 C3orf56Q8N813 242 aa11.43□□□□□ -0.58
USP3-205ENST00000557884 OR5H2Q8NGV7 314 aa11.43□□□□□ -0.58
USP3-205ENST00000557884 SPATA3Q8NHX4 192 aa11.43□□□□□ -0.58
USP3-205ENST00000557884 DGCR14Q96DF8 476 aaKnown RBP11.43□□□□□ -0.58
USP3-205ENST00000557884 PRSS22Q9GZN4 317 aa11.43□□□□□ -0.58
USP3-205ENST00000557884 C16orf95Q9H693 158 aa11.43□□□□□ -0.58
USP3-205ENST00000557884 RANBP3Q9H6Z4 567 aaPredicted RBP11.43□□□□□ -0.58
USP3-205ENST00000557884 NDUFA13Q9P0J0 144 aa11.43□□□□□ -0.58
USP3-205ENST00000557884 RNF114Q9Y508 228 aa11.43□□□□□ -0.58
USP3-205ENST00000557884 H0YJW9 148 aa11.42□□□□□ -0.58
USP3-205ENST00000557884 H7C2Y5 167 aa11.42□□□□□ -0.58
USP3-205ENST00000557884 AMY1AP04745 511 aa11.42□□□□□ -0.58
USP3-205ENST00000557884 AMY2AP04746 511 aa11.42□□□□□ -0.58
USP3-205ENST00000557884 HRH1P35367 487 aa11.42□□□□□ -0.58
USP3-205ENST00000557884 TAS2R46P59540 309 aa11.42□□□□□ -0.58
USP3-205ENST00000557884 FXYD4P59646 89 aa11.42□□□□□ -0.58
USP3-205ENST00000557884 DGCR2P98153 550 aa11.42□□□□□ -0.58
USP3-205ENST00000557884 TMEM95Q3KNT9 176 aa11.42□□□□□ -0.58
USP3-205ENST00000557884 LYSMD2Q8IV50 215 aa11.42□□□□□ -0.58
USP3-205ENST00000557884 ZNF383Q8NA42 475 aa11.42□□□□□ -0.58
USP3-205ENST00000557884 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.42□□□□□ -0.58
USP3-205ENST00000557884 OR2T6Q8NHC8 308 aa11.42□□□□□ -0.58
USP3-205ENST00000557884 RITA1Q96K30 269 aa11.42□□□□□ -0.58
USP3-205ENST00000557884 KLK11Q9UBX7 282 aa11.42□□□□□ -0.58
USP3-205ENST00000557884 MMP24Q9Y5R2 645 aa11.42□□□□□ -0.58
USP3-205ENST00000557884 A0A1B0GUS0 222 aa11.41□□□□□ -0.58
USP3-205ENST00000557884 CNTFRP26992 372 aa11.41□□□□□ -0.58
USP3-205ENST00000557884 F2RL1P55085 397 aa11.41□□□□□ -0.58
USP3-205ENST00000557884 ACTBP60709 375 aa11.41□□□□□ -0.58
USP3-205ENST00000557884 C5orf56Q8N8D9 126 aa11.41□□□□□ -0.58
USP3-205ENST00000557884 C15orf40Q8WUR7 153 aa11.41□□□□□ -0.58
USP3-205ENST00000557884 SECTM1Q8WVN6 248 aa11.41□□□□□ -0.58
USP3-205ENST00000557884 MMP27Q9H306 513 aa11.41□□□□□ -0.58
USP3-205ENST00000557884 OR5H14A6NHG9 310 aa11.4□□□□□ -0.58
USP3-205ENST00000557884 M0QYG6 137 aa11.4□□□□□ -0.58
USP3-205ENST00000557884 M0QZK8 103 aa11.4□□□□□ -0.58
USP3-205ENST00000557884 RBBP9O75884 186 aa11.4□□□□□ -0.58
USP3-205ENST00000557884 TPPPO94811 219 aa11.4□□□□□ -0.58
USP3-205ENST00000557884 PPYP01298 95 aa11.4□□□□□ -0.58
USP3-205ENST00000557884 APOA2P02652 100 aa11.4□□□□□ -0.58
USP3-205ENST00000557884 VDAC2P45880 294 aaPredicted RBP11.4□□□□□ -0.58
USP3-205ENST00000557884 PROK1P58294 105 aa11.4□□□□□ -0.58
USP3-205ENST00000557884 HERV-K104P61576 105 aa11.4□□□□□ -0.58
USP3-205ENST00000557884 SRSF4Q08170 494 aaKnown RBP11.4□□□□□ -0.58
USP3-205ENST00000557884 DYRK1AQ13627 763 aa11.4□□□□□ -0.58
USP3-205ENST00000557884 MMDQ15546 238 aa11.4□□□□□ -0.58
USP3-205ENST00000557884 PYHIN1Q6K0P9 492 aa11.4□□□□□ -0.58
USP3-205ENST00000557884 C11orf88Q6PI97 169 aa11.4□□□□□ -0.58
USP3-205ENST00000557884 OVCH2Q7RTZ1 564 aa11.4□□□□□ -0.58
USP3-205ENST00000557884 TMEM17Q86X19 198 aa11.4□□□□□ -0.58
USP3-205ENST00000557884 ZNF645Q8N7E2 425 aa11.4□□□□□ -0.58
USP3-205ENST00000557884 OR5AN1Q8NGI8 311 aa11.4□□□□□ -0.58
USP3-205ENST00000557884 FCAMRQ8WWV6 532 aa11.4□□□□□ -0.58
USP3-205ENST00000557884 WFDC12Q8WWY7 111 aa11.4□□□□□ -0.58
USP3-205ENST00000557884 ZNF2Q9BSG1 426 aaPredicted RBP11.4□□□□□ -0.58
USP3-205ENST00000557884 PLSCR3Q9NRY6 295 aa11.4□□□□□ -0.58
USP3-205ENST00000557884 MTFP1Q9UDX5 166 aa11.4□□□□□ -0.58
USP3-205ENST00000557884 GAB2Q9UQC2 676 aa11.4□□□□□ -0.58
USP3-205ENST00000557884 WASHC3Q9Y3C0 194 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms