RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 K7EIL1 84 aa13.22□□□□□ -0.29
NEK9-211ENST00000557673 HSD17B6O14756 317 aa13.22□□□□□ -0.29
NEK9-211ENST00000557673 HSPA12AO43301 675 aa13.22□□□□□ -0.29
NEK9-211ENST00000557673 ZBTB25P24278 435 aa13.22□□□□□ -0.29
NEK9-211ENST00000557673 IL3RAP26951 378 aa13.22□□□□□ -0.29
NEK9-211ENST00000557673 CBX5P45973 191 aa13.22□□□□□ -0.29
NEK9-211ENST00000557673 HOGA1Q86XE5 327 aa13.22□□□□□ -0.29
NEK9-211ENST00000557673 SNX29P2Q8IUI4 249 aa13.22□□□□□ -0.29
NEK9-211ENST00000557673 BEST4Q8NFU0 473 aa13.22□□□□□ -0.29
NEK9-211ENST00000557673 SNAPC3Q92966 411 aa13.22□□□□□ -0.29
NEK9-211ENST00000557673 RPEQ96AT9 228 aa13.22□□□□□ -0.29
NEK9-211ENST00000557673 DGCR14Q96DF8 476 aaKnown RBP13.22□□□□□ -0.29
NEK9-211ENST00000557673 GPR61Q9BZJ8 451 aa13.22□□□□□ -0.29
NEK9-211ENST00000557673 TOLLIPQ9H0E2 274 aa13.22□□□□□ -0.29
NEK9-211ENST00000557673 ANXA10Q9UJ72 324 aa13.22□□□□□ -0.29
NEK9-211ENST00000557673 MRPS7Q9Y2R9 242 aaKnown RBP13.22□□□□□ -0.29
NEK9-211ENST00000557673 A3GALT2U3KPV4 340 aa13.22□□□□□ -0.29
NEK9-211ENST00000557673 TRBV6-7A0A0A0MS04 114 aa13.21□□□□□ -0.29
NEK9-211ENST00000557673 A0A1W2PPI3 338 aa13.21□□□□□ -0.29
NEK9-211ENST00000557673 MEIS3P1A6NDR6 274 aa13.21□□□□□ -0.29
NEK9-211ENST00000557673 ITGB1BP1O14713 200 aa13.21□□□□□ -0.29
NEK9-211ENST00000557673 BET1O15155 118 aa13.21□□□□□ -0.29
NEK9-211ENST00000557673 LPLP06858 475 aa13.21□□□□□ -0.29
NEK9-211ENST00000557673 BRS3P32247 399 aa13.21□□□□□ -0.29
NEK9-211ENST00000557673 PRSS3P35030 304 aa13.21□□□□□ -0.29
NEK9-211ENST00000557673 DIAPH2-AS1Q14236 149 aa13.21□□□□□ -0.29
NEK9-211ENST00000557673 TMEM95Q3KNT9 176 aa13.21□□□□□ -0.29
NEK9-211ENST00000557673 CCDC144NLQ6NUI1 221 aa13.21□□□□□ -0.29
NEK9-211ENST00000557673 GPX8Q8TED1 209 aa13.21□□□□□ -0.29
NEK9-211ENST00000557673 EDARADDQ8WWZ3 215 aa13.21□□□□□ -0.29
NEK9-211ENST00000557673 ST6GALNAC6Q969X2 333 aa13.21□□□□□ -0.29
NEK9-211ENST00000557673 SCPEP1Q9HB40 452 aa13.21□□□□□ -0.29
NEK9-211ENST00000557673 IFT46Q9NQC8 304 aa13.21□□□□□ -0.29
NEK9-211ENST00000557673 ST8SIA5O15466 376 aa13.2□□□□□ -0.3
NEK9-211ENST00000557673 TPPPO94811 219 aa13.2□□□□□ -0.3
NEK9-211ENST00000557673 CEACAM6P40199 344 aa13.2□□□□□ -0.3
NEK9-211ENST00000557673 RAB7AP51149 207 aa13.2□□□□□ -0.3
NEK9-211ENST00000557673 ARHGDIBP52566 201 aa13.2□□□□□ -0.3
NEK9-211ENST00000557673 ZNF816Q0VGE8 651 aaPredicted RBP13.2□□□□□ -0.3
NEK9-211ENST00000557673 DCTN2Q13561 401 aaKnown RBP13.2□□□□□ -0.3
NEK9-211ENST00000557673 ODF3L1Q8IXM7 274 aa13.2□□□□□ -0.3
NEK9-211ENST00000557673 OR4X2Q8NGF9 303 aa13.2□□□□□ -0.3
NEK9-211ENST00000557673 OR10J5Q8NHC4 309 aa13.2□□□□□ -0.3
NEK9-211ENST00000557673 DPF1Q92782 380 aa13.2□□□□□ -0.3
NEK9-211ENST00000557673 RDH8Q9NYR8 311 aa13.2□□□□□ -0.3
NEK9-211ENST00000557673 COL7A1Q02388 2944 aa13.19□□□□□ -0.3
NEK9-211ENST00000557673 SAA2-SAA4A0A096LPE2 208 aa13.19□□□□□ -0.3
NEK9-211ENST00000557673 SAA2P0DJI9 122 aaPredicted RBP13.19□□□□□ -0.3
NEK9-211ENST00000557673 CD69Q07108 199 aa13.19□□□□□ -0.3
NEK9-211ENST00000557673 H1FOOQ8IZA3 346 aaPredicted RBP13.19□□□□□ -0.3
NEK9-211ENST00000557673 OR8H3Q8N146 312 aa13.19□□□□□ -0.3
NEK9-211ENST00000557673 RTN4IP1Q8WWV3 396 aaPredicted RBP13.19□□□□□ -0.3
NEK9-211ENST00000557673 GINS4Q9BRT9 223 aa13.19□□□□□ -0.3
NEK9-211ENST00000557673 SLC25A33Q9BSK2 321 aa13.19□□□□□ -0.3
NEK9-211ENST00000557673 C11orf54Q9H0W9 315 aaPredicted RBP13.19□□□□□ -0.3
NEK9-211ENST00000557673 SULT1C2O00338 296 aa13.18□□□□□ -0.3
NEK9-211ENST00000557673 TXNL1O43396 289 aa13.18□□□□□ -0.3
NEK9-211ENST00000557673 LANCL1O43813 399 aa13.18□□□□□ -0.3
NEK9-211ENST00000557673 FCER2P06734 321 aa13.18□□□□□ -0.3
NEK9-211ENST00000557673 CTXN2P0C2S0 81 aa13.18□□□□□ -0.3
NEK9-211ENST00000557673 NAT1P18440 290 aa13.18□□□□□ -0.3
NEK9-211ENST00000557673 REG1BP48304 166 aa13.18□□□□□ -0.3
NEK9-211ENST00000557673 ARPC4P59998 168 aa13.18□□□□□ -0.3
NEK9-211ENST00000557673 C11orf87Q6NUJ2 197 aa13.18□□□□□ -0.3
NEK9-211ENST00000557673 FAM71F2Q6NXP2 309 aa13.18□□□□□ -0.3
NEK9-211ENST00000557673 ZNF833PQ6ZTB9 187 aa13.18□□□□□ -0.3
NEK9-211ENST00000557673 OR56B4Q8NH76 319 aa13.18□□□□□ -0.3
NEK9-211ENST00000557673 DIRAS2Q96HU8 199 aa13.18□□□□□ -0.3
NEK9-211ENST00000557673 WWC2-AS2Q96NR7 200 aa13.18□□□□□ -0.3
NEK9-211ENST00000557673 ABHD1Q96SE0 405 aa13.18□□□□□ -0.3
NEK9-211ENST00000557673 AGMATQ9BSE5 352 aa13.18□□□□□ -0.3
NEK9-211ENST00000557673 IGHV1-3A0A0C4DH29 117 aa13.17□□□□□ -0.3
NEK9-211ENST00000557673 A6NHS1 94 aa13.17□□□□□ -0.3
NEK9-211ENST00000557673 SH2D7A6NKC9 451 aaPredicted RBP13.17□□□□□ -0.3
NEK9-211ENST00000557673 OR2F2O95006 317 aa13.17□□□□□ -0.3
NEK9-211ENST00000557673 GAPDHP04406 335 aaKnown RBP13.17□□□□□ -0.3
NEK9-211ENST00000557673 TNFSF8P32971 234 aa13.17□□□□□ -0.3
NEK9-211ENST00000557673 RCVRNP35243 200 aa13.17□□□□□ -0.3
NEK9-211ENST00000557673 OR3A3P47888 321 aa13.17□□□□□ -0.3
NEK9-211ENST00000557673 EGFEM1PQ0D2K5 195 aa13.17□□□□□ -0.3
NEK9-211ENST00000557673 RNASE12Q5GAN4 147 aaKnown RBP13.17□□□□□ -0.3
NEK9-211ENST00000557673 TGIF2LXQ8IUE1 241 aa13.17□□□□□ -0.3
NEK9-211ENST00000557673 C15orf40Q8WUR7 153 aa13.17□□□□□ -0.3
NEK9-211ENST00000557673 ABHD14BQ96IU4 210 aa13.17□□□□□ -0.3
NEK9-211ENST00000557673 PIPOXQ9P0Z9 390 aa13.17□□□□□ -0.3
NEK9-211ENST00000557673 ZMAT5Q9UDW3 170 aaKnown RBP13.17□□□□□ -0.3
NEK9-211ENST00000557673 WI2-2373I1.2A0A1W2PRP0 233 aa13.16□□□□□ -0.3
NEK9-211ENST00000557673 RAB29O14966 203 aa13.16□□□□□ -0.3
NEK9-211ENST00000557673 KRTAP10-11P60412 298 aa13.16□□□□□ -0.3
NEK9-211ENST00000557673 MRPS10P82664 201 aaKnown RBP13.16□□□□□ -0.3
NEK9-211ENST00000557673 ABCA11PQ4W5N1 156 aa13.16□□□□□ -0.3
NEK9-211ENST00000557673 TCTEX1D4Q5JR98 221 aa13.16□□□□□ -0.3
NEK9-211ENST00000557673 KHDC1LQ5JSQ8 128 aa13.16□□□□□ -0.3
NEK9-211ENST00000557673 PYHIN1Q6K0P9 492 aa13.16□□□□□ -0.3
NEK9-211ENST00000557673 DRAM1Q8N682 238 aa13.16□□□□□ -0.3
NEK9-211ENST00000557673 OR5AP2Q8NGF4 316 aa13.16□□□□□ -0.3
NEK9-211ENST00000557673 OR52I2Q8NH67 350 aa13.16□□□□□ -0.3
NEK9-211ENST00000557673 RBM14Q96PK6 669 aaKnown RBP13.16□□□□□ -0.3
NEK9-211ENST00000557673 B9D2Q9BPU9 175 aa13.16□□□□□ -0.3
NEK9-211ENST00000557673 ZNF251Q9BRH9 671 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms