RNA–Protein interactions for RNA: ENST00000557302.1

SHMT2-228, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-228ENST00000557302 FCER2P06734 321 aa10.83□□□□□ -0.68
SHMT2-228ENST00000557302 SHISA2Q6UWI4 295 aa10.83□□□□□ -0.68
SHMT2-228ENST00000557302 SNX29P2Q8IUI4 249 aa10.83□□□□□ -0.68
SHMT2-228ENST00000557302 Q8N6K4 173 aa10.83□□□□□ -0.68
SHMT2-228ENST00000557302 EXTL2Q9UBQ6 330 aa10.83□□□□□ -0.68
SHMT2-228ENST00000557302 ADAM30Q9UKF2 790 aa10.83□□□□□ -0.68
SHMT2-228ENST00000557302 OR5H14A6NHG9 310 aa10.82□□□□□ -0.68
SHMT2-228ENST00000557302 M0R1X1 148 aa10.82□□□□□ -0.68
SHMT2-228ENST00000557302 AMY1AP04745 511 aa10.82□□□□□ -0.68
SHMT2-228ENST00000557302 AMY2AP04746 511 aa10.82□□□□□ -0.68
SHMT2-228ENST00000557302 CT45A6P0DMU7 189 aa10.82□□□□□ -0.68
SHMT2-228ENST00000557302 CT45A5P0DMU8 189 aa10.82□□□□□ -0.68
SHMT2-228ENST00000557302 CT45A7P0DMV0 189 aa10.82□□□□□ -0.68
SHMT2-228ENST00000557302 NFYAP23511 347 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-228ENST00000557302 VDAC2P45880 294 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-228ENST00000557302 C9orf152Q5JTZ5 239 aa10.82□□□□□ -0.68
SHMT2-228ENST00000557302 FAM131AQ6UXB0 335 aa10.82□□□□□ -0.68
SHMT2-228ENST00000557302 Q6ZS46 218 aa10.82□□□□□ -0.68
SHMT2-228ENST00000557302 C5orf56Q8N8D9 126 aa10.82□□□□□ -0.68
SHMT2-228ENST00000557302 OR8H1Q8NGG4 311 aa10.82□□□□□ -0.68
SHMT2-228ENST00000557302 SNAPC3Q92966 411 aa10.82□□□□□ -0.68
SHMT2-228ENST00000557302 SCPEP1Q9HB40 452 aa10.82□□□□□ -0.68
SHMT2-228ENST00000557302 SERTAD4Q9NUC0 356 aa10.82□□□□□ -0.68
SHMT2-228ENST00000557302 NECAP2Q9NVZ3 263 aa10.82□□□□□ -0.68
SHMT2-228ENST00000557302 RSL24D1Q9UHA3 163 aaKnown RBP10.82□□□□□ -0.68
SHMT2-228ENST00000557302 GAB2Q9UQC2 676 aa10.82□□□□□ -0.68
SHMT2-228ENST00000557302 OR2W1Q9Y3N9 320 aa10.82□□□□□ -0.68
SHMT2-228ENST00000557302 SH2D7A6NKC9 451 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-228ENST00000557302 CTDSP2O14595 271 aa10.81□□□□□ -0.68
SHMT2-228ENST00000557302 PROP1O75360 226 aa10.81□□□□□ -0.68
SHMT2-228ENST00000557302 PEX14O75381 377 aa10.81□□□□□ -0.68
SHMT2-228ENST00000557302 MC5RP33032 325 aa10.81□□□□□ -0.68
SHMT2-228ENST00000557302 LUMP51884 338 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-228ENST00000557302 GLDNQ6ZMI3 551 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-228ENST00000557302 LAX1Q8IWV1 398 aa10.81□□□□□ -0.68
SHMT2-228ENST00000557302 KLHDC1Q8N7A1 406 aa10.81□□□□□ -0.68
SHMT2-228ENST00000557302 DRAXINQ8NBI3 349 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-228ENST00000557302 OR5AP2Q8NGF4 316 aa10.81□□□□□ -0.68
SHMT2-228ENST00000557302 GPX8Q8TED1 209 aa10.81□□□□□ -0.68
SHMT2-228ENST00000557302 RBMXL1Q96E39 390 aaKnown RBP10.81□□□□□ -0.68
SHMT2-228ENST00000557302 C6orf62Q9GZU0 229 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-228ENST00000557302 RBM38Q9H0Z9 239 aaKnown RBP10.81□□□□□ -0.68
SHMT2-228ENST00000557302 MIXL1Q9H2W2 232 aa10.81□□□□□ -0.68
SHMT2-228ENST00000557302 SDHAF2Q9NX18 166 aa10.81□□□□□ -0.68
SHMT2-228ENST00000557302 ANAPC10Q9UM13 185 aa10.81□□□□□ -0.68
SHMT2-228ENST00000557302 H0YJW9 148 aa10.8□□□□□ -0.68
SHMT2-228ENST00000557302 H7C2Y5 167 aa10.8□□□□□ -0.68
SHMT2-228ENST00000557302 J3QRK9 145 aa10.8□□□□□ -0.68
SHMT2-228ENST00000557302 ZNF701M0R085 212 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-228ENST00000557302 SULT1C2O00338 296 aa10.8□□□□□ -0.68
SHMT2-228ENST00000557302 TUSC2O75896 110 aa10.8□□□□□ -0.68
SHMT2-228ENST00000557302 TPPPO94811 219 aa10.8□□□□□ -0.68
SHMT2-228ENST00000557302 OR5H8P0DN80 308 aa10.8□□□□□ -0.68
SHMT2-228ENST00000557302 VSIG10L2P0DP72 767 aa10.8□□□□□ -0.68
SHMT2-228ENST00000557302 TAS2R46P59540 309 aa10.8□□□□□ -0.68
SHMT2-228ENST00000557302 ACTBP60709 375 aa10.8□□□□□ -0.68
SHMT2-228ENST00000557302 CDK10Q15131 360 aa10.8□□□□□ -0.68
SHMT2-228ENST00000557302 MMDQ15546 238 aa10.8□□□□□ -0.68
SHMT2-228ENST00000557302 TMEM95Q3KNT9 176 aa10.8□□□□□ -0.68
SHMT2-228ENST00000557302 OR5AN1Q8NGI8 311 aa10.8□□□□□ -0.68
SHMT2-228ENST00000557302 C15orf40Q8WUR7 153 aa10.8□□□□□ -0.68
SHMT2-228ENST00000557302 C5orf30Q96GV9 206 aa10.8□□□□□ -0.68
SHMT2-228ENST00000557302 SLIRPQ9GZT3 109 aaKnown RBP10.8□□□□□ -0.68
SHMT2-228ENST00000557302 PLSCR3Q9NRY6 295 aa10.8□□□□□ -0.68
SHMT2-228ENST00000557302 WASHC3Q9Y3C0 194 aa10.8□□□□□ -0.68
SHMT2-228ENST00000557302 RBBP9O75884 186 aa10.79□□□□□ -0.68
SHMT2-228ENST00000557302 SLC22A5O76082 557 aa10.79□□□□□ -0.68
SHMT2-228ENST00000557302 APOA2P02652 100 aa10.79□□□□□ -0.68
SHMT2-228ENST00000557302 NAT1P18440 290 aa10.79□□□□□ -0.68
SHMT2-228ENST00000557302 FCGR2CP31995 323 aa10.79□□□□□ -0.68
SHMT2-228ENST00000557302 F2RL1P55085 397 aa10.79□□□□□ -0.68
SHMT2-228ENST00000557302 KRTAP10-3P60369 221 aa10.79□□□□□ -0.68
SHMT2-228ENST00000557302 SRSF4Q08170 494 aaKnown RBP10.79□□□□□ -0.68
SHMT2-228ENST00000557302 ZNF645Q8N7E2 425 aa10.79□□□□□ -0.68
SHMT2-228ENST00000557302 Q8N9W7 124 aa10.79□□□□□ -0.68
SHMT2-228ENST00000557302 ZNF383Q8NA42 475 aa10.79□□□□□ -0.68
SHMT2-228ENST00000557302 OR5H2Q8NGV7 314 aa10.79□□□□□ -0.68
SHMT2-228ENST00000557302 MCFD2Q8NI22 146 aa10.79□□□□□ -0.68
SHMT2-228ENST00000557302 CITED1Q99966 193 aa10.79□□□□□ -0.68
SHMT2-228ENST00000557302 RASL11BQ9BPW5 248 aa10.79□□□□□ -0.68
SHMT2-228ENST00000557302 DCUN1D5Q9BTE7 237 aa10.79□□□□□ -0.68
SHMT2-228ENST00000557302 LIN7CQ9NUP9 197 aaKnown RBP10.79□□□□□ -0.68
SHMT2-228ENST00000557302 EHFQ9NZC4 300 aa10.79□□□□□ -0.68
SHMT2-228ENST00000557302 IGKV1D-13A0A0B4J2D9 117 aa10.78□□□□□ -0.68
SHMT2-228ENST00000557302 NBR2O15453 112 aa10.78□□□□□ -0.68
SHMT2-228ENST00000557302 IGKV1-13P0DP09 117 aa10.78□□□□□ -0.68
SHMT2-228ENST00000557302 AADACP22760 399 aa10.78□□□□□ -0.68
SHMT2-228ENST00000557302 RCVRNP35243 200 aa10.78□□□□□ -0.68
SHMT2-228ENST00000557302 THBS3P49746 956 aa10.78□□□□□ -0.68
SHMT2-228ENST00000557302 LINC00205P59089 165 aa10.78□□□□□ -0.68
SHMT2-228ENST00000557302 TAGLNQ01995 201 aaKnown RBP10.78□□□□□ -0.68
SHMT2-228ENST00000557302 PDPNQ86YL7 162 aa10.78□□□□□ -0.68
SHMT2-228ENST00000557302 FAM71E2Q8N5Q1 922 aa10.78□□□□□ -0.68
SHMT2-228ENST00000557302 DIRAS2Q96HU8 199 aa10.78□□□□□ -0.68
SHMT2-228ENST00000557302 ADTRPQ96IZ2 230 aa10.78□□□□□ -0.68
SHMT2-228ENST00000557302 RITA1Q96K30 269 aa10.78□□□□□ -0.68
SHMT2-228ENST00000557302 WNT10AQ9GZT5 417 aa10.78□□□□□ -0.68
SHMT2-228ENST00000557302 NXF2Q9GZY0 626 aaKnown RBP10.78□□□□□ -0.68
SHMT2-228ENST00000557302 PPYP01298 95 aa10.77□□□□□ -0.69
SHMT2-228ENST00000557302 PMP2P02689 132 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms