RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 C2orf70A6NJV1 201 aa3.43□□□□□ -1.86
SCFD1-223ENST00000557076 PRSS47A8MTI9 375 aa3.43□□□□□ -1.86
SCFD1-223ENST00000557076 PRR32B1ATL7 298 aa3.43□□□□□ -1.86
SCFD1-223ENST00000557076 EPM2AB3EWF7 344 aa3.43□□□□□ -1.86
SCFD1-223ENST00000557076 H0YJX3 145 aa3.43□□□□□ -1.86
SCFD1-223ENST00000557076 M0R2N4 97 aa3.43□□□□□ -1.86
SCFD1-223ENST00000557076 SDCBPO00560 298 aaPredicted RBP3.43□□□□□ -1.86
SCFD1-223ENST00000557076 SYT7O43581 403 aa3.43□□□□□ -1.86
SCFD1-223ENST00000557076 MT-ND2P03891 347 aa3.43□□□□□ -1.86
SCFD1-223ENST00000557076 HMGN1P05114 100 aa3.43□□□□□ -1.86
SCFD1-223ENST00000557076 P0DMU3 169 aa3.43□□□□□ -1.86
SCFD1-223ENST00000557076 FAM231AP0DMU4 169 aa3.43□□□□□ -1.86
SCFD1-223ENST00000557076 FAM231CP0DMU5 169 aa3.43□□□□□ -1.86
SCFD1-223ENST00000557076 DBTP11182 482 aaKnown RBP3.43□□□□□ -1.86
SCFD1-223ENST00000557076 CTRB1P17538 263 aa3.43□□□□□ -1.86
SCFD1-223ENST00000557076 ATF1P18846 271 aa3.43□□□□□ -1.86
SCFD1-223ENST00000557076 MAGOHP61326 146 aaKnown RBP3.43□□□□□ -1.86
SCFD1-223ENST00000557076 MICAQ29983 383 aa3.43□□□□□ -1.86
SCFD1-223ENST00000557076 TMEM30BQ3MIR4 351 aa3.43□□□□□ -1.86
SCFD1-223ENST00000557076 PAN3Q58A45 887 aaKnown RBP3.43□□□□□ -1.86
SCFD1-223ENST00000557076 PVRIGQ6DKI7 326 aa3.43□□□□□ -1.86
SCFD1-223ENST00000557076 CTRB2Q6GPI1 263 aa3.43□□□□□ -1.86
SCFD1-223ENST00000557076 ELP2Q6IA86 826 aa3.43□□□□□ -1.86
SCFD1-223ENST00000557076 GLYATQ6IB77 296 aa3.43□□□□□ -1.86
SCFD1-223ENST00000557076 WDR93Q6P2C0 686 aa3.43□□□□□ -1.86
SCFD1-223ENST00000557076 UTS2BQ765I0 119 aa3.43□□□□□ -1.86
SCFD1-223ENST00000557076 POC5Q8NA72 575 aa3.43□□□□□ -1.86
SCFD1-223ENST00000557076 ZNF439Q8NDP4 499 aa3.43□□□□□ -1.86
SCFD1-223ENST00000557076 OR5T1Q8NG75 326 aa3.43□□□□□ -1.86
SCFD1-223ENST00000557076 OR52B4Q8NGK2 314 aa3.43□□□□□ -1.86
SCFD1-223ENST00000557076 DYNLRB2Q8TF09 96 aa3.43□□□□□ -1.86
SCFD1-223ENST00000557076 SPSB1Q96BD6 273 aa3.43□□□□□ -1.86
SCFD1-223ENST00000557076 RNF125Q96EQ8 232 aa3.43□□□□□ -1.86
SCFD1-223ENST00000557076 RARRES2Q99969 163 aa3.43□□□□□ -1.86
SCFD1-223ENST00000557076 APOL4Q9BPW4 351 aa3.43□□□□□ -1.86
SCFD1-223ENST00000557076 RNF126Q9BV68 326 aa3.43□□□□□ -1.86
SCFD1-223ENST00000557076 DGCR6LQ9BY27 220 aa3.43□□□□□ -1.86
SCFD1-223ENST00000557076 CTDSP1Q9GZU7 261 aa3.43□□□□□ -1.86
SCFD1-223ENST00000557076 RBM38Q9H0Z9 239 aaKnown RBP3.43□□□□□ -1.86
SCFD1-223ENST00000557076 C11orf68Q9H3H3 251 aaKnown RBP3.43□□□□□ -1.86
SCFD1-223ENST00000557076 HRH4Q9H3N8 390 aa3.43□□□□□ -1.86
SCFD1-223ENST00000557076 GORASP2Q9H8Y8 452 aa3.43□□□□□ -1.86
SCFD1-223ENST00000557076 SPAG4Q9NPE6 437 aa3.43□□□□□ -1.86
SCFD1-223ENST00000557076 ZNF355PQ9NSJ1 428 aa3.43□□□□□ -1.86
SCFD1-223ENST00000557076 ARMC1Q9NVT9 282 aa3.43□□□□□ -1.86
SCFD1-223ENST00000557076 MSRB1Q9NZV6 116 aa3.43□□□□□ -1.86
SCFD1-223ENST00000557076 AASSQ9UDR5 926 aa3.43□□□□□ -1.86
SCFD1-223ENST00000557076 DHDHQ9UQ10 334 aa3.43□□□□□ -1.86
SCFD1-223ENST00000557076 A3GALT2U3KPV4 340 aa3.43□□□□□ -1.86
SCFD1-223ENST00000557076 A0A0B4J203 849 aa3.42□□□□□ -1.86
SCFD1-223ENST00000557076 TRAV25A0A0B4J276 109 aa3.42□□□□□ -1.86
SCFD1-223ENST00000557076 NME4O00746 187 aa3.42□□□□□ -1.86
SCFD1-223ENST00000557076 PRYO14603 147 aa3.42□□□□□ -1.86
SCFD1-223ENST00000557076 SLC31A2O15432 143 aa3.42□□□□□ -1.86
SCFD1-223ENST00000557076 GMNNO75496 209 aa3.42□□□□□ -1.86
SCFD1-223ENST00000557076 FADS2O95864 444 aaKnown RBP3.42□□□□□ -1.86
SCFD1-223ENST00000557076 TRBV12-3P01733 135 aa3.42□□□□□ -1.86
SCFD1-223ENST00000557076 MT-ND4P03905 459 aa3.42□□□□□ -1.86
SCFD1-223ENST00000557076 SCTP09683 121 aa3.42□□□□□ -1.86
SCFD1-223ENST00000557076 NCK1P16333 377 aa3.42□□□□□ -1.86
SCFD1-223ENST00000557076 SLC2A5P22732 501 aa3.42□□□□□ -1.86
SCFD1-223ENST00000557076 CBLN1P23435 193 aa3.42□□□□□ -1.86
SCFD1-223ENST00000557076 MAP2K4P45985 399 aa3.42□□□□□ -1.86
SCFD1-223ENST00000557076 PCP4P48539 62 aa3.42□□□□□ -1.86
SCFD1-223ENST00000557076 MAPRE2Q15555 327 aa3.42□□□□□ -1.86
SCFD1-223ENST00000557076 MRGPRG-AS1Q2M3A8 158 aa3.42□□□□□ -1.86
SCFD1-223ENST00000557076 C1orf134Q5TEV5 83 aa3.42□□□□□ -1.86
SCFD1-223ENST00000557076 ZNF57Q68EA5 555 aaPredicted RBP3.42□□□□□ -1.86
SCFD1-223ENST00000557076 C8orf82Q6P1X6 216 aaPredicted RBP3.42□□□□□ -1.86
SCFD1-223ENST00000557076 ZNF322Q6U7Q0 402 aaPredicted RBP3.42□□□□□ -1.86
SCFD1-223ENST00000557076 GPHB5Q86YW7 130 aa3.42□□□□□ -1.86
SCFD1-223ENST00000557076 OR9Q2Q8NGE9 314 aa3.42□□□□□ -1.86
SCFD1-223ENST00000557076 PLPPR1Q8TBJ4 325 aa3.42□□□□□ -1.86
SCFD1-223ENST00000557076 GLMPQ8WWB7 406 aa3.42□□□□□ -1.86
SCFD1-223ENST00000557076 GHSRQ92847 366 aa3.42□□□□□ -1.86
SCFD1-223ENST00000557076 MCUR1Q96AQ8 359 aa3.42□□□□□ -1.86
SCFD1-223ENST00000557076 KCTD14Q9BQ13 255 aaPredicted RBP3.42□□□□□ -1.86
SCFD1-223ENST00000557076 SIKE1Q9BRV8 207 aa3.42□□□□□ -1.86
SCFD1-223ENST00000557076 PARP12Q9H0J9 701 aaKnown RBP3.42□□□□□ -1.86
SCFD1-223ENST00000557076 FBXL15Q9H469 300 aa3.42□□□□□ -1.86
SCFD1-223ENST00000557076 RAB9BQ9NP90 201 aa3.42□□□□□ -1.86
SCFD1-223ENST00000557076 TAS2R1Q9NYW7 299 aa3.42□□□□□ -1.86
SCFD1-223ENST00000557076 RCC2Q9P258 522 aaKnown RBP3.42□□□□□ -1.86
SCFD1-223ENST00000557076 IKZF2Q9UKS7 526 aa3.42□□□□□ -1.86
SCFD1-223ENST00000557076 GAB2Q9UQC2 676 aa3.42□□□□□ -1.86
SCFD1-223ENST00000557076 FAT1Q14517 4588 aa3.41□□□□□ -1.86
SCFD1-223ENST00000557076 IGHV4-4A0A075B6R2 117 aa3.41□□□□□ -1.86
SCFD1-223ENST00000557076 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.41□□□□□ -1.86
SCFD1-223ENST00000557076 TMEM30CPA0ZSE6 113 aa3.41□□□□□ -1.86
SCFD1-223ENST00000557076 NPIPB5A8MRT5 1133 aa3.41□□□□□ -1.86
SCFD1-223ENST00000557076 BMPR1BO00238 502 aa3.41□□□□□ -1.86
SCFD1-223ENST00000557076 TNFRSF11BO00300 401 aa3.41□□□□□ -1.86
SCFD1-223ENST00000557076 HSPB6O14558 160 aa3.41□□□□□ -1.86
SCFD1-223ENST00000557076 SLC22A1O15245 554 aa3.41□□□□□ -1.86
SCFD1-223ENST00000557076 SPINT2O43291 252 aa3.41□□□□□ -1.86
SCFD1-223ENST00000557076 RBBP9O75884 186 aa3.41□□□□□ -1.86
SCFD1-223ENST00000557076 CCNB2O95067 398 aa3.41□□□□□ -1.86
SCFD1-223ENST00000557076 SOX14O95416 240 aa3.41□□□□□ -1.86
SCFD1-223ENST00000557076 FABP3P05413 133 aa3.41□□□□□ -1.86
SCFD1-223ENST00000557076 RBMY1A1P0DJD3 496 aaKnown RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms