RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 IGKV1-13P0DP09 117 aa13.96□□□□□ -0.17
SHMT2-225ENST00000556798 NAT1P18440 290 aa13.96□□□□□ -0.17
SHMT2-225ENST00000556798 AADACP22760 399 aa13.96□□□□□ -0.17
SHMT2-225ENST00000556798 CD1BP29016 333 aa13.96□□□□□ -0.17
SHMT2-225ENST00000556798 FCGR2CP31995 323 aa13.96□□□□□ -0.17
SHMT2-225ENST00000556798 TNFSF8P32971 234 aa13.96□□□□□ -0.17
SHMT2-225ENST00000556798 LINC00205P59089 165 aa13.96□□□□□ -0.17
SHMT2-225ENST00000556798 DGCR2P98153 550 aa13.96□□□□□ -0.17
SHMT2-225ENST00000556798 FOXL1Q12952 345 aa13.96□□□□□ -0.17
SHMT2-225ENST00000556798 IL18Q14116 193 aa13.96□□□□□ -0.17
SHMT2-225ENST00000556798 FAM131AQ6UXB0 335 aa13.96□□□□□ -0.17
SHMT2-225ENST00000556798 C16orf82Q7Z2V1 217 aa13.96□□□□□ -0.17
SHMT2-225ENST00000556798 OR4C13Q8NGP0 309 aa13.96□□□□□ -0.17
SHMT2-225ENST00000556798 OR2T10Q8NGZ9 312 aa13.96□□□□□ -0.17
SHMT2-225ENST00000556798 GHITMQ9H3K2 345 aa13.96□□□□□ -0.17
SHMT2-225ENST00000556798 SDHAF2Q9NX18 166 aa13.96□□□□□ -0.17
SHMT2-225ENST00000556798 EHFQ9NZC4 300 aa13.96□□□□□ -0.17
SHMT2-225ENST00000556798 SIGLEC9Q9Y336 463 aa13.96□□□□□ -0.17
SHMT2-225ENST00000556798 TUSC2O75896 110 aa13.95□□□□□ -0.18
SHMT2-225ENST00000556798 RCVRNP35243 200 aa13.95□□□□□ -0.18
SHMT2-225ENST00000556798 HRH1P35367 487 aa13.95□□□□□ -0.18
SHMT2-225ENST00000556798 RFX2P48378 723 aa13.95□□□□□ -0.18
SHMT2-225ENST00000556798 LUMP51884 338 aaPredicted RBP13.95□□□□□ -0.18
SHMT2-225ENST00000556798 BLCAPP62952 87 aa13.95□□□□□ -0.18
SHMT2-225ENST00000556798 EBI3Q14213 229 aa13.95□□□□□ -0.18
SHMT2-225ENST00000556798 C12orf54Q6X4T0 127 aa13.95□□□□□ -0.18
SHMT2-225ENST00000556798 Q6ZS46 218 aa13.95□□□□□ -0.18
SHMT2-225ENST00000556798 LYSMD2Q8IV50 215 aa13.95□□□□□ -0.18
SHMT2-225ENST00000556798 OR5H2Q8NGV7 314 aa13.95□□□□□ -0.18
SHMT2-225ENST00000556798 LINC01006Q8NI28 216 aa13.95□□□□□ -0.18
SHMT2-225ENST00000556798 AKR1E2Q96JD6 320 aa13.95□□□□□ -0.18
SHMT2-225ENST00000556798 MMP27Q9H306 513 aa13.95□□□□□ -0.18
SHMT2-225ENST00000556798 ZNF702PQ9H963 129 aa13.95□□□□□ -0.18
SHMT2-225ENST00000556798 KLK11Q9UBX7 282 aa13.95□□□□□ -0.18
SHMT2-225ENST00000556798 MOB4Q9Y3A3 225 aa13.95□□□□□ -0.18
SHMT2-225ENST00000556798 H0YJW9 148 aa13.94□□□□□ -0.18
SHMT2-225ENST00000556798 TSPAN9O75954 239 aa13.94□□□□□ -0.18
SHMT2-225ENST00000556798 TPPPO94811 219 aa13.94□□□□□ -0.18
SHMT2-225ENST00000556798 MOSP00540 346 aa13.94□□□□□ -0.18
SHMT2-225ENST00000556798 AMY1AP04745 511 aa13.94□□□□□ -0.18
SHMT2-225ENST00000556798 AMY2AP04746 511 aa13.94□□□□□ -0.18
SHMT2-225ENST00000556798 COMPP49747 757 aaPredicted RBP13.94□□□□□ -0.18
SHMT2-225ENST00000556798 TAS2R46P59540 309 aa13.94□□□□□ -0.18
SHMT2-225ENST00000556798 PYHIN1Q6K0P9 492 aa13.94□□□□□ -0.18
SHMT2-225ENST00000556798 Q8N6K4 173 aa13.94□□□□□ -0.18
SHMT2-225ENST00000556798 ZNF383Q8NA42 475 aa13.94□□□□□ -0.18
SHMT2-225ENST00000556798 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.94□□□□□ -0.18
SHMT2-225ENST00000556798 C15orf40Q8WUR7 153 aa13.94□□□□□ -0.18
SHMT2-225ENST00000556798 RANBP3Q9H6Z4 567 aaPredicted RBP13.94□□□□□ -0.18
SHMT2-225ENST00000556798 BEX1Q9HBH7 125 aa13.94□□□□□ -0.18
SHMT2-225ENST00000556798 A3GALT2U3KPV4 340 aa13.94□□□□□ -0.18
SHMT2-225ENST00000556798 CLPSL1A2RUU4 121 aa13.93□□□□□ -0.18
SHMT2-225ENST00000556798 PPYP01298 95 aa13.93□□□□□ -0.18
SHMT2-225ENST00000556798 S100A5P33763 92 aa13.93□□□□□ -0.18
SHMT2-225ENST00000556798 FXYD4P59646 89 aa13.93□□□□□ -0.18
SHMT2-225ENST00000556798 DYRK1AQ13627 763 aa13.93□□□□□ -0.18
SHMT2-225ENST00000556798 ABCA11PQ4W5N1 156 aa13.93□□□□□ -0.18
SHMT2-225ENST00000556798 OVCH2Q7RTZ1 564 aa13.93□□□□□ -0.18
SHMT2-225ENST00000556798 ZNF645Q8N7E2 425 aa13.93□□□□□ -0.18
SHMT2-225ENST00000556798 FCAMRQ8WWV6 532 aa13.93□□□□□ -0.18
SHMT2-225ENST00000556798 RITA1Q96K30 269 aa13.93□□□□□ -0.18
SHMT2-225ENST00000556798 C16orf95Q9H693 158 aa13.93□□□□□ -0.18
SHMT2-225ENST00000556798 MTFP1Q9UDX5 166 aa13.93□□□□□ -0.18
SHMT2-225ENST00000556798 FABP12A6NFH5 140 aa13.92□□□□□ -0.18
SHMT2-225ENST00000556798 OR5H14A6NHG9 310 aa13.92□□□□□ -0.18
SHMT2-225ENST00000556798 NCBP2LA6PVI3 153 aaKnown RBP13.92□□□□□ -0.18
SHMT2-225ENST00000556798 GABARAPH6UMI1 98 aa13.92□□□□□ -0.18
SHMT2-225ENST00000556798 H7C2Y5 167 aa13.92□□□□□ -0.18
SHMT2-225ENST00000556798 M0QYG6 137 aa13.92□□□□□ -0.18
SHMT2-225ENST00000556798 RBBP9O75884 186 aa13.92□□□□□ -0.18
SHMT2-225ENST00000556798 IGLV2-14P01704 120 aa13.92□□□□□ -0.18
SHMT2-225ENST00000556798 CNTFRP26992 372 aa13.92□□□□□ -0.18
SHMT2-225ENST00000556798 ACTBP60709 375 aa13.92□□□□□ -0.18
SHMT2-225ENST00000556798 TMEM95Q3KNT9 176 aa13.92□□□□□ -0.18
SHMT2-225ENST00000556798 TMEM17Q86X19 198 aa13.92□□□□□ -0.18
SHMT2-225ENST00000556798 C5orf56Q8N8D9 126 aa13.92□□□□□ -0.18
SHMT2-225ENST00000556798 OR5AN1Q8NGI8 311 aa13.92□□□□□ -0.18
SHMT2-225ENST00000556798 OR2T6Q8NHC8 308 aa13.92□□□□□ -0.18
SHMT2-225ENST00000556798 SMIM4Q8WVI0 70 aa13.92□□□□□ -0.18
SHMT2-225ENST00000556798 SECTM1Q8WVN6 248 aa13.92□□□□□ -0.18
SHMT2-225ENST00000556798 PRSS22Q9GZN4 317 aa13.92□□□□□ -0.18
SHMT2-225ENST00000556798 GAB2Q9UQC2 676 aa13.92□□□□□ -0.18
SHMT2-225ENST00000556798 WASHC3Q9Y3C0 194 aa13.92□□□□□ -0.18
SHMT2-225ENST00000556798 RNF114Q9Y508 228 aa13.92□□□□□ -0.18
SHMT2-225ENST00000556798 HAX1O00165 279 aa13.91□□□□□ -0.18
SHMT2-225ENST00000556798 F2RL1P55085 397 aa13.91□□□□□ -0.18
SHMT2-225ENST00000556798 HERV-K104P61576 105 aa13.91□□□□□ -0.18
SHMT2-225ENST00000556798 MRPS10P82664 201 aaKnown RBP13.91□□□□□ -0.18
SHMT2-225ENST00000556798 ARSJQ5FYB0 599 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-225ENST00000556798 C9orf152Q5JTZ5 239 aa13.91□□□□□ -0.18
SHMT2-225ENST00000556798 ZNF660Q6AZW8 331 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-225ENST00000556798 C11orf88Q6PI97 169 aa13.91□□□□□ -0.18
SHMT2-225ENST00000556798 GIMAP1Q8WWP7 306 aa13.91□□□□□ -0.18
SHMT2-225ENST00000556798 SOSTQ9BQB4 213 aa13.91□□□□□ -0.18
SHMT2-225ENST00000556798 ZNF2Q9BSG1 426 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-225ENST00000556798 CCL28Q9NRJ3 127 aa13.91□□□□□ -0.18
SHMT2-225ENST00000556798 PLSCR3Q9NRY6 295 aa13.91□□□□□ -0.18
SHMT2-225ENST00000556798 RABL2AQ9UBK7 228 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-225ENST00000556798 RABL2BQ9UNT1 228 aa13.91□□□□□ -0.18
SHMT2-225ENST00000556798 MMP24Q9Y5R2 645 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms