RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 VSIG8P0DPA2 414 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 KITLGP21583 273 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 SRD5A2P31213 254 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 CX3CR1P49238 355 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 ZNF154Q13106 437 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 SLC36A1Q7Z2H8 476 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 ZNF439Q8NDP4 499 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 OR1S2Q8NGQ3 325 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 MBD3L1Q8WWY6 194 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 LIN37Q96GY3 246 aaPredicted RBP4.36□□□□□ -1.71
TMEM260-210ENST00000556422 SPACA5Q96QH8 159 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 FNDC4Q9H6D8 234 aaPredicted RBP4.36□□□□□ -1.71
TMEM260-210ENST00000556422 GPR84Q9NQS5 396 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 UQCC1Q9NVA1 299 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 PIPOXQ9P0Z9 390 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 KLK13Q9UKR3 277 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 PPIAL4EA0A075B759 164 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 PPIAL4CA0A0B4J2A2 164 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 IGSF23A1L1A6 192 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 IFITM10A6NMD0 228 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 PPIAL4DF5H284 164 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 F5H5K5 113 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 TMPRSS2O15393 492 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 MMP23AO75900 390 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 PPIAL4FP0DN26 164 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 FUT3P21217 361 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 OR10J1P30954 320 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 PRSS3P35030 304 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 ARG2P78540 354 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 MMDQ15546 238 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 RSPO4Q2I0M5 234 aaPredicted RBP4.36□□□□□ -1.71
TMEM260-210ENST00000556422 DMRTC1Q5HYR2 192 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 KHDC1LQ5JSQ8 128 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 ZNF626Q68DY1 528 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 ZNF343Q6P1L6 599 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 ACSM6Q6P461 480 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 TEX38Q6PEX7 206 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 GALNT16Q8N428 558 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 GBGT1Q8N5D6 347 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 OR10G4Q8NGN3 311 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 OR2AJ1Q8NGZ0 328 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 Q8WTZ3 238 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 AQP3Q92482 292 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 RAB39BQ96DA2 213 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 LINC00470Q9BZP3 86 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 PLA2G3Q9NZ20 509 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 POLR1DQ9Y2S0 133 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 FLVCR1Q9Y5Y0 555 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 A0A0A6YYD4 124 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 IGHV2OR16-5A0A0B4J2B6 119 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 CGB1A6NKQ9 187 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 PRAF2O60831 178 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 NEURL1O76050 574 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 MPIG6BO95866 241 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 WNT2P09544 360 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 MPZP25189 248 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 OR3A4PP47883 348 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 GFRA1P56159 465 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 CXADRP78310 365 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 HGFACQ04756 655 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 TMEM183BQ1AE95 376 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 C2orf68Q2NKX9 166 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 ZNF260Q3ZCT1 412 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 ZNF585BQ52M93 769 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 ZDHHC23Q8IYP9 409 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 LFNGQ8NES3 379 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 SNIP1Q8TAD8 396 aaKnown RBP4.35□□□□□ -1.71
TMEM260-210ENST00000556422 HIST1H2BLQ99880 126 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 C20orf144Q9BQM9 153 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 NAA38Q9BRA0 125 aaKnown RBP4.35□□□□□ -1.71
TMEM260-210ENST00000556422 ABHD14AQ9BUJ0 271 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 FKBP11Q9NYL4 201 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 GPR132Q9UNW8 380 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 MRPS28Q9Y2Q9 187 aaKnown RBP4.35□□□□□ -1.71
TMEM260-210ENST00000556422 PPIAL4AQ9Y536 164 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 SMG1Q96Q15 3661 aaKnown RBP4.35□□□□□ -1.71
TMEM260-210ENST00000556422 AKAP13Q12802 2813 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 CNOT1A5YKK6 2376 aaKnown RBP4.35□□□□□ -1.71
TMEM260-210ENST00000556422 TMEM14DPA8MWL7 114 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 C21orf140B9A014 251 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 G3V4G9 280 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 ZNF561-AS1K7EIQ3 104 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 DHHO43323 396 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 TNFSF12O43508 249 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 TOMM40O96008 361 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 OR4A8P0C604 315 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 PPIAL4GP0DN37 164 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 ECI1P42126 302 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 HINT1P49773 126 aaPredicted RBP4.35□□□□□ -1.71
TMEM260-210ENST00000556422 SSBP1Q04837 148 aaKnown RBP4.35□□□□□ -1.71
TMEM260-210ENST00000556422 HMGN3Q15651 99 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 WIPI1Q5MNZ9 446 aaPredicted RBP4.35□□□□□ -1.71
TMEM260-210ENST00000556422 SPINK14Q6IE38 97 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 ZNF627Q7L945 461 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 C20orf196Q8IYI0 205 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 SLC22A24Q8N4F4 322 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 TMEM217Q8N7C4 229 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 FER1L6-AS1Q8NA97 138 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 OR5D14Q8NGL3 314 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 OR8S1Q8NH09 359 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms