RNA–Protein interactions for RNA: ENST00000555929.1

PCNX4-211, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-211ENST00000555929 CCDC32Q9BV29 185 aa6.14□□□□□ -1.43
PCNX4-211ENST00000555929 IFI27L2Q9H2X8 130 aa6.14□□□□□ -1.43
PCNX4-211ENST00000555929 HRASLSQ9HDD0 168 aa6.14□□□□□ -1.43
PCNX4-211ENST00000555929 CCL28Q9NRJ3 127 aa6.14□□□□□ -1.43
PCNX4-211ENST00000555929 PIPOXQ9P0Z9 390 aa6.14□□□□□ -1.43
PCNX4-211ENST00000555929 ZNF107Q9UII5 783 aaPredicted RBP6.14□□□□□ -1.43
PCNX4-211ENST00000555929 TBL2Q9Y4P3 447 aaKnown RBP6.14□□□□□ -1.43
PCNX4-211ENST00000555929 MINOS1-NBL1R4GNA1 71 aa6.14□□□□□ -1.43
PCNX4-211ENST00000555929 WNK2Q9Y3S1 2297 aa6.14□□□□□ -1.43
PCNX4-211ENST00000555929 SVEP1Q4LDE5 3571 aa6.13□□□□□ -1.43
PCNX4-211ENST00000555929 YLPM1P49750 1951 aaKnown RBP6.13□□□□□ -1.43
PCNX4-211ENST00000555929 SAA2-SAA4A0A096LPE2 208 aa6.13□□□□□ -1.43
PCNX4-211ENST00000555929 IGHV3-72A0A0B4J1Y9 119 aa6.13□□□□□ -1.43
PCNX4-211ENST00000555929 OR5H14A6NHG9 310 aa6.13□□□□□ -1.43
PCNX4-211ENST00000555929 M0R1X1 148 aa6.13□□□□□ -1.43
PCNX4-211ENST00000555929 TNFSF12O43508 249 aa6.13□□□□□ -1.43
PCNX4-211ENST00000555929 SAA2P0DJI9 122 aaPredicted RBP6.13□□□□□ -1.43
PCNX4-211ENST00000555929 CD24P25063 80 aa6.13□□□□□ -1.43
PCNX4-211ENST00000555929 ARHGDIBP52566 201 aa6.13□□□□□ -1.43
PCNX4-211ENST00000555929 BAMBIQ13145 260 aa6.13□□□□□ -1.43
PCNX4-211ENST00000555929 KLF9Q13886 244 aaPredicted RBP6.13□□□□□ -1.43
PCNX4-211ENST00000555929 HES1Q14469 280 aa6.13□□□□□ -1.43
PCNX4-211ENST00000555929 HNF4GQ14541 408 aa6.13□□□□□ -1.43
PCNX4-211ENST00000555929 LY6EQ16553 131 aa6.13□□□□□ -1.43
PCNX4-211ENST00000555929 ABCA11PQ4W5N1 156 aa6.13□□□□□ -1.43
PCNX4-211ENST00000555929 VAX1Q5SQQ9 334 aa6.13□□□□□ -1.43
PCNX4-211ENST00000555929 GLDNQ6ZMI3 551 aaPredicted RBP6.13□□□□□ -1.43
PCNX4-211ENST00000555929 IDO2Q6ZQW0 420 aa6.13□□□□□ -1.43
PCNX4-211ENST00000555929 TERB2Q8NHR7 220 aa6.13□□□□□ -1.43
PCNX4-211ENST00000555929 CAPSLQ8WWF8 208 aa6.13□□□□□ -1.43
PCNX4-211ENST00000555929 RBMXL1Q96E39 390 aaKnown RBP6.13□□□□□ -1.43
PCNX4-211ENST00000555929 DUX5Q96PT3 197 aa6.13□□□□□ -1.43
PCNX4-211ENST00000555929 PRRT1Q99946 306 aa6.13□□□□□ -1.43
PCNX4-211ENST00000555929 AGMATQ9BSE5 352 aa6.13□□□□□ -1.43
PCNX4-211ENST00000555929 TOLLIPQ9H0E2 274 aa6.13□□□□□ -1.43
PCNX4-211ENST00000555929 SCP2D1Q9UJQ7 156 aa6.13□□□□□ -1.43
PCNX4-211ENST00000555929 DOCK11Q5JSL3 2073 aa6.13□□□□□ -1.43
PCNX4-211ENST00000555929 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.13□□□□□ -1.433e-21■■■■■ 41.7
PCNX4-211ENST00000555929 SONP18583 2426 aaKnown RBP6.13□□□□□ -1.43
PCNX4-211ENST00000555929 IGHV1-3A0A0C4DH29 117 aa6.12□□□□□ -1.43
PCNX4-211ENST00000555929 BTBD17A6NE02 478 aa6.12□□□□□ -1.43
PCNX4-211ENST00000555929 LY6LH3BQJ8 138 aa6.12□□□□□ -1.43
PCNX4-211ENST00000555929 H3BUX3 64 aa6.12□□□□□ -1.43
PCNX4-211ENST00000555929 H7C2Y5 167 aa6.12□□□□□ -1.43
PCNX4-211ENST00000555929 ITGB1BP1O14713 200 aa6.12□□□□□ -1.43
PCNX4-211ENST00000555929 TIMM23O14925 209 aa6.12□□□□□ -1.43
PCNX4-211ENST00000555929 UPK1BO75841 260 aa6.12□□□□□ -1.43
PCNX4-211ENST00000555929 SLC22A5O76082 557 aa6.12□□□□□ -1.43
PCNX4-211ENST00000555929 ZNF735P0CB33 412 aa6.12□□□□□ -1.43
PCNX4-211ENST00000555929 PI3P19957 117 aa6.12□□□□□ -1.43
PCNX4-211ENST00000555929 BRS3P32247 399 aa6.12□□□□□ -1.43
PCNX4-211ENST00000555929 CCR6P51684 374 aa6.12□□□□□ -1.43
PCNX4-211ENST00000555929 LINC00205P59089 165 aa6.12□□□□□ -1.43
PCNX4-211ENST00000555929 PHLDA2Q53GA4 152 aa6.12□□□□□ -1.43
PCNX4-211ENST00000555929 LY6G6FQ5SQ64 297 aa6.12□□□□□ -1.43
PCNX4-211ENST00000555929 CCDC144NLQ6NUI1 221 aa6.12□□□□□ -1.43
PCNX4-211ENST00000555929 LPCAT3Q6P1A2 487 aa6.12□□□□□ -1.43
PCNX4-211ENST00000555929 SHISA2Q6UWI4 295 aa6.12□□□□□ -1.43
PCNX4-211ENST00000555929 ZNF818PQ6ZRF7 136 aa6.12□□□□□ -1.43
PCNX4-211ENST00000555929 C9orf139Q6ZV77 190 aa6.12□□□□□ -1.43
PCNX4-211ENST00000555929 LDLRAD3Q86YD5 345 aa6.12□□□□□ -1.43
PCNX4-211ENST00000555929 ODF3L1Q8IXM7 274 aa6.12□□□□□ -1.43
PCNX4-211ENST00000555929 ARRDC1Q8N5I2 433 aa6.12□□□□□ -1.43
PCNX4-211ENST00000555929 DRAM1Q8N682 238 aa6.12□□□□□ -1.43
PCNX4-211ENST00000555929 ZNF645Q8N7E2 425 aa6.12□□□□□ -1.43
PCNX4-211ENST00000555929 MARCH1Q8TCQ1 289 aa6.12□□□□□ -1.43
PCNX4-211ENST00000555929 ZNF418Q8TF45 676 aaPredicted RBP6.12□□□□□ -1.43
PCNX4-211ENST00000555929 TCTEX1D2Q8WW35 142 aa6.12□□□□□ -1.43
PCNX4-211ENST00000555929 RTN4IP1Q8WWV3 396 aaPredicted RBP6.12□□□□□ -1.43
PCNX4-211ENST00000555929 MOB3AQ96BX8 217 aa6.12□□□□□ -1.43
PCNX4-211ENST00000555929 AJUBAQ96IF1 538 aa6.12□□□□□ -1.43
PCNX4-211ENST00000555929 ZNF48Q96MX3 618 aaPredicted RBP6.12□□□□□ -1.43
PCNX4-211ENST00000555929 GPHA2Q96T91 129 aa6.12□□□□□ -1.43
PCNX4-211ENST00000555929 SSX3Q99909 188 aa6.12□□□□□ -1.43
PCNX4-211ENST00000555929 MRPL20Q9BYC9 149 aaKnown RBP6.12□□□□□ -1.43
PCNX4-211ENST00000555929 FXYD6Q9H0Q3 95 aa6.12□□□□□ -1.43
PCNX4-211ENST00000555929 GHITMQ9H3K2 345 aa6.12□□□□□ -1.43
PCNX4-211ENST00000555929 SDHAF2Q9NX18 166 aa6.12□□□□□ -1.43
PCNX4-211ENST00000555929 TEP1Q99973 2627 aaKnown RBP6.12□□□□□ -1.43
PCNX4-211ENST00000555929 MTORP42345 2549 aa6.11□□□□□ -1.43
PCNX4-211ENST00000555929 NAP1L6A6NFF2 107 aa6.11□□□□□ -1.43
PCNX4-211ENST00000555929 OOSP1A8MZH6 123 aa6.11□□□□□ -1.43
PCNX4-211ENST00000555929 GPR31O00270 319 aa6.11□□□□□ -1.43
PCNX4-211ENST00000555929 LYRM1O43325 122 aa6.11□□□□□ -1.43
PCNX4-211ENST00000555929 HOXA3O43365 443 aaPredicted RBP6.11□□□□□ -1.43
PCNX4-211ENST00000555929 PEX14O75381 377 aa6.11□□□□□ -1.43
PCNX4-211ENST00000555929 IGHV4-59P01825 116 aa6.11□□□□□ -1.43
PCNX4-211ENST00000555929 RLN1P04808 185 aa6.11□□□□□ -1.43
PCNX4-211ENST00000555929 SNRNP70P08621 437 aaKnown RBP6.11□□□□□ -1.43
PCNX4-211ENST00000555929 FAM157CP0CG43 387 aa6.11□□□□□ -1.43
PCNX4-211ENST00000555929 CT45A6P0DMU7 189 aa6.11□□□□□ -1.43
PCNX4-211ENST00000555929 CT45A5P0DMU8 189 aa6.11□□□□□ -1.43
PCNX4-211ENST00000555929 CT45A7P0DMV0 189 aa6.11□□□□□ -1.43
PCNX4-211ENST00000555929 S100GP29377 79 aa6.11□□□□□ -1.43
PCNX4-211ENST00000555929 GNRHRP30968 328 aa6.11□□□□□ -1.43
PCNX4-211ENST00000555929 IFITM3Q01628 133 aa6.11□□□□□ -1.43
PCNX4-211ENST00000555929 ZNF816Q0VGE8 651 aaPredicted RBP6.11□□□□□ -1.43
PCNX4-211ENST00000555929 LRRC75BQ2VPJ9 315 aa6.11□□□□□ -1.43
PCNX4-211ENST00000555929 OR2B11Q5JQS5 317 aa6.11□□□□□ -1.43
PCNX4-211ENST00000555929 AADACL3Q5VUY0 350 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms