RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 HIST3H2BBQ8N257 126 aa13.59□□□□□ -0.23
TUBB3-209ENST00000555609 OR10P1Q8NGE3 313 aa13.59□□□□□ -0.23
TUBB3-209ENST00000555609 NINJ1Q92982 152 aa13.59□□□□□ -0.23
TUBB3-209ENST00000555609 LURAP1Q96LR2 239 aa13.59□□□□□ -0.23
TUBB3-209ENST00000555609 ACTR3CQ9C0K3 210 aaPredicted RBP13.59□□□□□ -0.23
TUBB3-209ENST00000555609 CXXC4Q9H2H0 198 aa13.59□□□□□ -0.23
TUBB3-209ENST00000555609 SRD5A3Q9H8P0 318 aa13.59□□□□□ -0.23
TUBB3-209ENST00000555609 EP300Q09472 2414 aaPredicted RBP13.59□□□□□ -0.23
TUBB3-209ENST00000555609 FREM1Q5H8C1 2179 aa13.59□□□□□ -0.23
TUBB3-209ENST00000555609 A0A1W2PNU3 283 aaPredicted RBP13.59□□□□□ -0.23
TUBB3-209ENST00000555609 TNFSF15O95150 251 aa13.59□□□□□ -0.23
TUBB3-209ENST00000555609 TRGC1P0CF51 173 aa13.59□□□□□ -0.23
TUBB3-209ENST00000555609 COX5AP20674 150 aa13.59□□□□□ -0.23
TUBB3-209ENST00000555609 OR3A1P47881 315 aa13.59□□□□□ -0.23
TUBB3-209ENST00000555609 GNB2P62879 340 aa13.59□□□□□ -0.23
TUBB3-209ENST00000555609 PAX5Q02548 391 aa13.59□□□□□ -0.23
TUBB3-209ENST00000555609 TMEM249Q2WGJ8 235 aa13.59□□□□□ -0.23
TUBB3-209ENST00000555609 NCR3LG1Q68D85 454 aa13.59□□□□□ -0.23
TUBB3-209ENST00000555609 RPP25LQ8N5L8 163 aaKnown RBP13.59□□□□□ -0.23
TUBB3-209ENST00000555609 EDARADDQ8WWZ3 215 aa13.59□□□□□ -0.23
TUBB3-209ENST00000555609 DEFB127Q9H1M4 99 aa13.59□□□□□ -0.23
TUBB3-209ENST00000555609 SPRR3Q9UBC9 169 aa13.59□□□□□ -0.23
TUBB3-209ENST00000555609 PITPNC1Q9UKF7 332 aa13.59□□□□□ -0.23
TUBB3-209ENST00000555609 ARHGAP21Q5T5U3 1957 aa13.58□□□□□ -0.24
TUBB3-209ENST00000555609 PMS2P5A8MQ11 134 aa13.58□□□□□ -0.24
TUBB3-209ENST00000555609 C12orf77C9JDV5 145 aa13.58□□□□□ -0.24
TUBB3-209ENST00000555609 C17orf112F2Z3M2 114 aa13.58□□□□□ -0.24
TUBB3-209ENST00000555609 PHOX2AO14813 284 aa13.58□□□□□ -0.24
TUBB3-209ENST00000555609 SOX8P57073 446 aa13.58□□□□□ -0.24
TUBB3-209ENST00000555609 SSTP61278 116 aa13.58□□□□□ -0.24
TUBB3-209ENST00000555609 PSG7Q13046 419 aa13.58□□□□□ -0.24
TUBB3-209ENST00000555609 PYY3Q5JQD4 70 aa13.58□□□□□ -0.24
TUBB3-209ENST00000555609 SPNS3Q6ZMD2 512 aa13.58□□□□□ -0.24
TUBB3-209ENST00000555609 C1orf174Q8IYL3 243 aa13.58□□□□□ -0.24
TUBB3-209ENST00000555609 OR10A7Q8NGE5 316 aa13.58□□□□□ -0.24
TUBB3-209ENST00000555609 ANAPC16Q96DE5 110 aa13.58□□□□□ -0.24
TUBB3-209ENST00000555609 HSD17B10Q99714 261 aaKnown RBP13.58□□□□□ -0.24
TUBB3-209ENST00000555609 SMIM7Q9BQ49 75 aa13.58□□□□□ -0.24
TUBB3-209ENST00000555609 OR2D2Q9H210 308 aa13.58□□□□□ -0.24
TUBB3-209ENST00000555609 ARRDC1-AS1Q9H2J1 176 aa13.58□□□□□ -0.24
TUBB3-209ENST00000555609 WASF3Q9UPY6 502 aa13.58□□□□□ -0.24
TUBB3-209ENST00000555609 RIF1Q5UIP0 2472 aaKnown RBP13.57□□□□□ -0.24
TUBB3-209ENST00000555609 SMCO3A2RU48 225 aa13.57□□□□□ -0.24
TUBB3-209ENST00000555609 FAM90A9PA6NNJ1 464 aa13.57□□□□□ -0.24
TUBB3-209ENST00000555609 HBZP02008 142 aa13.57□□□□□ -0.24
TUBB3-209ENST00000555609 IGHV1-2P23083 117 aa13.57□□□□□ -0.24
TUBB3-209ENST00000555609 IDH3GP51553 393 aaPredicted RBP13.57□□□□□ -0.24
TUBB3-209ENST00000555609 NUBP1P53384 320 aa13.57□□□□□ -0.24
TUBB3-209ENST00000555609 ELLP55199 621 aaPredicted RBP13.57□□□□□ -0.24
TUBB3-209ENST00000555609 MZT1Q08AG7 82 aa13.57□□□□□ -0.24
TUBB3-209ENST00000555609 OR8G2PQ6IF36 304 aa13.57□□□□□ -0.24
TUBB3-209ENST00000555609 ZNF600Q6ZNG1 722 aa13.57□□□□□ -0.24
TUBB3-209ENST00000555609 ZNF709Q8N972 641 aa13.57□□□□□ -0.24
TUBB3-209ENST00000555609 C1orf162Q8NEQ5 155 aaPredicted RBP13.57□□□□□ -0.24
TUBB3-209ENST00000555609 OR1L1Q8NH94 360 aa13.57□□□□□ -0.24
TUBB3-209ENST00000555609 ABHD5Q8WTS1 349 aa13.57□□□□□ -0.24
TUBB3-209ENST00000555609 FRZBQ92765 325 aa13.57□□□□□ -0.24
TUBB3-209ENST00000555609 TRAV20A0A0B4J274 112 aa13.57□□□□□ -0.24
TUBB3-209ENST00000555609 ODAMA1E959 279 aa13.57□□□□□ -0.24
TUBB3-209ENST00000555609 OR5H1A6NKK0 313 aa13.57□□□□□ -0.24
TUBB3-209ENST00000555609 GRPP07492 148 aa13.57□□□□□ -0.24
TUBB3-209ENST00000555609 PFN1P07737 140 aaKnown RBP13.57□□□□□ -0.24
TUBB3-209ENST00000555609 MDKP21741 143 aaPredicted RBP13.57□□□□□ -0.24
TUBB3-209ENST00000555609 BSXQ3C1V8 233 aa13.57□□□□□ -0.24
TUBB3-209ENST00000555609 OR10G9Q8NGN4 311 aa13.57□□□□□ -0.24
TUBB3-209ENST00000555609 OR10G7Q8NGN6 311 aa13.57□□□□□ -0.24
TUBB3-209ENST00000555609 DTD1Q8TEA8 209 aa13.57□□□□□ -0.24
TUBB3-209ENST00000555609 PFDN5Q99471 154 aa13.57□□□□□ -0.24
TUBB3-209ENST00000555609 CNTRLQ7Z7A1 2325 aa13.56□□□□□ -0.24
TUBB3-209ENST00000555609 PSPNO60542 156 aa13.56□□□□□ -0.24
TUBB3-209ENST00000555609 VENTXO95231 258 aa13.56□□□□□ -0.24
TUBB3-209ENST00000555609 ADH4P08319 380 aa13.56□□□□□ -0.24
TUBB3-209ENST00000555609 CELA3BP08861 270 aa13.56□□□□□ -0.24
TUBB3-209ENST00000555609 CD59P13987 128 aa13.56□□□□□ -0.24
TUBB3-209ENST00000555609 FGF7P21781 194 aa13.56□□□□□ -0.24
TUBB3-209ENST00000555609 HTD2P86397 168 aa13.56□□□□□ -0.24
TUBB3-209ENST00000555609 OR2B11Q5JQS5 317 aa13.56□□□□□ -0.24
TUBB3-209ENST00000555609 FAM209BQ5JX69 171 aa13.56□□□□□ -0.24
TUBB3-209ENST00000555609 ACSM6Q6P461 480 aa13.56□□□□□ -0.24
TUBB3-209ENST00000555609 ACP7Q6ZNF0 438 aa13.56□□□□□ -0.24
TUBB3-209ENST00000555609 Q6ZT83 130 aa13.56□□□□□ -0.24
TUBB3-209ENST00000555609 H2BFWTQ7Z2G1 175 aa13.56□□□□□ -0.24
TUBB3-209ENST00000555609 OR10D4PQ8NGN7 298 aa13.56□□□□□ -0.24
TUBB3-209ENST00000555609 KLF14Q8TD94 323 aaPredicted RBP13.56□□□□□ -0.24
TUBB3-209ENST00000555609 OR5B12Q96R08 314 aa13.56□□□□□ -0.24
TUBB3-209ENST00000555609 DIRC2Q96SL1 478 aa13.56□□□□□ -0.24
TUBB3-209ENST00000555609 OBP2BQ9NPH6 170 aa13.56□□□□□ -0.24
TUBB3-209ENST00000555609 CLCF1Q9UBD9 225 aa13.56□□□□□ -0.24
TUBB3-209ENST00000555609 IL17BQ9UHF5 180 aa13.56□□□□□ -0.24
TUBB3-209ENST00000555609 TINAGQ9UJW2 476 aa13.56□□□□□ -0.24
TUBB3-209ENST00000555609 KRASP01116 189 aa13.55□□□□□ -0.24
TUBB3-209ENST00000555609 HIST1H1BP16401 226 aaKnown RBP13.55□□□□□ -0.24
TUBB3-209ENST00000555609 KITLGP21583 273 aa13.55□□□□□ -0.24
TUBB3-209ENST00000555609 G6PCP35575 357 aa13.55□□□□□ -0.24
TUBB3-209ENST00000555609 RPL30P62888 115 aaKnown RBP13.55□□□□□ -0.24
TUBB3-209ENST00000555609 RPP30P78346 268 aaKnown RBP13.55□□□□□ -0.24
TUBB3-209ENST00000555609 NHLH1Q02575 133 aa13.55□□□□□ -0.24
TUBB3-209ENST00000555609 ACOT6Q3I5F7 207 aaPredicted RBP13.55□□□□□ -0.24
TUBB3-209ENST00000555609 AARDQ4LEZ3 155 aa13.55□□□□□ -0.24
TUBB3-209ENST00000555609 C11orf53Q8IXP5 236 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms