RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 MRGPRGQ86SM5 289 aa20.21■□□□□ 0.83
TMEM260-207ENST00000555497 HAPLN4Q86UW8 402 aa20.21■□□□□ 0.83
TMEM260-207ENST00000555497 STX12Q86Y82 276 aa20.21■□□□□ 0.83
TMEM260-207ENST00000555497 TCTEX1D2Q8WW35 142 aa20.21■□□□□ 0.83
TMEM260-207ENST00000555497 COL25A1Q9BXS0 654 aaPredicted RBP20.21■□□□□ 0.83
TMEM260-207ENST00000555497 SEBOXQ9HB31 216 aaPredicted RBP20.21■□□□□ 0.83
TMEM260-207ENST00000555497 MGST3O14880 152 aa20.2■□□□□ 0.82
TMEM260-207ENST00000555497 PRR30Q53SZ7 412 aaPredicted RBP20.2■□□□□ 0.82
TMEM260-207ENST00000555497 CLDN1O95832 211 aa20.19■□□□□ 0.82
TMEM260-207ENST00000555497 IGHV1-46P01743 117 aa20.19■□□□□ 0.82
TMEM260-207ENST00000555497 METTL15P1P0C7V9 234 aa20.19■□□□□ 0.82
TMEM260-207ENST00000555497 GUK1Q16774 197 aa20.19■□□□□ 0.82
TMEM260-207ENST00000555497 Q3ZCU0 254 aa20.19■□□□□ 0.82
TMEM260-207ENST00000555497 SAV1Q9H4B6 383 aaPredicted RBP20.19■□□□□ 0.82
TMEM260-207ENST00000555497 NDRG3Q9UGV2 375 aa20.19■□□□□ 0.82
TMEM260-207ENST00000555497 PROP1O75360 226 aa20.19■□□□□ 0.82
TMEM260-207ENST00000555497 GATA4P43694 442 aa20.19■□□□□ 0.82
TMEM260-207ENST00000555497 MSMO1Q15800 293 aa20.19■□□□□ 0.82
TMEM260-207ENST00000555497 TRAT1Q6PIZ9 186 aa20.19■□□□□ 0.82
TMEM260-207ENST00000555497 GFRALQ6UXV0 394 aa20.19■□□□□ 0.82
TMEM260-207ENST00000555497 COMMD1Q8N668 190 aa20.19■□□□□ 0.82
TMEM260-207ENST00000555497 GCM1Q9NP62 436 aa20.19■□□□□ 0.82
TMEM260-207ENST00000555497 ADH4P08319 380 aa20.18■□□□□ 0.82
TMEM260-207ENST00000555497 RPS23P62266 143 aaKnown RBP20.18■□□□□ 0.82
TMEM260-207ENST00000555497 CCL20P78556 96 aa20.18■□□□□ 0.82
TMEM260-207ENST00000555497 CATR1Q13166 79 aa20.18■□□□□ 0.82
TMEM260-207ENST00000555497 CR1LQ2VPA4 569 aa20.18■□□□□ 0.82
TMEM260-207ENST00000555497 DUX4L9Q6RFH8 374 aaPredicted RBP20.18■□□□□ 0.82
TMEM260-207ENST00000555497 COA4Q9NYJ1 87 aa20.18■□□□□ 0.82
TMEM260-207ENST00000555497 PCP4L1A6NKN8 68 aa20.18■□□□□ 0.82
TMEM260-207ENST00000555497 GZMHP20718 246 aa20.18■□□□□ 0.82
TMEM260-207ENST00000555497 UTF1Q5T230 341 aa20.18■□□□□ 0.82
TMEM260-207ENST00000555497 TGIF2LYQ8IUE0 185 aa20.18■□□□□ 0.82
TMEM260-207ENST00000555497 CBLN2Q8IUK8 224 aa20.18■□□□□ 0.82
TMEM260-207ENST00000555497 H7C2Y5 167 aa20.17■□□□□ 0.82
TMEM260-207ENST00000555497 PPT1P50897 306 aa20.17■□□□□ 0.82
TMEM260-207ENST00000555497 TNFAIP6P98066 277 aaPredicted RBP20.17■□□□□ 0.82
TMEM260-207ENST00000555497 SNRNP40Q96DI7 357 aaKnown RBP20.17■□□□□ 0.82
TMEM260-207ENST00000555497 RBKSQ9H477 322 aa20.17■□□□□ 0.82
TMEM260-207ENST00000555497 DOCK11Q5JSL3 2073 aa20.17■□□□□ 0.82
TMEM260-207ENST00000555497 DSCAML1Q8TD84 2053 aa20.17■□□□□ 0.82
TMEM260-207ENST00000555497 UMAD1C9J7I0 102 aa20.17■□□□□ 0.82
TMEM260-207ENST00000555497 C16orf97H3BN30 126 aa20.17■□□□□ 0.82
TMEM260-207ENST00000555497 K7ENP7 123 aa20.17■□□□□ 0.82
TMEM260-207ENST00000555497 GPR37O15354 613 aa20.17■□□□□ 0.82
TMEM260-207ENST00000555497 SNAPINO95295 136 aa20.17■□□□□ 0.82
TMEM260-207ENST00000555497 IGHV3-7P01780 117 aa20.17■□□□□ 0.82
TMEM260-207ENST00000555497 EDDM3BP56851 147 aa20.17■□□□□ 0.82
TMEM260-207ENST00000555497 UBE2KP61086 200 aa20.17■□□□□ 0.82
TMEM260-207ENST00000555497 MORN2Q502X0 79 aa20.17■□□□□ 0.82
TMEM260-207ENST00000555497 SPSB3Q6PJ21 355 aa20.17■□□□□ 0.82
TMEM260-207ENST00000555497 FAM222BQ8WU58 562 aa20.17■□□□□ 0.82
TMEM260-207ENST00000555497 GNPNAT1Q96EK6 184 aaPredicted RBP20.17■□□□□ 0.82
TMEM260-207ENST00000555497 RAI1Q7Z5J4 1906 aaPredicted RBP20.16■□□□□ 0.82
TMEM260-207ENST00000555497 CYB5R3P00387 301 aaPredicted RBP20.16■□□□□ 0.82
TMEM260-207ENST00000555497 LOXL3P58215 753 aa20.16■□□□□ 0.82
TMEM260-207ENST00000555497 TNFRSF9Q07011 255 aa20.16■□□□□ 0.82
TMEM260-207ENST00000555497 WFDC8Q8IUA0 241 aa20.16■□□□□ 0.82
TMEM260-207ENST00000555497 EIF5A2Q9GZV4 153 aaKnown RBP20.16■□□□□ 0.82
TMEM260-207ENST00000555497 ZNF835Q9Y2P0 537 aa20.16■□□□□ 0.82
TMEM260-207ENST00000555497 DPRXA6NFQ7 191 aa20.15■□□□□ 0.82
TMEM260-207ENST00000555497 DFFBO76075 338 aa20.15■□□□□ 0.82
TMEM260-207ENST00000555497 THBDP07204 575 aa20.15■□□□□ 0.82
TMEM260-207ENST00000555497 NFYBP25208 207 aa20.15■□□□□ 0.82
TMEM260-207ENST00000555497 TAS2R30P59541 319 aa20.15■□□□□ 0.82
TMEM260-207ENST00000555497 SPANXN5Q5MJ07 72 aa20.15■□□□□ 0.82
TMEM260-207ENST00000555497 NCR3LG1Q68D85 454 aa20.15■□□□□ 0.82
TMEM260-207ENST00000555497 ZNF66Q6ZN08 573 aa20.15■□□□□ 0.82
TMEM260-207ENST00000555497 THNSL2Q86YJ6 484 aa20.15■□□□□ 0.82
TMEM260-207ENST00000555497 ZNF525Q8N782 197 aa20.15■□□□□ 0.82
TMEM260-207ENST00000555497 PPP1R35Q8TAP8 253 aa20.15■□□□□ 0.82
TMEM260-207ENST00000555497 DCAF16Q9NXF7 216 aa20.15■□□□□ 0.82
TMEM260-207ENST00000555497 RNF7Q9UBF6 113 aa20.15■□□□□ 0.82
TMEM260-207ENST00000555497 GNG12Q9UBI6 72 aa20.15■□□□□ 0.82
TMEM260-207ENST00000555497 HSPB7Q9UBY9 170 aa20.15■□□□□ 0.82
TMEM260-207ENST00000555497 IL19Q9UHD0 177 aa20.15■□□□□ 0.82
TMEM260-207ENST00000555497 FBXO7Q9Y3I1 522 aa20.15■□□□□ 0.82
TMEM260-207ENST00000555497 ZNF134P52741 427 aa20.15■□□□□ 0.82
TMEM260-207ENST00000555497 SELENOVP59797 346 aa20.15■□□□□ 0.82
TMEM260-207ENST00000555497 HFEQ30201 348 aa20.15■□□□□ 0.82
TMEM260-207ENST00000555497 NUP37Q8NFH4 326 aa20.15■□□□□ 0.82
TMEM260-207ENST00000555497 DYSFO75923 2080 aa20.15■□□□□ 0.82
TMEM260-207ENST00000555497 PTPRQQ9UMZ3 2332 aa20.14■□□□□ 0.82
TMEM260-207ENST00000555497 FAM90A26D6RGX4 464 aa20.14■□□□□ 0.81
TMEM260-207ENST00000555497 CGB3P0DN86 165 aa20.14■□□□□ 0.81
TMEM260-207ENST00000555497 CGB7P0DN87 165 aa20.14■□□□□ 0.81
TMEM260-207ENST00000555497 HOXA1P49639 335 aaPredicted RBP20.14■□□□□ 0.81
TMEM260-207ENST00000555497 PEA15Q15121 130 aa20.14■□□□□ 0.81
TMEM260-207ENST00000555497 SP5Q6BEB4 398 aaPredicted RBP20.14■□□□□ 0.81
TMEM260-207ENST00000555497 DHRS7BQ6IAN0 325 aaPredicted RBP20.14■□□□□ 0.81
TMEM260-207ENST00000555497 ELOVL5Q9NYP7 299 aa20.14■□□□□ 0.81
TMEM260-207ENST00000555497 ROS1P08922 2347 aa20.14■□□□□ 0.81
TMEM260-207ENST00000555497 LRRC30A6NM36 301 aa20.14■□□□□ 0.81
TMEM260-207ENST00000555497 DEFB108BQ8NET1 73 aa20.14■□□□□ 0.81
TMEM260-207ENST00000555497 HSD17B10Q99714 261 aaKnown RBP20.14■□□□□ 0.81
TMEM260-207ENST00000555497 JKAMPQ9P055 326 aa20.14■□□□□ 0.81
TMEM260-207ENST00000555497 JPT1Q9UK76 154 aa20.14■□□□□ 0.81
TMEM260-207ENST00000555497 F2RL2O00254 374 aa20.13■□□□□ 0.81
TMEM260-207ENST00000555497 CLDN14O95500 239 aa20.13■□□□□ 0.81
TMEM260-207ENST00000555497 TMEM108Q6UXF1 575 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms