RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 BET1O15155 118 aa8.14□□□□□ -1.11
PSEN1-213ENST00000555386 SIGLEC5O15389 551 aa8.14□□□□□ -1.11
PSEN1-213ENST00000555386 GLAP06280 429 aa8.14□□□□□ -1.11
PSEN1-213ENST00000555386 ACAA1P09110 424 aaPredicted RBP8.14□□□□□ -1.11
PSEN1-213ENST00000555386 ZNF44P15621 663 aa8.14□□□□□ -1.11
PSEN1-213ENST00000555386 PIGPP57054 158 aa8.14□□□□□ -1.11
PSEN1-213ENST00000555386 SRPXP78539 464 aa8.14□□□□□ -1.11
PSEN1-213ENST00000555386 RAB32Q13637 225 aa8.14□□□□□ -1.11
PSEN1-213ENST00000555386 EDDM3AQ14507 147 aa8.14□□□□□ -1.11
PSEN1-213ENST00000555386 SMCO1Q147U7 214 aa8.14□□□□□ -1.11
PSEN1-213ENST00000555386 EIF5AL1Q6IS14 154 aaKnown RBP8.14□□□□□ -1.11
PSEN1-213ENST00000555386 RNF141Q8WVD5 230 aa8.14□□□□□ -1.11
PSEN1-213ENST00000555386 RRNAD1Q96FB5 475 aaKnown RBP8.14□□□□□ -1.11
PSEN1-213ENST00000555386 C1orf159Q96HA4 380 aa8.14□□□□□ -1.11
PSEN1-213ENST00000555386 CYYR1Q96J86 154 aa8.14□□□□□ -1.11
PSEN1-213ENST00000555386 RSRP1Q9BUV0 290 aa8.14□□□□□ -1.11
PSEN1-213ENST00000555386 RIMS4Q9H426 269 aaPredicted RBP8.14□□□□□ -1.11
PSEN1-213ENST00000555386 C7orf69Q9H7B7 122 aa8.14□□□□□ -1.11
PSEN1-213ENST00000555386 SPACA1Q9HBV2 294 aa8.14□□□□□ -1.11
PSEN1-213ENST00000555386 CYTL1Q9NRR1 136 aa8.14□□□□□ -1.11
PSEN1-213ENST00000555386 RCC2Q9P258 522 aaKnown RBP8.14□□□□□ -1.11
PSEN1-213ENST00000555386 SH2D1BO14796 132 aa8.13□□□□□ -1.11
PSEN1-213ENST00000555386 DEGS1O15121 323 aa8.13□□□□□ -1.11
PSEN1-213ENST00000555386 FSTL3O95633 263 aa8.13□□□□□ -1.11
PSEN1-213ENST00000555386 HOXB5P09067 269 aa8.13□□□□□ -1.11
PSEN1-213ENST00000555386 CTXN2P0C2S0 81 aa8.13□□□□□ -1.11
PSEN1-213ENST00000555386 DVL1P1P54792 670 aaPredicted RBP8.13□□□□□ -1.11
PSEN1-213ENST00000555386 EDDM3BP56851 147 aa8.13□□□□□ -1.11
PSEN1-213ENST00000555386 TMEM187Q14656 261 aa8.13□□□□□ -1.11
PSEN1-213ENST00000555386 IAH1Q2TAA2 248 aaPredicted RBP8.13□□□□□ -1.11
PSEN1-213ENST00000555386 FAM120AOSQ5T036 256 aa8.13□□□□□ -1.11
PSEN1-213ENST00000555386 BTNL3Q6UXE8 466 aa8.13□□□□□ -1.11
PSEN1-213ENST00000555386 RTN4IP1Q8WWV3 396 aaPredicted RBP8.13□□□□□ -1.11
PSEN1-213ENST00000555386 SLC5A7Q9GZV3 580 aa8.13□□□□□ -1.11
PSEN1-213ENST00000555386 PLEKHA2Q9HB19 425 aa8.13□□□□□ -1.11
PSEN1-213ENST00000555386 TAS2R3Q9NYW6 316 aa8.13□□□□□ -1.11
PSEN1-213ENST00000555386 OR5AC2Q9NZP5 309 aa8.13□□□□□ -1.11
PSEN1-213ENST00000555386 ZNF581Q9P0T4 197 aa8.13□□□□□ -1.11
PSEN1-213ENST00000555386 ONECUT1Q9UBC0 465 aa8.13□□□□□ -1.11
PSEN1-213ENST00000555386 KAAG1Q9UBP8 84 aa8.13□□□□□ -1.11
PSEN1-213ENST00000555386 JMJD1CQ15652 2540 aa8.13□□□□□ -1.11
PSEN1-213ENST00000555386 IGHV3OR16-10A0A075B7F0 116 aa8.13□□□□□ -1.11
PSEN1-213ENST00000555386 PIGBOS1A0A0B4J2F0 54 aa8.13□□□□□ -1.11
PSEN1-213ENST00000555386 IGHV2-70DA0A0C4DH43 119 aa8.13□□□□□ -1.11
PSEN1-213ENST00000555386 KIR2DS1A0A191URI9 304 aa8.13□□□□□ -1.11
PSEN1-213ENST00000555386 MPTX1A8MV57 137 aa8.13□□□□□ -1.11
PSEN1-213ENST00000555386 DEDDO75618 318 aa8.13□□□□□ -1.11
PSEN1-213ENST00000555386 OR7C1O76099 320 aaPredicted RBP8.13□□□□□ -1.11
PSEN1-213ENST00000555386 OR2H2O95918 312 aa8.13□□□□□ -1.11
PSEN1-213ENST00000555386 NAPSAO96009 420 aa8.13□□□□□ -1.11
PSEN1-213ENST00000555386 GAPDHP04406 335 aaKnown RBP8.13□□□□□ -1.11
PSEN1-213ENST00000555386 FCGR2CP31995 323 aa8.13□□□□□ -1.11
PSEN1-213ENST00000555386 SRP14P37108 136 aaKnown RBP8.13□□□□□ -1.11
PSEN1-213ENST00000555386 KIR2DS4P43632 304 aa8.13□□□□□ -1.11
PSEN1-213ENST00000555386 HERV-K104P61576 105 aa8.13□□□□□ -1.11
PSEN1-213ENST00000555386 RND3P61587 244 aa8.13□□□□□ -1.11
PSEN1-213ENST00000555386 PRB3Q04118 309 aaPredicted RBP8.13□□□□□ -1.11
PSEN1-213ENST00000555386 IL13RA2Q14627 380 aa8.13□□□□□ -1.11
PSEN1-213ENST00000555386 KIR2DS1Q14954 304 aa8.13□□□□□ -1.11
PSEN1-213ENST00000555386 FAM74A1Q5RGS3 127 aa8.13□□□□□ -1.11
PSEN1-213ENST00000555386 GGNBP1Q5YKI7 109 aa8.13□□□□□ -1.11
PSEN1-213ENST00000555386 LGI3Q8N145 548 aa8.13□□□□□ -1.11
PSEN1-213ENST00000555386 ZNF561Q8N587 486 aa8.13□□□□□ -1.11
PSEN1-213ENST00000555386 TPRX1Q8N7U7 411 aa8.13□□□□□ -1.11
PSEN1-213ENST00000555386 MARC2Q969Z3 335 aa8.13□□□□□ -1.11
PSEN1-213ENST00000555386 SAT2Q96F10 170 aaPredicted RBP8.13□□□□□ -1.11
PSEN1-213ENST00000555386 SDSLQ96GA7 329 aa8.13□□□□□ -1.11
PSEN1-213ENST00000555386 PCGF1Q9BSM1 259 aa8.13□□□□□ -1.11
PSEN1-213ENST00000555386 IFT22Q9H7X7 185 aa8.13□□□□□ -1.11
PSEN1-213ENST00000555386 SLC2A9Q9NRM0 540 aa8.13□□□□□ -1.11
PSEN1-213ENST00000555386 GSKIPQ9P0R6 139 aa8.13□□□□□ -1.11
PSEN1-213ENST00000555386 TMA7Q9Y2S6 64 aaKnown RBP8.13□□□□□ -1.11
PSEN1-213ENST00000555386 CUBNO60494 3623 aa8.12□□□□□ -1.11
PSEN1-213ENST00000555386 MXRA5Q9NR99 2828 aa8.12□□□□□ -1.11
PSEN1-213ENST00000555386 TRBV6-6A0A0A6YYG2 114 aa8.12□□□□□ -1.11
PSEN1-213ENST00000555386 PPIAL4CA0A0B4J2A2 164 aa8.12□□□□□ -1.11
PSEN1-213ENST00000555386 ENSAO43768 121 aaKnown RBP8.12□□□□□ -1.11
PSEN1-213ENST00000555386 DIRAS3O95661 229 aa8.12□□□□□ -1.11
PSEN1-213ENST00000555386 AVPP01185 164 aa8.12□□□□□ -1.11
PSEN1-213ENST00000555386 TK1P04183 234 aa8.12□□□□□ -1.11
PSEN1-213ENST00000555386 PPIAL4GP0DN37 164 aa8.12□□□□□ -1.11
PSEN1-213ENST00000555386 HKR1P10072 659 aa8.12□□□□□ -1.11
PSEN1-213ENST00000555386 DLX1P56177 255 aa8.12□□□□□ -1.11
PSEN1-213ENST00000555386 S100A10P60903 97 aa8.12□□□□□ -1.11
PSEN1-213ENST00000555386 ARF6P62330 175 aa8.12□□□□□ -1.11
PSEN1-213ENST00000555386 SPIN3Q5JUX0 258 aa8.12□□□□□ -1.11
PSEN1-213ENST00000555386 TOMM40LQ969M1 308 aa8.12□□□□□ -1.11
PSEN1-213ENST00000555386 ARL11Q969Q4 196 aa8.12□□□□□ -1.11
PSEN1-213ENST00000555386 Q9N2K0 584 aa8.12□□□□□ -1.11
PSEN1-213ENST00000555386 C19orf12Q9NSK7 152 aa8.12□□□□□ -1.11
PSEN1-213ENST00000555386 PRR13Q9NZ81 148 aa8.12□□□□□ -1.11
PSEN1-213ENST00000555386 RPUSD1Q9UJJ7 312 aaKnown RBP8.12□□□□□ -1.11
PSEN1-213ENST00000555386 TMED3Q9Y3Q3 217 aa8.12□□□□□ -1.11
PSEN1-213ENST00000555386 INSIG2Q9Y5U4 225 aa8.12□□□□□ -1.11
PSEN1-213ENST00000555386 DUXBA0A1W2PPF3 345 aa8.11□□□□□ -1.11
PSEN1-213ENST00000555386 MSGN1A6NI15 193 aa8.11□□□□□ -1.11
PSEN1-213ENST00000555386 E5RGE8 158 aa8.11□□□□□ -1.11
PSEN1-213ENST00000555386 K7EPK0 472 aa8.11□□□□□ -1.11
PSEN1-213ENST00000555386 K7N7A8 449 aa8.11□□□□□ -1.11
PSEN1-213ENST00000555386 PSPNO60542 156 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms