RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 FAHD2AQ96GK7 314 aa8.76□□□□□ -1.01
TDP1-211ENST00000555178 OR51J1Q9H342 316 aa8.76□□□□□ -1.01
TDP1-211ENST00000555178 RAB9BQ9NP90 201 aa8.76□□□□□ -1.01
TDP1-211ENST00000555178 TEX13DA0A0J9YY54 714 aaPredicted RBP8.75□□□□□ -1.01
TDP1-211ENST00000555178 LINC00473A8K010 186 aa8.75□□□□□ -1.01
TDP1-211ENST00000555178 J3QR06 171 aa8.75□□□□□ -1.01
TDP1-211ENST00000555178 MPPED1O15442 326 aa8.75□□□□□ -1.01
TDP1-211ENST00000555178 RGS11O94810 467 aa8.75□□□□□ -1.01
TDP1-211ENST00000555178 IL5P05113 134 aa8.75□□□□□ -1.01
TDP1-211ENST00000555178 HOXB4P17483 251 aaPredicted RBP8.75□□□□□ -1.01
TDP1-211ENST00000555178 GPR12P47775 334 aa8.75□□□□□ -1.01
TDP1-211ENST00000555178 REG1BP48304 166 aa8.75□□□□□ -1.01
TDP1-211ENST00000555178 EIF4EBP1Q13541 118 aaPredicted RBP8.75□□□□□ -1.01
TDP1-211ENST00000555178 KLF17Q5JT82 389 aaPredicted RBP8.75□□□□□ -1.01
TDP1-211ENST00000555178 DCAF12L2Q5VW00 463 aa8.75□□□□□ -1.01
TDP1-211ENST00000555178 IL17RELQ6ZVW7 336 aa8.75□□□□□ -1.01
TDP1-211ENST00000555178 LYG2Q86SG7 212 aa8.75□□□□□ -1.01
TDP1-211ENST00000555178 OR10A7Q8NGE5 316 aa8.75□□□□□ -1.01
TDP1-211ENST00000555178 SCGB3A2Q96PL1 93 aa8.75□□□□□ -1.01
TDP1-211ENST00000555178 ZNF251Q9BRH9 671 aa8.75□□□□□ -1.01
TDP1-211ENST00000555178 ALX4Q9H161 411 aaPredicted RBP8.75□□□□□ -1.01
TDP1-211ENST00000555178 NAA60Q9H7X0 242 aa8.75□□□□□ -1.01
TDP1-211ENST00000555178 A0A087X0M5 115 aa8.74□□□□□ -1.01
TDP1-211ENST00000555178 A0A1B0GX30 115 aa8.74□□□□□ -1.01
TDP1-211ENST00000555178 A0A1W2PPH5 198 aa8.74□□□□□ -1.01
TDP1-211ENST00000555178 CREBL2O60519 120 aaPredicted RBP8.74□□□□□ -1.01
TDP1-211ENST00000555178 PRAF2O60831 178 aa8.74□□□□□ -1.01
TDP1-211ENST00000555178 TOX4O94842 621 aa8.74□□□□□ -1.01
TDP1-211ENST00000555178 SFT2D2O95562 160 aa8.74□□□□□ -1.01
TDP1-211ENST00000555178 IGHV4-38-2P0DP08 117 aa8.74□□□□□ -1.01
TDP1-211ENST00000555178 CXCL3P19876 107 aa8.74□□□□□ -1.01
TDP1-211ENST00000555178 TAS2R31P59538 309 aa8.74□□□□□ -1.01
TDP1-211ENST00000555178 FCN2Q15485 313 aa8.74□□□□□ -1.01
TDP1-211ENST00000555178 RUSC1-AS1Q66K80 236 aa8.74□□□□□ -1.01
TDP1-211ENST00000555178 LHFPL5Q8TAF8 219 aa8.74□□□□□ -1.01
TDP1-211ENST00000555178 ZNF431Q8TF32 576 aaPredicted RBP8.74□□□□□ -1.01
TDP1-211ENST00000555178 CHAC2Q8WUX2 184 aa8.74□□□□□ -1.01
TDP1-211ENST00000555178 LHX4Q969G2 390 aa8.74□□□□□ -1.01
TDP1-211ENST00000555178 C7orf69Q9H7B7 122 aa8.74□□□□□ -1.01
TDP1-211ENST00000555178 METTL8Q9H825 291 aaKnown RBP8.74□□□□□ -1.01
TDP1-211ENST00000555178 NSD1Q96L73 2696 aaPredicted RBP8.74□□□□□ -1.01
TDP1-211ENST00000555178 M0R1W7 72 aa8.74□□□□□ -1.01
TDP1-211ENST00000555178 M0R1X1 148 aa8.74□□□□□ -1.01
TDP1-211ENST00000555178 CCSO14618 274 aa8.74□□□□□ -1.01
TDP1-211ENST00000555178 SSNA1O43805 119 aa8.74□□□□□ -1.01
TDP1-211ENST00000555178 BRWD1-AS2P59051 145 aa8.74□□□□□ -1.01
TDP1-211ENST00000555178 FBLN7Q53RD9 439 aa8.74□□□□□ -1.01
TDP1-211ENST00000555178 Q71RC1 249 aaPredicted RBP8.74□□□□□ -1.01
TDP1-211ENST00000555178 LHFPL4Q7Z7J7 247 aa8.74□□□□□ -1.01
TDP1-211ENST00000555178 CMTM1Q8IZ96 169 aa8.74□□□□□ -1.01
TDP1-211ENST00000555178 DYNAPQ8N1N2 210 aa8.74□□□□□ -1.01
TDP1-211ENST00000555178 OR11H7Q8NGC8 314 aa8.74□□□□□ -1.01
TDP1-211ENST00000555178 OR10X1Q8NGY0 326 aa8.74□□□□□ -1.01
TDP1-211ENST00000555178 WDR89Q96FK6 387 aaPredicted RBP8.74□□□□□ -1.01
TDP1-211ENST00000555178 ZNF486Q96H40 463 aaPredicted RBP8.74□□□□□ -1.01
TDP1-211ENST00000555178 AJUBAQ96IF1 538 aa8.74□□□□□ -1.01
TDP1-211ENST00000555178 CENPVL3A0A0U1RRI6 287 aa8.73□□□□□ -1.01
TDP1-211ENST00000555178 C3orf85A0A1B0GTC6 90 aa8.73□□□□□ -1.01
TDP1-211ENST00000555178 RAMP3O60896 148 aa8.73□□□□□ -1.01
TDP1-211ENST00000555178 IGLV1-47P01700 117 aa8.73□□□□□ -1.01
TDP1-211ENST00000555178 RBP4P02753 201 aa8.73□□□□□ -1.01
TDP1-211ENST00000555178 PRTN3P24158 256 aa8.73□□□□□ -1.01
TDP1-211ENST00000555178 RND3P61587 244 aa8.73□□□□□ -1.01
TDP1-211ENST00000555178 TMEM30BQ3MIR4 351 aa8.73□□□□□ -1.01
TDP1-211ENST00000555178 LPCAT3Q6P1A2 487 aa8.73□□□□□ -1.01
TDP1-211ENST00000555178 BRD3OSQ6XYD6 125 aa8.73□□□□□ -1.01
TDP1-211ENST00000555178 KCTD9Q7L273 389 aa8.73□□□□□ -1.01
TDP1-211ENST00000555178 SGPP2Q8IWX5 399 aa8.73□□□□□ -1.01
TDP1-211ENST00000555178 PIP4P2Q8N4L2 257 aa8.73□□□□□ -1.01
TDP1-211ENST00000555178 OR4P4Q8NGL7 312 aa8.73□□□□□ -1.01
TDP1-211ENST00000555178 OR9G1Q8NH87 305 aa8.73□□□□□ -1.01
TDP1-211ENST00000555178 GLYATL2Q8WU03 294 aa8.73□□□□□ -1.01
TDP1-211ENST00000555178 CLEC7AQ9BXN2 247 aa8.73□□□□□ -1.01
TDP1-211ENST00000555178 GSX1Q9H4S2 264 aaPredicted RBP8.73□□□□□ -1.01
TDP1-211ENST00000555178 KPTNQ9Y664 436 aa8.73□□□□□ -1.01
TDP1-211ENST00000555178 NAV3Q8IVL0 2385 aa8.73□□□□□ -1.01
TDP1-211ENST00000555178 SIX6O95475 246 aa8.73□□□□□ -1.01
TDP1-211ENST00000555178 IFNA2P01563 188 aa8.73□□□□□ -1.01
TDP1-211ENST00000555178 F2RP25116 425 aa8.73□□□□□ -1.01
TDP1-211ENST00000555178 CD34P28906 385 aa8.73□□□□□ -1.01
TDP1-211ENST00000555178 RAB7AP51149 207 aa8.73□□□□□ -1.01
TDP1-211ENST00000555178 RRAS2P62070 204 aaPredicted RBP8.73□□□□□ -1.01
TDP1-211ENST00000555178 TMEM187Q14656 261 aa8.73□□□□□ -1.01
TDP1-211ENST00000555178 LY6G6FQ5SQ64 297 aa8.73□□□□□ -1.01
TDP1-211ENST00000555178 NCR3LG1Q68D85 454 aa8.73□□□□□ -1.01
TDP1-211ENST00000555178 FAM219AQ8IW50 185 aa8.73□□□□□ -1.01
TDP1-211ENST00000555178 KIR3DL3Q8N743 410 aa8.73□□□□□ -1.01
TDP1-211ENST00000555178 CCDC71LQ8N9Z2 235 aa8.73□□□□□ -1.01
TDP1-211ENST00000555178 MITD1Q8WV92 249 aa8.73□□□□□ -1.01
TDP1-211ENST00000555178 GPN1Q9HCN4 374 aaPredicted RBP8.73□□□□□ -1.01
TDP1-211ENST00000555178 NF1P21359 2839 aa8.73□□□□□ -1.01
TDP1-211ENST00000555178 hCG_1809904A0A1W2PP81 198 aa8.72□□□□□ -1.01
TDP1-211ENST00000555178 A0A1W2PPE2 198 aa8.72□□□□□ -1.01
TDP1-211ENST00000555178 A0A1W2PR64 198 aa8.72□□□□□ -1.01
TDP1-211ENST00000555178 A0A1W2PRV1 198 aa8.72□□□□□ -1.01
TDP1-211ENST00000555178 MPTX1A8MV57 137 aa8.72□□□□□ -1.01
TDP1-211ENST00000555178 SNRPGP15A8MWD9 76 aa8.72□□□□□ -1.01
TDP1-211ENST00000555178 ITGB1BP1O14713 200 aa8.72□□□□□ -1.01
TDP1-211ENST00000555178 RAB29O14966 203 aa8.72□□□□□ -1.01
TDP1-211ENST00000555178 ADAP1O75689 374 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms